Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 7.5e-42 173.3 81 100.0
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 7.5e-42 173.3 81 100.0
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.4e-16 89.4 64 67.2
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.4e-16 89.4 64 70.3
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.4e-16 88.6 62 71.0
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.2e-15 86.3 65 66.2
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 3.5e-15 84.7 62 66.1
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 6.0e-15 84.0 65 64.6
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.0e-14 83.2 65 61.5
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.7e-14 82.4 66 59.1
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.0e-14 81.6 65 58.5
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.0e-14 81.6 66 59.1
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.0e-14 81.6 65 60.0
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.9e-14 81.3 66 57.6
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 5.0e-14 80.9 65 63.1
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 6.6e-14 80.5 65 61.5
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 6.6e-14 80.5 65 61.5
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.1e-13 79.7 65 61.5
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.1e-13 79.7 65 58.5
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 1.1e-13 79.7 65 60.0
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.5e-13 79.3 65 58.5
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.5e-13 79.3 65 58.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 2.5e-13 78.6 65 60.0
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.5e-13 78.6 62 59.7
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 2.5e-13 78.6 64 59.4
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.3e-13 78.2 65 58.5
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.3e-13 78.2 65 58.5
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 3.3e-13 78.2 65 56.9
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 3.3e-13 78.2 65 60.0
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.3e-13 77.8 65 56.9
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 5.6e-13 77.4 65 60.0
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 5.6e-13 77.4 65 58.5
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.6e-13 77.4 65 58.5
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 5.6e-13 77.4 65 58.5
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 5.6e-13 77.4 65 60.0
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 9.5e-13 76.6 65 56.9
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.2e-12 76.3 65 58.5
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.2e-12 76.3 65 55.4
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 1.6e-12 75.9 64 60.9
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 1.6e-12 75.9 65 56.9
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 2.1e-12 75.5 62 59.7
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 2.1e-12 75.5 65 56.9
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 3.6e-12 74.7 65 56.9
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 4.7e-12 74.3 65 55.4
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 4.7e-12 74.3 65 52.3
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 6.2e-12 73.9 65 56.9
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 8.1e-12 73.6 65 53.8
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 1.1e-11 73.2 64 56.2
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.1e-11 73.2 65 55.4
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 1.4e-11 72.8 65 53.8
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.4e-11 72.8 62 54.8
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.8e-11 72.4 62 53.2
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.8e-11 72.4 62 53.2
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 1.8e-11 72.4 60 58.3
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 1.8e-11 72.4 62 53.2
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 2.3e-11 72.0 64 53.1
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 2.3e-11 72.0 64 53.1
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 2.3e-11 72.0 62 54.8
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.3e-11 72.0 65 49.2
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 2.3e-11 72.0 66 54.5
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 2.3e-11 72.0 65 52.3
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 3.1e-11 71.6 64 51.6
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.1e-11 71.6 69 56.5
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 3.1e-11 71.6 64 54.7
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 4.0e-11 71.2 64 51.6
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.0e-11 71.2 64 54.7
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 4.0e-11 71.2 62 51.6
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 5.2e-11 70.9 65 53.8
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 5.2e-11 70.9 62 53.2
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 5.2e-11 70.9 64 54.7
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 8.9e-11 70.1 66 56.1
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 8.9e-11 70.1 65 50.8
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 8.9e-11 70.1 65 50.8
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 8.9e-11 70.1 62 50.0
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 8.9e-11 70.1 65 56.9
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 8.9e-11 70.1 65 50.8
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 1.2e-10 69.7 62 48.4
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.5e-10 69.3 62 53.2
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 2.0e-10 68.9 65 50.8
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 2.6e-10 68.6 65 52.3
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.6e-10 68.6 65 49.2
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 2.6e-10 68.6 62 50.0
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.4e-10 68.2 65 49.2
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 3.4e-10 68.2 65 49.2
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 49.2
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 53.8
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 55.4
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 55.4
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 55.4
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.4e-10 67.8 65 55.4
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 5.8e-10 67.4 69 52.2
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 5.8e-10 67.4 65 47.7
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 5.8e-10 67.4 65 52.3
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.3e-09 66.2 65 53.8
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 1.7e-09 65.9 64 50.0
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.2e-09 65.5 65 47.7
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 3.7e-09 64.7 66 50.0
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 3.7e-09 64.7 65 49.2
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 4.9e-09 64.3 64 48.4
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.1e-08 63.2 65 53.8
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 1.1e-08 63.2 66 47.0
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 1.1e-08 63.2 62 48.4
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 1.1e-08 63.2 65 52.3
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.9e-08 62.4 65 47.7
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 5.4e-08 60.8 61 50.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 9.2e-08 60.1 65 44.6
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.6e-07 59.3 65 40.0
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 2.1e-07 58.9 65 38.5
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 2.7e-07 58.5 65 40.0
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.7e-07 58.5 65 41.5
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 2.7e-07 58.5 65 40.0
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 2.7e-07 58.5 71 46.5
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.5e-07 58.2 65 38.5
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 4.6e-07 57.8 65 44.6
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 7.8e-07 57.0 65 41.5
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 7.8e-07 57.0 67 40.3
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 1.3e-06 56.2 65 38.5
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 3.9e-06 54.7 43 58.1
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 8.6e-06 53.5 65 38.5
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 8.6e-06 53.5 65 38.5


User provided reference genes

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