Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 1.2e-39 166.0 83 100.0
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 2.3e-22 108.6 81 70.4
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 2.7e-18 95.1 77 62.3
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 5.0e-17 90.9 77 61.0
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 6.5e-17 90.5 83 57.8
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 1.9e-16 89.0 68 64.7
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 3.2e-16 88.2 82 57.3
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 4.2e-16 87.8 83 59.0
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 9.4e-16 86.7 65 66.2
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 1.2e-15 86.3 62 69.4
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 1.2e-15 86.3 74 59.5
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 1.6e-15 85.9 82 56.1
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.1e-15 85.5 83 54.2
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 2.1e-15 85.5 81 55.6
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 2.1e-15 85.5 67 62.7
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 2.7e-15 85.1 77 55.8
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 3.6e-15 84.7 83 54.2
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 4.7e-15 84.3 76 57.9
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 4.7e-15 84.3 79 58.2
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 6.1e-15 84.0 67 61.2
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 2.3e-14 82.0 81 55.6
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 2.3e-14 82.0 77 54.5
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 4.0e-14 81.3 82 54.9
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 4.0e-14 81.3 66 60.6
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 5.2e-14 80.9 77 53.2
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 5.2e-14 80.9 66 60.6
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 6.8e-14 80.5 75 57.3
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 6.8e-14 80.5 58 65.5
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 8.8e-14 80.1 77 53.2
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 1.5e-13 79.3 77 55.8
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 1.5e-13 79.3 70 57.1
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 2.0e-13 79.0 77 53.2
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 2.0e-13 79.0 77 57.1
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 2.0e-13 79.0 68 61.8
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 3.4e-13 78.2 81 54.3
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 4.4e-13 77.8 83 54.2
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 4.4e-13 77.8 83 54.2
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 4.4e-13 77.8 92 48.9
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 4.4e-13 77.8 78 56.4
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 7.5e-13 77.0 63 60.3
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 9.8e-13 76.6 66 57.6
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 1.3e-12 76.3 83 53.0
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 1.7e-12 75.9 60 61.7
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 1.7e-12 75.9 81 50.6
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 1.7e-12 75.9 59 62.7
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 2.2e-12 75.5 77 54.5
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 2.2e-12 75.5 90 53.3
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 2.8e-12 75.1 77 54.5
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 2.8e-12 75.1 58 63.8
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 2.8e-12 75.1 70 60.0
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 4.8e-12 74.3 65 55.4
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 6.3e-12 73.9 57 64.9
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 1.1e-11 73.2 72 50.0
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 1.1e-11 73.2 62 56.5
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 4.1e-11 71.2 81 49.4
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 4.1e-11 71.2 61 63.9
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 4.1e-11 71.2 57 64.9
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 5.4e-11 70.9 70 51.4
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 5.4e-11 70.9 70 51.4
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 5.4e-11 70.9 81 50.6
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 7.0e-11 70.5 79 49.4
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 9.1e-11 70.1 70 50.0
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 5.9e-10 67.4 66 50.0
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 1.0e-09 66.6 81 45.7
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 1.0e-09 66.6 66 51.5
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 1.0e-09 66.6 71 46.5
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 1.7e-09 65.9 82 43.9
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 1.7e-09 65.9 66 53.0
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 1.7e-09 65.9 77 49.4
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 2.2e-09 65.5 81 49.4
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 2.2e-09 65.5 72 47.2
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 2.2e-09 65.5 73 49.3
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 2.2e-09 65.5 58 53.4
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 2.9e-09 65.1 77 48.1
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 5.0e-09 64.3 82 42.7
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 8.5e-09 63.5 66 50.0
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 8.5e-09 63.5 72 45.8
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 1.1e-08 63.2 82 41.5
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 1.1e-08 63.2 66 47.0
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 1.5e-08 62.8 82 41.5
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 1.9e-08 62.4 61 49.2
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 1.9e-08 62.4 64 48.4
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 2.5e-08 62.0 46 63.0
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 2.5e-08 62.0 46 65.2
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 3.2e-08 61.6 66 47.0
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 4.2e-08 61.2 61 52.5
COL.COLO4_11560 Corchorus olitorius HOM05D007513 ORTHO05D008148 5.5e-08 60.8 89 41.6
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 7.2e-08 60.5 59 52.5
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 7.2e-08 60.5 64 46.9
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 1.2e-07 59.7 44 63.6
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 2.7e-07 58.5 67 47.8
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 4.7e-07 57.8 61 49.2
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 6.1e-07 57.4 66 45.5
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 8.0e-07 57.0 53 54.7
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 8.0e-07 57.0 66 50.0
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 1.0e-06 56.6 70 42.9
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 1.8e-06 55.8 60 43.3
Lj6g0007185 Lotus japonicus HOM05D007513 ORTHO05D008148 4.0e-06 54.7 68 44.1
A03p65340 Brassica napus HOM05D014277 ORTHO05D008148 8.8e-06 53.5 68 42.6
BraA03t15588Z Brassica rapa HOM05D014277 ORTHO05D008148 8.8e-06 53.5 68 42.6


User provided reference genes

Program Settings