Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.3e-265 917.9 499 100.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 5.6e-180 634.8 504 70.2
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 2.4e-175 619.4 513 67.8
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.7e-173 613.2 500 65.6
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 4.3e-172 608.6 503 65.4
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 8.1e-171 604.4 499 64.3
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 1.1e-170 604.0 514 65.2
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 6.8e-170 601.3 512 61.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 8.9e-170 600.9 496 66.3
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 2.0e-169 599.7 508 63.0
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.2e-168 596.3 500 63.4
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 4.9e-168 595.1 499 63.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 6.4e-168 594.7 503 64.8
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.1e-167 594.0 499 63.1
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.1e-167 594.0 499 63.1
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.4e-167 593.6 500 66.4
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.6e-166 590.1 499 63.1
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.6e-166 590.1 504 62.9
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 3.5e-166 589.0 501 63.5
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.9e-164 583.2 500 61.2
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 7.3e-164 581.3 499 61.3
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 9.6e-164 580.9 501 61.7
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.8e-163 579.3 500 64.2
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 4.8e-163 578.6 499 62.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.8e-162 576.6 498 61.2
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 2.4e-162 576.2 500 61.6
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 3.1e-162 575.9 503 61.2
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 9.0e-162 574.3 501 61.7
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.5e-161 573.5 499 61.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.4e-161 572.4 491 62.5
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 4.4e-161 572.0 498 61.0
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 4.4e-161 572.0 503 60.8
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 9.9e-161 570.9 500 62.2
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 4.2e-159 565.5 498 61.0
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 9.3e-159 564.3 500 59.6
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 1.6e-158 563.5 504 60.5
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 6.0e-158 561.6 511 62.0
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.7e-157 560.1 499 60.1
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.7e-157 560.1 501 59.7
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 3.9e-157 558.9 508 59.8
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 5.6e-156 555.1 499 58.9
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.8e-155 552.7 500 59.6
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 6.2e-155 551.6 501 60.1
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 2.4e-154 549.7 500 59.4
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.4e-154 549.7 501 59.7
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 9.0e-154 547.7 500 62.2
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 9.9e-153 544.3 503 58.6
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.9e-152 542.7 501 58.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.9e-152 542.7 501 58.5
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.4e-151 540.4 501 59.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 1.9e-151 540.0 499 57.9
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.6e-150 537.0 501 59.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 6.0e-150 535.0 501 58.3
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 1.3e-149 533.9 522 57.7
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.8e-149 533.5 501 58.3
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 2.3e-149 533.1 499 58.1
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.9e-148 530.0 511 60.7
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.5e-148 529.6 518 57.7
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.5e-148 529.6 524 56.9
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 2.1e-147 526.6 550 54.9
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.8e-147 526.2 500 57.6
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 3.7e-147 525.8 501 57.5
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 1.8e-146 523.5 507 60.6
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 5.3e-146 521.9 527 55.6
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.5e-145 520.4 504 59.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 5.8e-145 518.5 518 57.7
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.2e-144 516.5 507 56.4
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 4.9e-144 515.4 519 58.2
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.7e-142 509.6 506 57.5
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.3e-141 507.3 514 55.6
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.1e-140 504.2 520 54.6
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.5e-140 503.1 511 55.4
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 3.3e-140 502.7 500 56.4
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 3.4e-137 492.7 509 56.0
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.9e-136 489.6 517 58.4
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 7.1e-135 485.0 510 54.9
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.2e-134 484.2 511 55.6
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.3e-133 480.7 545 53.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 8.7e-133 478.0 499 54.1
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.1e-132 477.6 512 53.5
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.5e-132 476.5 527 53.3
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.5e-132 476.5 347 70.9
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.3e-131 474.2 511 57.1
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.0e-129 466.8 510 56.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.2e-128 463.4 508 56.1
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 6.1e-126 455.3 513 53.4
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 7.9e-126 454.9 514 51.8
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.4e-125 454.1 500 53.4
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 2.3e-125 453.4 511 53.2
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 3.0e-125 453.0 511 53.6
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.1e-124 451.1 408 58.8
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 2.4e-122 443.4 496 53.4
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.0e-120 438.0 501 52.9
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 2.6e-113 413.3 365 66.3
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 1.0e-112 411.4 360 65.0
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 4.7e-102 375.9 522 46.7
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.4e-101 374.4 517 44.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 5.2e-101 372.5 332 61.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.4e-100 369.8 502 48.0
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.7e-88 330.9 582 39.2
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.3e-80 304.7 354 55.6
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.1e-71 275.0 191 71.7
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.3e-64 250.8 360 48.9
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 7.1e-58 229.2 566 37.6
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 3.8e-35 153.7 148 54.7
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.4e-34 151.0 187 50.3
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.6e-33 148.3 325 37.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 3.1e-29 134.0 107 61.7
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.2e-25 122.1 329 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 5.0e-19 100.1 150 40.7
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 1.5e-07 62.0 264 24.6
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 2.6e-07 61.2 62 50.0
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.7e-06 58.5 43 74.4
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 4.8e-06 57.0 62 46.8
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 57.1
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 8.2e-06 56.2 56 48.2
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 8.2e-06 56.2 62 46.8


User provided reference genes

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