Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 3.2e-75 285.0 145 100.0
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 6.6e-49 197.6 105 95.2
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 7.6e-21 104.4 143 46.2
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 6.3e-15 84.7 95 48.4
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.1e-14 84.0 117 43.6
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 3.1e-14 82.4 99 44.4
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.5e-13 80.1 81 45.7
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 2.6e-13 79.3 80 53.8
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.6e-13 79.3 79 48.1
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.4e-13 79.0 73 50.7
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 3.4e-13 79.0 86 48.8
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 3.4e-13 79.0 86 44.2
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 7.7e-13 77.8 76 52.6
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 7.7e-13 77.8 70 48.6
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.0e-12 77.4 70 48.6
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.3e-12 77.0 76 51.3
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.3e-12 77.0 67 61.2
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.7e-12 76.6 102 44.1
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.7e-12 76.6 73 46.6
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.7e-12 76.6 93 44.1
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.2e-12 76.3 116 37.9
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 2.2e-12 76.3 80 52.5
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 3.8e-12 75.5 88 44.3
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 3.8e-12 75.5 82 46.3
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 5.0e-12 75.1 99 44.4
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 6.5e-12 74.7 99 44.4
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.1e-11 73.9 74 50.0
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.1e-11 73.9 93 44.1
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.4e-11 73.6 108 40.7
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 1.4e-11 73.6 72 52.8
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 1.9e-11 73.2 70 41.4
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.9e-11 73.2 70 41.4
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.9e-11 73.2 99 43.4
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.5e-11 72.8 89 43.8
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 2.5e-11 72.8 89 43.8
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 4.2e-11 72.0 118 37.3
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 5.5e-11 71.6 89 42.7
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 7.2e-11 71.2 73 46.6
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 9.4e-11 70.9 91 40.7
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.2e-10 70.5 79 45.6
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 1.6e-10 70.1 103 35.9
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 2.7e-10 69.3 120 40.8
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 3.6e-10 68.9 72 48.6
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 7.9e-10 67.8 86 39.5
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.9e-10 67.8 70 40.0
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 7.9e-10 67.8 68 45.6
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.0e-09 67.4 81 42.0
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 1.0e-09 67.4 70 41.4
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 1.4e-09 67.0 111 38.7
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 2.3e-09 66.2 122 39.3
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 5.1e-09 65.1 74 50.0
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 6.7e-09 64.7 97 43.3
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.1e-08 63.9 116 42.2
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.1e-08 63.9 68 42.6
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 2.0e-08 63.2 117 37.6
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.0e-08 63.2 113 38.9
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 2.0e-08 63.2 120 40.0
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.0e-08 63.2 70 38.6
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 2.5e-08 62.8 80 43.8
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 3.3e-08 62.4 45 60.0
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 3.3e-08 62.4 86 41.9
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 4.3e-08 62.0 116 37.9
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 4.3e-08 62.0 127 34.6
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 5.7e-08 61.6 121 38.8
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 9.7e-08 60.8 117 39.3
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.3e-07 60.5 117 38.5
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.3e-07 60.5 117 38.5
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.7e-07 60.1 116 37.1
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 1.7e-07 60.1 76 42.1
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 2.8e-07 59.3 67 35.8
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 4.8e-07 58.5 116 36.2
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 6.3e-07 58.2 121 33.1
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 6.3e-07 58.2 73 41.1
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 8.2e-07 57.8 112 38.4
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 8.2e-07 57.8 70 42.9
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 8.2e-07 57.8 127 33.9
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 1.1e-06 57.4 121 37.2
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 1.1e-06 57.4 96 38.5
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.4e-06 57.0 116 33.6
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 1.8e-06 56.6 92 35.9
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 4.1e-06 55.5 70 42.9
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 5.3e-06 55.1 129 31.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.9e-06 54.7 124 36.3
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 9.1e-06 54.3 65 46.2


User provided reference genes

Program Settings