Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 0.0e+00 1101.3 568 100.0
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 1.5e-112 411.0 350 63.1
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.5e-112 411.0 366 60.7
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 2.5e-112 410.2 347 64.8
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.9e-107 394.0 349 60.7
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 2.3e-105 387.1 350 58.3
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 2.3e-105 387.1 359 57.1
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 9.7e-104 381.7 347 59.1
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.3e-103 381.3 346 58.7
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 2.0e-101 374.0 351 57.5
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 2.6e-101 373.6 348 57.5
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.3e-100 371.3 348 57.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 2.9e-100 370.2 347 56.8
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 3.8e-100 369.8 347 56.5
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.1e-99 368.2 350 59.1
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 1.2e-98 364.8 349 57.6
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.0e-98 362.1 369 54.2
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.8e-97 360.9 351 53.8
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 1.5e-96 357.8 347 56.2
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.0e-96 357.5 372 53.5
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 2.6e-96 357.1 355 55.2
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.6e-96 357.1 353 53.5
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.7e-95 354.4 353 55.8
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 3.7e-95 353.2 357 56.3
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 1.1e-94 351.7 352 53.7
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.4e-94 351.3 376 52.4
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 2.4e-94 350.5 349 53.0
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 4.1e-94 349.7 351 53.3
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.0e-93 347.4 356 55.1
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 2.0e-93 347.4 343 53.6
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 3.5e-93 346.7 349 52.7
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 7.7e-93 345.5 343 53.1
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 3.8e-92 343.2 351 51.3
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 4.2e-91 339.7 349 52.1
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 8.0e-90 335.5 348 52.9
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 4.0e-89 333.2 354 51.7
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.5e-88 331.3 344 52.9
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 2.6e-88 330.5 352 51.1
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 1.7e-87 327.8 351 51.9
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.4e-86 324.7 376 48.4
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 7.7e-85 318.9 345 50.7
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 1.3e-84 318.2 313 53.7
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.7e-84 317.8 399 46.9
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 5.0e-84 316.2 350 48.6
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 8.5e-84 315.5 493 42.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 1.9e-83 314.3 392 45.4
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 3.2e-83 313.5 381 48.3
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 5.5e-83 312.8 310 54.5
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 1.6e-82 311.2 350 47.7
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 1.6e-82 311.2 350 47.7
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.1e-82 310.8 352 50.9
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.7e-82 310.5 350 48.0
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 4.7e-82 309.7 350 48.9
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.0e-81 308.5 350 48.9
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.3e-81 307.4 357 47.3
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 8.8e-81 305.4 349 49.6
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 2.0e-80 304.3 368 48.1
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.4e-80 303.5 366 45.6
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 1.3e-79 301.6 349 48.1
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.3e-79 301.6 350 50.3
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 4.8e-79 299.7 407 44.7
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 1.1e-78 298.5 368 49.5
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.8e-78 297.7 365 50.1
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 9.1e-78 295.4 389 45.5
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 1.3e-76 291.6 348 48.3
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.7e-76 291.2 352 47.7
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 3.8e-76 290.0 346 48.8
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 6.6e-76 289.3 294 55.4
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 2.5e-75 287.3 401 42.1
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 4.2e-75 286.6 379 44.6
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 6.1e-74 282.7 307 48.9
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.8e-73 281.2 384 43.2
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 5.2e-73 279.6 377 44.8
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 6.8e-73 279.3 355 44.8
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.0e-72 277.7 355 43.7
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.6e-72 277.3 392 42.6
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.6e-72 277.3 298 49.3
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.7e-71 274.6 350 46.0
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.2e-71 274.2 350 45.7
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 3.7e-71 273.5 311 48.6
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 7.0e-70 269.2 362 43.4
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 5.6e-67 259.6 431 38.7
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.6e-66 258.1 360 43.3
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 4.7e-66 256.5 283 51.6
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 3.1e-65 253.8 349 45.3
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 2.2e-63 247.7 327 45.3
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.3e-63 245.7 307 46.9
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.3e-63 245.7 307 46.9
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.9e-62 244.6 399 37.3
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 8.6e-52 209.1 350 39.1
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.5e-51 207.6 153 64.7
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 3.3e-51 207.2 279 44.8
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.3e-49 201.1 350 37.4
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.1e-46 192.2 160 55.6
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.1e-46 192.2 233 44.2
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 6.8e-41 172.9 142 54.9
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.5e-40 171.8 402 33.6
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.9e-35 154.8 125 55.2
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 9.0e-33 146.0 282 36.2
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.7e-31 141.7 170 47.6
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.7e-31 141.7 159 49.1
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.4e-25 121.3 126 53.2
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 5.3e-25 120.2 357 26.3
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.3e-23 115.5 114 54.4
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.1e-22 112.5 168 41.7
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 4.2e-22 110.5 158 40.5
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 1.0e-15 89.4 144 41.7
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.7e-15 88.6 64 64.1
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.7e-15 88.6 64 64.1
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 1.1e-09 69.3 208 22.1
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 1.2e-08 65.9 95 46.3


User provided reference genes

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