Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 0.0e+00 1347.8 689 100.0
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 4.0e-301 1037.7 695 77.3
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.5e-300 1035.8 689 77.1
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 1.6e-289 999.2 672 77.8
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 1.6e-289 999.2 672 77.8
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.5e-289 998.0 690 74.8
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 1.7e-288 995.7 701 74.9
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 9.4e-287 989.9 687 75.7
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 4.7e-286 987.6 697 74.5
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 6.1e-286 987.3 708 74.2
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.8e-283 978.4 693 75.0
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 8.3e-283 976.9 696 74.4
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 2.3e-280 968.8 680 75.3
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 6.6e-280 967.2 705 72.3
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 3.0e-277 958.4 691 71.9
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 5.2e-277 957.6 710 70.6
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 5.2e-277 957.6 691 72.1
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.5e-276 956.1 676 73.4
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 5.7e-276 954.1 717 70.9
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.9e-275 951.8 714 70.7
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.4e-274 948.7 703 71.3
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 7.0e-274 947.2 718 69.1
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.0e-272 943.3 706 70.5
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 2.3e-272 942.2 675 73.3
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 3.9e-272 941.4 706 69.4
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 5.0e-272 941.0 708 70.5
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 6.6e-272 940.6 704 70.6
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 6.6e-272 940.6 710 70.4
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.1e-271 939.9 700 70.4
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.5e-271 939.5 704 70.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.5e-271 939.5 709 69.0
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.9e-271 939.1 674 72.0
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.9e-271 939.1 665 74.1
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 2.5e-271 938.7 708 69.8
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 3.3e-271 938.3 709 70.2
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 9.5e-271 936.8 705 69.8
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.6e-270 936.0 703 70.1
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 1.6e-270 936.0 696 70.3
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.8e-270 935.3 706 69.3
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 2.8e-270 935.3 706 70.4
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 4.7e-270 934.5 695 72.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 4.7e-270 934.5 713 69.7
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 6.2e-270 934.1 701 70.8
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 2.3e-269 932.2 692 70.4
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 4.4e-268 927.9 672 71.3
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 4.4e-268 927.9 674 71.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 9.8e-268 926.8 709 70.0
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 9.8e-268 926.8 675 71.0
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 8.3e-267 923.7 679 71.3
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.9e-266 922.5 745 66.2
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 4.1e-266 921.4 669 71.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.1e-266 921.4 673 71.2
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 5.4e-266 921.0 695 70.6
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.0e-266 920.6 659 72.1
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.0e-266 920.6 673 71.0
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.2e-265 919.8 674 71.5
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.2e-265 919.8 678 71.4
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-265 919.5 678 70.8
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 3.5e-265 918.3 669 71.3
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 6.0e-265 917.5 705 69.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 7.8e-265 917.1 670 71.0
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.3e-263 911.8 668 69.9
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 5.6e-263 911.0 708 68.6
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.2e-262 909.8 681 69.3
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 2.8e-262 908.7 725 67.6
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 2.3e-261 905.6 674 70.0
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.5e-260 902.9 671 69.4
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 2.0e-260 902.5 675 70.1
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 7.5e-260 900.6 707 67.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 3.7e-259 898.3 692 68.9
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 2.4e-258 895.6 672 69.8
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 2.1e-257 892.5 698 66.3
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.3e-256 889.8 602 76.6
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 8.9e-253 877.1 727 65.3
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.2e-252 876.7 677 68.7
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 4.9e-251 871.3 687 67.1
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.4e-250 869.8 652 69.6
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.1e-249 865.9 595 73.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.3e-247 858.6 743 62.6
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 5.6e-247 857.8 650 68.0
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.8e-243 845.1 697 66.7
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 3.2e-242 842.0 596 74.2
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 9.6e-239 830.5 688 66.9
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 2.7e-233 812.4 576 73.4
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 9.9e-228 793.9 671 63.6
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.3e-227 793.5 574 72.3
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.0e-224 783.9 593 68.6
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 9.0e-221 770.8 625 64.5
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.1e-213 747.3 612 65.0
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 2.4e-213 746.1 569 68.9
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 3.6e-185 652.5 1279 37.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 2.8e-182 642.9 600 56.2
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 6.3e-182 641.7 672 52.1
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 2.4e-181 639.8 622 55.5
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 3.4e-175 619.4 426 75.6
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 4.4e-175 619.0 641 52.0
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 3.0e-168 596.3 401 76.6
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.6e-167 593.2 422 73.7
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 7.8e-156 555.1 402 69.7
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.8e-136 490.7 718 42.3
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 4.3e-130 469.5 474 52.7
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 1.2e-129 468.0 603 45.6
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.9e-126 456.8 332 70.8
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.1e-106 391.7 274 72.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.9e-101 374.4 225 84.0
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.8e-96 357.8 461 48.6
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 5.5e-93 346.3 313 62.3
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.5e-90 338.2 284 64.1
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 4.8e-81 306.6 204 77.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 4.2e-77 293.5 270 61.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.7e-76 290.0 204 74.5
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 3.9e-75 287.0 277 60.3
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.7e-73 280.4 606 35.5
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.1e-56 223.8 156 73.1
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.2e-51 206.8 157 66.2
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.5e-42 178.7 144 65.3
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 3.0e-38 164.5 204 52.5
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.4e-32 145.6 103 71.8
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.3e-25 122.5 142 53.5
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.4e-24 119.0 136 50.7
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 5.1e-22 110.5 132 53.8
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.2e-18 99.4 104 45.2
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 6.4e-17 93.6 68 66.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 1.6e-15 89.0 53 75.5
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 2.1e-15 88.6 80 60.0
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 4.9e-09 67.4 103 41.7


User provided reference genes

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