Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03348 Aquilegia oxysepala HOM05D007008 ORTHO05D008622 2.3e-108 395.6 197 100.0
QL02p018585 Quercus lobata HOM05D007008 ORTHO05D008622 1.7e-47 193.4 100 90.0
CDE05G1515 Ceratophyllum demersum HOM05D007008 ORTHO05D008622 3.2e-46 189.1 107 83.2
Manes.03G007600 Manihot esculenta HOM05D007008 ORTHO05D008622 3.2e-46 189.1 100 87.0
Nn2g14020 Nelumbo nucifera HOM05D007008 ORTHO05D008622 7.1e-46 188.0 100 88.0
CAN.G906.10 Capsicum annuum HOM05D007008 ORTHO05D008622 9.3e-46 187.6 104 84.6
MSTRG.13965 Avicennia marina HOM05D007008 ORTHO05D008622 2.7e-45 186.0 100 87.0
Nn8g40044 Nelumbo nucifera HOM05D007008 ORTHO05D008622 2.7e-45 186.0 100 87.0
CANSAT25G2981 Cannabis sativa HOM05D007008 ORTHO05D008622 3.5e-45 185.7 100 84.0
Rhsim02G0211800 Rhododendron simsii HOM05D007008 ORTHO05D008622 3.5e-45 185.7 100 85.0
Solyc08g006700.3 Solanum lycopersicum HOM05D007008 ORTHO05D008622 3.5e-45 185.7 104 84.6
PGSC0003DMG400026283 Solanum tuberosum HOM05D007008 ORTHO05D008622 3.5e-45 185.7 104 84.6
CiPaw.08G005100 Carya illinoinensis HOM05D007008 ORTHO05D008622 6.0e-45 184.9 100 86.0
Sed0015687 Sechium edule HOM05D007008 ORTHO05D008622 6.0e-45 184.9 103 82.5
TAR626G0196 Trochodendron aralioides HOM05D007008 ORTHO05D008622 6.0e-45 184.9 110 81.8
THA.LOC104799029 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 7.9e-45 184.5 104 83.7
Duzib168G0569 Durio zibethinus HOM05D007008 ORTHO05D008622 1.0e-44 184.1 106 82.1
Ciclev10009999m.g Citrus clementina HOM05D007008 ORTHO05D008622 1.3e-44 183.7 100 85.0
Eucgr.C04041 Eucalyptus grandis HOM05D007008 ORTHO05D008622 1.3e-44 183.7 100 84.0
SGA_v2.0_scaffold169G38605 Striga asiatica HOM05D007008 ORTHO05D008622 2.3e-44 183.0 100 86.0
Duzib187G1435 Durio zibethinus HOM05D007008 ORTHO05D008622 3.0e-44 182.6 100 84.0
FAN15G2831 Fragaria x ananassa HOM05D000756 ORTHO05D008622 3.0e-44 182.6 100 85.0
FAN27G1693 Fragaria x ananassa HOM05D007008 ORTHO05D008622 3.0e-44 182.6 100 85.0
Gohir.D06G104200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 3.0e-44 182.6 100 84.0
Thecc.09G014400 Theobroma cacao HOM05D007008 ORTHO05D008622 3.0e-44 182.6 100 84.0
TWI34G0293 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 3.0e-44 182.6 101 83.2
Manes.16G130900 Manihot esculenta HOM05D007008 ORTHO05D008622 3.9e-44 182.2 100 83.0
Migut.A00362 Erythranthe guttata HOM05D007008 ORTHO05D008622 5.1e-44 181.8 100 84.0
Duzib150G0558 Durio zibethinus HOM05D007008 ORTHO05D008622 6.7e-44 181.4 100 84.0
FvH4_2g41220 Fragaria vesca HOM05D007008 ORTHO05D008622 6.7e-44 181.4 100 84.0
Prupe.1G395400 Prunus persica HOM05D007008 ORTHO05D008622 6.7e-44 181.4 100 83.0
Gohir.A06G102300 Gossypium hirsutum HOM05D007008 ORTHO05D008622 8.7e-44 181.0 100 83.0
MD08G1054800 Malus domestica HOM05D007008 ORTHO05D008622 8.7e-44 181.0 100 83.0
THA.LOC104824959 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 8.7e-44 181.0 105 81.0
PSO170G4073 Papaver somniferum HOM05D007008 ORTHO05D008622 1.1e-43 180.6 105 81.0
HanXRQChr03g0081451 Helianthus annuus HOM05D007008 ORTHO05D008622 1.9e-43 179.9 109 78.0
Oeu048545.1 Olea europaea HOM05D007008 ORTHO05D008622 1.9e-43 179.9 100 82.0
PSO357G0206 Papaver somniferum HOM05D007008 ORTHO05D008622 1.9e-43 179.9 104 81.7
Atru.chr7.2552 Acer truncatum HOM05D007008 ORTHO05D008622 2.5e-43 179.5 100 82.0
SGA_v2.0_scaffold4G02166 Striga asiatica HOM05D007008 ORTHO05D008622 2.5e-43 179.5 100 84.0
AT5G10810 Arabidopsis thaliana HOM05D007008 ORTHO05D008622 3.3e-43 179.1 102 78.4
AL6G21390 Arabidopsis lyrata HOM05D007008 ORTHO05D008622 4.3e-43 178.7 102 77.5
MD15G1042200 Malus domestica HOM05D007008 ORTHO05D008622 4.3e-43 178.7 100 82.0
Rhsim02G0210500 Rhododendron simsii HOM05D007008 ORTHO05D008622 4.3e-43 178.7 109 78.9
RcHm_v2.0_Chr6g0299291 Rosa chinensis HOM05D007008 ORTHO05D008622 4.3e-43 178.7 100 82.0
TAR383G0422 Trochodendron aralioides HOM05D007008 ORTHO05D008622 4.3e-43 178.7 101 81.2
Sed0013935 Sechium edule HOM05D007008 ORTHO05D008622 7.4e-43 177.9 100 81.0
MSTRG.11785 Avicennia marina HOM05D007008 ORTHO05D008622 1.3e-42 177.2 100 82.0
AUR62024793 Chenopodium quinoa HOM05D007008 ORTHO05D008622 1.3e-42 177.2 99 81.8
Glyma.17G224100 Glycine max HOM05D007008 ORTHO05D008622 1.3e-42 177.2 100 81.0
TWI32G0141 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 2.8e-42 176.0 101 78.2
Carub.0006s0932 Capsella rubella HOM05D007008 ORTHO05D008622 6.2e-42 174.9 106 74.5
Phvul.001G040900 Phaseolus vulgaris HOM05D007008 ORTHO05D008622 6.2e-42 174.9 100 80.0
EL10Ac2g02486 Beta vulgaris HOM05D007008 ORTHO05D008622 8.2e-42 174.5 99 80.8
Eucgr.L00629 Eucalyptus grandis HOM05D007008 ORTHO05D008622 8.2e-42 174.5 111 75.7
Oeu006861.2 Olea europaea HOM05D007008 ORTHO05D008622 8.2e-42 174.5 100 79.0
Gohir.A07G033600 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.4e-41 173.7 100 80.0
Gohir.D07G037200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.4e-41 173.7 100 80.0
Gorai.001G038800 Gossypium raimondii HOM05D007008 ORTHO05D008622 1.4e-41 173.7 100 80.0
Potri.018G017300 Populus trichocarpa HOM05D007008 ORTHO05D008622 1.4e-41 173.7 100 82.0
Glyma.14G101000 Glycine max HOM05D007008 ORTHO05D008622 1.8e-41 173.3 100 80.0
Sopen08g002640 Solanum pennellii HOM05D007008 ORTHO05D008622 2.4e-41 172.9 96 85.4
BolC2t06426H Brassica oleracea HOM05D000238 ORTHO05D001043 3.1e-41 172.6 149 59.1
BraA10t44733Z Brassica rapa HOM05D000238 ORTHO05D002998 3.1e-41 172.6 148 60.1
HanXRQChr17g0538991 Helianthus annuus HOM05D007008 ORTHO05D008622 3.1e-41 172.6 100 79.0
BcaB08g37301 Brassica carinata HOM05D000238 ORTHO05D008622 4.0e-41 172.2 107 72.9
CARHR202480 Cardamine hirsuta HOM05D007008 ORTHO05D008622 5.3e-41 171.8 105 74.3
Potri.006G265600 Populus trichocarpa HOM05D007008 ORTHO05D008622 5.3e-41 171.8 100 81.0
Lj5g0019856 Lotus japonicus HOM05D007008 ORTHO05D008622 6.9e-41 171.4 103 78.6
BraA02t05052Z Brassica rapa HOM05D000238 ORTHO05D001043 9.0e-41 171.0 148 58.8
Thhalv10016011m.g Eutrema salsugineum HOM05D007008 ORTHO05D008622 9.0e-41 171.0 105 74.3
Lalb_Chr22g0361631 Lupinus albus HOM05D007008 ORTHO05D008622 9.0e-41 171.0 107 72.9
BolC9t59417H Brassica oleracea HOM05D000238 ORTHO05D001043 1.2e-40 170.6 148 59.5
ECA240G3080 Erigeron canadensis HOM05D007008 ORTHO05D008622 1.2e-40 170.6 109 74.3
Sabra06G0208200 Salix brachista HOM05D007008 ORTHO05D008622 1.5e-40 170.2 101 79.2
A02p00680 Brassica napus HOM05D000653 ORTHO05D002177 2.6e-40 169.5 102 71.6
C02p04680 Brassica napus HOM05D000653 ORTHO05D002177 2.6e-40 169.5 108 70.4
arahy.Tifrunner.gnm1.ann1.ENRJ0V Arachis hypogaea HOM05D007008 ORTHO05D008622 4.5e-40 168.7 100 76.0
arahy.Tifrunner.gnm1.ann1.K1H867 Arachis hypogaea HOM05D007008 ORTHO05D008622 4.5e-40 168.7 100 75.0
Aa31LG3G16290 Aethionema arabicum HOM05D007008 ORTHO05D008622 5.8e-40 168.3 102 69.6
Sabra18G0020700 Salix brachista HOM05D007008 ORTHO05D008622 5.8e-40 168.3 104 78.8
Zm00001eb184500 Zea mays HOM05D007008 ORTHO05D008622 7.6e-40 167.9 100 75.0
Glyma.04G060200 Glycine max HOM05D007008 ORTHO05D008622 1.0e-39 167.5 99 76.8
Glyma.06G060700 Glycine max HOM05D007008 ORTHO05D008622 1.0e-39 167.5 100 76.0
BcaC03g13334 Brassica carinata HOM05D000653 ORTHO05D002177 2.2e-39 166.4 107 70.1
Medtr1g014230 Medicago truncatula HOM05D007008 ORTHO05D008622 2.2e-39 166.4 103 73.8
PGR044G1005 Punica granatum HOM05D007008 ORTHO05D008622 2.2e-39 166.4 99 80.8
GSVIVG01035984001 Vitis vinifera HOM05D007008 ORTHO05D008622 2.9e-39 166.0 92 82.6
BcaNung06639 Brassica carinata HOM05D000653 ORTHO05D008622 5.0e-39 165.2 117 63.2
C09p65940 Brassica napus HOM05D007008 ORTHO05D008622 5.0e-39 165.2 106 69.8
Hund02976 Selenicereus undatus HOM05D007008 ORTHO05D008622 6.5e-39 164.9 99 74.7
Lsat_1_v5_gn_5_62001 Lactuca sativa HOM05D007008 ORTHO05D008622 7.1e-38 161.4 93 79.6
Zm00001eb078360 Zea mays HOM05D007008 ORTHO05D008622 7.1e-38 161.4 100 69.0
Mapoly0112s0015 Marchantia polymorpha HOM05D007008 ORTHO05D008622 1.2e-37 160.6 101 70.3
TPR.G38860 Trifolium pratense HOM05D007008 ORTHO05D008622 3.5e-37 159.1 106 68.9
Cc11_g00350 Coffea canephora HOM05D007008 ORTHO05D008622 4.6e-37 158.7 92 79.3
SMO367G1120 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 6.7e-36 154.8 100 69.0
AagrBONN_evm.TU.Sc2ySwM_344.3123 Anthoceros agrestis HOM05D007008 ORTHO05D008622 1.8e-33 146.7 100 67.0
CBR_g34568 Chara braunii HOM05D007008 ORTHO05D008622 3.1e-33 146.0 92 71.7
Pp3c15_19100 Physcomitrium patens HOM05D007008 ORTHO05D008622 1.7e-31 140.2 102 59.8
CSS0004043 Camellia sinensis var. sinensis HOM05D007008 ORTHO05D008622 8.5e-31 137.9 73 89.0
Pp3c9_4080 Physcomitrium patens HOM05D007008 ORTHO05D008622 8.5e-31 137.9 100 59.0
MCO13G493 Micromonas commoda HOM05D007008 ORTHO05D008622 1.1e-30 137.5 99 56.6
CiPaw.07G231200 Carya illinoinensis HOM05D007008 ORTHO05D008622 1.4e-30 137.1 69 89.9
SMO197G0113 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 7.2e-30 134.8 102 54.9
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 9.4e-30 134.4 80 78.8
MELO3C030305.2 Cucumis melo HOM05D007008 ORTHO05D008622 3.6e-29 132.5 73 84.9
Gorai.010G119400 Gossypium raimondii HOM05D007008 ORTHO05D008622 3.6e-29 132.5 73 84.9
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 1.8e-28 130.2 74 82.4
AUR62032427 Chenopodium quinoa HOM05D007008 ORTHO05D008622 1.1e-27 127.5 71 83.1
Ah.12g060690 Amaranthus hybridus HOM05D007008 ORTHO05D008622 4.3e-27 125.6 71 81.7
PRCOL_00001314 Prasinoderma coloniale HOM05D007008 ORTHO05D008622 4.3e-27 125.6 99 54.5
Sp6g32640 Schrenkiella parvula HOM05D000653 ORTHO05D002177 5.7e-27 125.2 91 64.8
arahy.Tifrunner.gnm1.ann1.T6XV8N Arachis hypogaea HOM05D007008 ORTHO05D008622 7.4e-27 124.8 80 68.8
Psat6g026400 Pisum sativum HOM05D007008 ORTHO05D008622 1.3e-26 124.0 76 72.4
Hund25613 Selenicereus undatus HOM05D007008 ORTHO05D008622 3.1e-25 119.4 72 76.4
SEGI_13302 Sequoiadendron giganteum HOM05D007008 ORTHO05D008622 1.2e-24 117.5 71 74.6
Os04g0499200 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 2.0e-24 116.7 76 65.8
Thecc.02G190100 Theobroma cacao HOM05D007008 ORTHO05D008622 6.7e-20 101.7 103 54.4
Thecc.02G024500 Theobroma cacao HOM05D007008 ORTHO05D008622 2.6e-19 99.8 64 75.0
Thecc.01G194900 Theobroma cacao HOM05D007008 ORTHO05D008622 4.8e-18 95.5 64 75.0
Os02g0611450 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 8.0e-13 78.2 54 63.0
Thecc.05G179000 Theobroma cacao HOM05D000477 ORTHO05D000338 9.1e-09 64.7 42 71.4
Thecc.10G152400 Theobroma cacao HOM05D007008 ORTHO05D008622 1.2e-08 64.3 40 72.5
MBI15_g08395_MAGBIO Magnolia biondii HOM05D007008 ORTHO05D008622 1.3e-07 60.8 33 84.8
CsaV3_2G032520 Cucumis sativus L. HOM05D000653 ORTHO05D002177 4.2e-06 55.8 43 62.8


User provided reference genes

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