Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 3.8e-132 474.9 258 100.0
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 6.5e-39 165.2 229 48.5
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.5e-38 163.3 254 45.3
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 9.4e-38 161.4 230 46.5
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.2e-37 161.0 234 45.3
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 2.1e-37 160.2 218 48.6
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 7.9e-37 158.3 258 49.2
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 1.0e-36 157.9 184 52.2
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.8e-36 157.1 232 45.7
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 8.8e-36 154.8 238 45.0
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.3e-35 152.9 262 42.0
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 4.8e-34 149.1 248 46.8
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.4e-33 147.5 230 47.0
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 5.3e-33 145.6 220 48.6
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 9.1e-33 144.8 198 47.5
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 2.0e-32 143.7 198 49.0
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 5.9e-32 142.1 225 45.3
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 2.9e-31 139.8 211 50.7
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.1e-30 137.9 196 48.5
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.1e-30 137.9 198 49.0
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.9e-30 137.1 233 44.6
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.9e-30 137.1 192 50.5
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.5e-30 136.7 239 43.9
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 3.2e-30 136.3 233 44.6
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 3.2e-30 136.3 233 44.6
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.2e-30 136.3 178 51.7
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 4.2e-30 136.0 179 49.2
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 4.2e-30 136.0 226 48.7
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 7.2e-30 135.2 207 45.4
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 1.2e-29 134.4 203 50.2
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.6e-29 134.0 181 49.7
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.6e-29 134.0 229 45.9
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 2.7e-29 133.3 235 44.7
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 4.7e-29 132.5 202 50.5
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 7.9e-29 131.7 236 45.8
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.0e-28 131.3 198 47.5
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 1.4e-28 131.0 191 45.0
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.8e-28 130.6 203 49.8
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.8e-28 130.6 139 51.8
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 3.0e-28 129.8 225 44.9
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 5.1e-28 129.0 211 41.2
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 6.7e-28 128.6 183 45.4
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.5e-27 127.5 203 44.3
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 3.3e-27 126.3 218 45.9
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 4.4e-27 125.9 181 50.3
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 9.7e-27 124.8 138 54.3
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 9.7e-27 124.8 219 42.9
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 1.7e-26 124.0 156 49.4
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.7e-26 124.0 121 63.6
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 1.7e-26 124.0 206 44.7
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.7e-26 124.0 164 51.2
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 2.2e-26 123.6 149 45.6
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.8e-26 123.2 133 57.9
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.7e-26 122.9 149 53.0
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 3.7e-26 122.9 233 45.1
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 6.3e-26 122.1 175 46.9
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 1.8e-25 120.6 232 39.7
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 3.1e-25 119.8 209 45.0
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 7.0e-25 118.6 169 50.3
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 9.1e-25 118.2 134 56.0
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.2e-24 117.9 102 59.8
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 2.0e-24 117.1 208 43.3
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 2.6e-24 116.7 204 41.2
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 2.6e-24 116.7 212 41.0
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 4.5e-24 115.9 208 43.3
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 7.7e-24 115.2 178 44.4
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.7e-24 115.2 115 60.0
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 7.7e-24 115.2 225 40.4
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.3e-23 114.4 195 44.6
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 2.2e-23 113.6 201 41.3
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 3.8e-23 112.8 108 58.3
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 5.0e-23 112.5 182 41.2
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 5.0e-23 112.5 182 41.2
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.1e-22 111.3 175 41.7
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 1.1e-22 111.3 256 34.8
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 1.5e-22 110.9 197 44.7
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.5e-22 110.9 159 52.2
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 2.5e-22 110.2 183 42.1
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 3.2e-22 109.8 123 52.0
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 3.2e-22 109.8 145 44.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 4.2e-22 109.4 200 39.0
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 5.5e-22 109.0 169 43.2
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 7.2e-22 108.6 158 43.0
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 7.2e-22 108.6 191 39.3
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.2e-21 107.8 242 40.1
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.0e-21 105.1 186 39.8
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.0e-21 105.1 149 43.6
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 1.0e-20 104.8 150 43.3
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.0e-20 104.8 205 39.0
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.4e-20 104.4 148 44.6
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 3.0e-20 103.2 220 38.2
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 3.0e-20 103.2 184 41.3
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 5.2e-20 102.4 205 39.0
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 5.2e-20 102.4 115 53.0
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 6.7e-20 102.1 248 35.9
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 6.7e-20 102.1 193 40.9
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 1.1e-19 101.3 210 38.6
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.7e-18 97.4 252 35.7
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 2.2e-18 97.1 147 47.6
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 1.8e-17 94.0 208 36.5
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.1e-17 93.2 248 37.1
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 7.0e-17 92.0 121 56.2
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 9.1e-17 91.7 88 55.7
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.7e-16 90.1 98 60.2
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 4.5e-16 89.4 135 39.3
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 1.1e-14 84.7 206 34.0
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.5e-14 84.3 176 38.1
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.0e-12 78.2 155 44.5
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 1.8e-12 77.4 115 50.4
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.5e-11 74.3 213 37.6
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.5e-11 74.3 76 51.3
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 2.0e-11 73.9 88 42.0
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 6.3e-10 68.9 96 46.9
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.7e-08 63.5 46 58.7
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 4.5e-08 62.8 102 42.2
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 5.9e-08 62.4 34 82.4
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.3e-07 61.2 64 50.0
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 6.5e-07 58.9 65 44.6
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 1.5e-06 57.8 46 63.0


User provided reference genes

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