Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.6e-35 151.4 70 100.0
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.9e-10 68.2 61 47.5
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.9e-10 68.2 61 47.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 8.5e-10 66.6 59 49.2
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.1e-09 66.2 59 49.2
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.1e-09 66.2 59 45.8
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.1e-09 66.2 59 45.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.5e-09 65.9 59 47.5
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.5e-09 65.9 59 45.8
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.5e-09 65.9 59 49.2
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.9e-09 65.5 59 47.5
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 45.8
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.2e-09 64.7 61 44.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.2e-09 64.7 61 44.3
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 45.8
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 45.8
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 45.8
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 44.1
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.2e-09 64.7 59 44.1
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.2e-09 64.3 59 45.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 4.2e-09 64.3 59 44.1
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 4.2e-09 64.3 59 45.8
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 4.2e-09 64.3 59 45.8
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 4.2e-09 64.3 59 45.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 5.5e-09 63.9 59 45.8
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-09 63.9 57 45.6
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-09 63.9 61 44.3
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 5.5e-09 63.9 59 44.1
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.5e-09 63.9 61 44.3
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 5.5e-09 63.9 59 44.1
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 44.1
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 44.1
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 45.8
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 47.5
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 45.8
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 7.2e-09 63.5 59 47.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 9.4e-09 63.2 59 44.1
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 9.4e-09 63.2 59 44.1
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 9.4e-09 63.2 59 44.1
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 9.4e-09 63.2 59 45.8
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.2e-08 62.8 59 42.4
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.2e-08 62.8 59 45.8
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.2e-08 62.8 59 44.1
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.2e-08 62.8 59 44.1
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.6e-08 62.4 57 52.6
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.6e-08 62.4 57 52.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.6e-08 62.4 57 52.6
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 1.6e-08 62.4 57 52.6
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.6e-08 62.4 59 44.1
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.6e-08 62.4 59 45.8
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.6e-08 62.4 59 44.1
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.6e-08 62.4 59 45.8
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 45.8
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 42.4
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 42.4
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 44.1
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 42.4
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 44.1
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.1e-08 62.0 59 44.1
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.7e-08 61.6 57 50.9
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 2.7e-08 61.6 62 43.5
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 2.7e-08 61.6 59 44.1
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 2.7e-08 61.6 57 50.9
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 2.7e-08 61.6 57 47.4
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 3.6e-08 61.2 59 42.4
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.6e-08 61.2 59 45.8
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.6e-08 61.2 55 41.8
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 3.6e-08 61.2 60 48.3
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 3.6e-08 61.2 59 42.4
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.6e-08 61.2 57 49.1
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 4.7e-08 60.8 56 46.4
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.7e-08 60.8 59 42.4
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.7e-08 60.8 59 42.4
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 4.7e-08 60.8 57 50.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 4.7e-08 60.8 59 40.7
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 4.7e-08 60.8 53 54.7
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 4.7e-08 60.8 53 54.7
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 6.1e-08 60.5 59 44.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 6.1e-08 60.5 59 42.4
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 6.1e-08 60.5 55 49.1
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 6.1e-08 60.5 59 45.8
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 8.0e-08 60.1 58 50.0
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 42.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 42.4
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 42.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 42.4
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 42.4
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 8.0e-08 60.1 59 44.1
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.0e-07 59.7 59 40.7
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.0e-07 59.7 54 48.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.0e-07 59.7 59 40.7
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.8e-07 58.9 57 49.1
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.8e-07 58.9 57 52.6
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.8e-07 58.9 57 49.1
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.8e-07 58.9 53 52.8
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.3e-07 58.5 59 40.7
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.3e-07 58.5 59 40.7
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 3.0e-07 58.2 57 50.9
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 4.0e-07 57.8 41 56.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 6.7e-07 57.0 45 51.1
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 8.8e-07 56.6 45 51.1
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 9.7e-06 53.1 60 40.0


User provided reference genes

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