Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 4.2e-209 731.1 362 100.0
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.3e-133 480.3 364 67.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.5e-121 440.3 359 61.0
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 3.3e-121 439.1 348 63.5
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.6e-120 436.8 356 61.0
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 6.8e-119 431.4 363 61.2
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 4.9e-117 425.2 381 56.4
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.2e-112 410.6 364 56.9
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.7e-112 408.7 367 59.1
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 6.2e-112 408.3 379 57.5
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.1e-111 407.5 348 58.6
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.4e-111 407.1 363 58.1
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 3.1e-111 406.0 363 55.6
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 6.8e-111 404.8 366 57.9
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.4e-109 398.3 359 58.5
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 8.3e-109 397.9 360 57.5
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 2.4e-108 396.4 356 57.9
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.1e-108 395.6 363 54.0
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 5.4e-108 395.2 356 59.0
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 5.4e-108 395.2 360 55.0
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 9.2e-108 394.4 363 54.0
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 1.6e-107 393.7 364 53.6
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 2.7e-107 392.9 366 57.1
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 7.8e-107 391.3 364 53.6
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.0e-106 391.0 366 56.0
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.0e-106 391.0 365 57.0
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.7e-106 390.2 371 53.4
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 3.9e-106 389.0 337 58.8
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 3.9e-106 389.0 365 53.7
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.1e-106 388.7 362 53.0
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 5.1e-106 388.7 369 53.7
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 8.6e-106 387.9 344 58.7
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.2e-104 384.0 369 53.7
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.2e-104 381.7 370 55.1
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.1e-103 380.9 361 52.6
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 5.2e-103 378.6 360 52.5
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 6.8e-103 378.3 365 54.8
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.2e-102 377.5 366 53.0
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 1.2e-102 377.5 359 54.9
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 5.8e-102 375.2 359 53.8
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 9.9e-102 374.4 369 54.7
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.3e-101 374.0 370 52.4
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.7e-101 373.6 359 54.3
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.2e-101 373.2 348 55.2
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 2.2e-101 373.2 342 54.7
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 2.9e-101 372.9 364 51.6
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 3.8e-101 372.5 364 53.3
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 1.9e-100 370.2 367 51.0
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 9.2e-100 367.9 357 54.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 6.0e-99 365.2 366 52.7
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 3.3e-97 359.4 337 56.1
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.2e-96 357.5 360 51.9
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.6e-96 357.1 366 51.1
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 2.1e-96 356.7 335 54.3
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.4e-95 353.2 368 50.0
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 4.4e-94 349.0 365 48.5
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 9.9e-94 347.8 315 58.4
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.2e-93 346.7 365 48.2
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 8.4e-93 344.7 372 50.8
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.1e-92 344.4 362 51.9
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 2.4e-92 343.2 366 51.1
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 2.4e-92 343.2 305 58.0
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 6.0e-91 338.6 370 52.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 5.1e-90 335.5 370 51.4
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 6.6e-90 335.1 362 50.8
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.6e-88 330.5 366 51.4
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 3.6e-88 329.3 370 50.0
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 8.1e-88 328.2 371 50.7
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 1.1e-87 327.8 389 48.6
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 4.0e-87 325.9 364 51.1
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 5.3e-87 325.5 333 52.6
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 9.0e-87 324.7 364 50.0
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 9.0e-87 324.7 322 53.1
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 2.6e-86 323.2 340 50.9
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 7.6e-86 321.6 355 51.5
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 2.9e-85 319.7 372 50.3
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.4e-84 317.4 306 53.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 5.4e-84 315.5 351 49.0
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 9.3e-84 314.7 348 51.4
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 7.9e-83 311.6 355 46.2
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 7.4e-81 305.1 260 57.7
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 3.7e-80 302.8 273 58.2
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 3.4e-78 296.2 257 57.2
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.2e-77 293.5 284 52.1
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.2e-77 293.5 285 54.0
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.5e-76 288.9 347 48.1
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.6e-75 287.3 276 56.5
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 2.7e-75 286.6 293 55.6
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 4.3e-73 279.3 304 52.0
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.1e-72 276.9 271 55.4
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 2.0e-70 270.4 276 54.0
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 5.8e-70 268.9 279 50.5
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 4.5e-62 242.7 234 54.3
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 3.9e-58 229.6 270 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 2.4e-55 220.3 361 39.3
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.2e-52 209.9 328 39.6
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 2.1e-51 207.2 172 61.0
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.4e-50 204.5 369 35.5
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.0e-50 203.4 196 58.7
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 5.7e-49 199.1 265 44.9
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.3e-48 198.0 328 38.7
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 3.1e-47 193.4 344 39.5
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 3.4e-46 189.9 230 47.4
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.4e-44 184.5 341 36.7
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 7.2e-44 182.2 223 47.5
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 5.5e-36 156.0 222 44.6
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 5.7e-33 146.0 213 41.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 1.6e-30 137.9 159 48.4
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 2.7e-30 137.1 93 67.7
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.3e-24 118.2 197 38.1
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.2e-22 111.7 81 58.0
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.3e-21 108.2 358 28.2
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.5e-20 104.0 231 39.0
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 5.5e-20 102.8 94 50.0
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 9.5e-20 102.1 125 44.0
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 4.7e-19 99.8 75 58.7
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.7e-16 90.1 289 30.1
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-15 87.0 72 66.7
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 7.8e-14 82.4 203 31.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 7.3e-12 75.9 330 26.4
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 2.8e-11 73.9 66 43.9
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.3e-10 70.9 47 66.0
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.4e-09 67.0 43 74.4
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.2e-08 64.3 178 31.5
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 4.9e-08 63.2 61 50.8


User provided reference genes

Program Settings