Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy170s003 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 3.2e-80 302.8 143 100.0
Aqoxy7G03216 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 3.2e-80 302.8 143 100.0
TAR629G2088 Trochodendron aralioides HOM05D005280 ORTHO05D006253 5.5e-72 275.4 143 87.4
Nn1g04427 Nelumbo nucifera HOM05D005280 ORTHO05D006253 4.6e-71 272.3 143 85.3
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 4.1e-67 259.2 141 84.4
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 5.3e-67 258.8 141 83.7
PSO229G0003 Papaver somniferum HOM05D005280 ORTHO05D006253 1.5e-66 257.3 142 85.2
PSO675G8759 Papaver somniferum HOM05D005280 ORTHO05D006253 1.0e-65 254.6 142 83.8
Hma1.2p1_1912F.1_g307320 Hydrangea macrophylla HOM05D005280 ORTHO05D006253 2.2e-65 253.4 141 80.9
MBI05_g10770_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 5.0e-65 252.3 143 79.7
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 8.5e-65 251.5 141 80.9
MBI07_g43934_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.4e-64 250.8 143 79.7
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 1.9e-64 250.4 141 78.7
HPP92_008751 Vanilla planifolia HOM05D005280 ORTHO05D006253 1.9e-64 250.4 142 77.5
MELO3C007211.2 Cucumis melo HOM05D005280 ORTHO05D006253 2.5e-64 250.0 141 80.9
vmacro16064 Vaccinium macrocarpon HOM05D005280 ORTHO05D006253 2.5e-64 250.0 141 78.0
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 4.2e-64 249.2 141 79.4
ClCG01G023770 Citrullus lanatus HOM05D005280 ORTHO05D006253 7.2e-64 248.4 141 80.1
CsaV3_6G050930 Cucumis sativus L. HOM05D005280 ORTHO05D006253 7.2e-64 248.4 141 80.1
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 9.3e-64 248.1 141 80.9
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 1.2e-63 247.7 143 80.4
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 2.1e-63 246.9 145 77.9
Sed0011601 Sechium edule HOM05D005280 ORTHO05D006253 2.7e-63 246.5 141 79.4
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 3.6e-63 246.1 141 78.0
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 3.6e-63 246.1 141 79.4
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 4.6e-63 245.7 143 77.6
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 7.9e-63 245.0 144 80.6
Psat1g197880 Pisum sativum HOM05D005280 ORTHO05D006253 1.0e-62 244.6 143 77.6
Rhsim02G0143200 Rhododendron simsii HOM05D005280 ORTHO05D006253 1.3e-62 244.2 141 78.0
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 1.8e-62 243.8 143 76.9
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 2.3e-62 243.4 141 75.9
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 3.0e-62 243.0 146 76.0
RcHm_v2.0_Chr5g0010881 Rosa chinensis HOM05D005280 ORTHO05D006253 3.0e-62 243.0 147 76.2
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 5.1e-62 242.3 143 78.3
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 6.7e-62 241.9 146 76.0
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 6.7e-62 241.9 143 77.6
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 8.7e-62 241.5 146 76.0
FAN11G1284 Fragaria x ananassa HOM05D005280 ORTHO05D006253 8.7e-62 241.5 146 76.0
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 8.7e-62 241.5 146 76.0
Atru.chr10.1658 Acer truncatum HOM05D005280 ORTHO05D006253 1.1e-61 241.1 142 77.5
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 1.1e-61 241.1 142 75.4
FAN21G3704 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.1e-61 241.1 146 75.3
FAN25G0161 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.1e-61 241.1 146 76.0
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 1.9e-61 240.4 142 78.2
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 1.9e-61 240.4 145 72.4
Glyma.15G083100 Glycine max HOM05D005280 ORTHO05D006253 2.5e-61 240.0 143 76.2
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 3.3e-61 239.6 143 75.5
FvH4_3g07730 Fragaria vesca HOM05D005280 ORTHO05D006253 4.3e-61 239.2 146 75.3
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 4.3e-61 239.2 143 75.5
VMungo0540G1202 Vigna mungo HOM05D005280 ORTHO05D006253 7.4e-61 238.4 143 76.9
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 1.3e-60 237.7 144 75.7
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 1.6e-60 237.3 143 76.2
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 1.6e-60 237.3 143 76.2
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 1.6e-60 237.3 144 75.0
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 2.8e-60 236.5 143 74.8
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 3.7e-60 236.1 151 72.2
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 3.7e-60 236.1 144 75.7
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 4.8e-60 235.7 151 71.5
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 6.3e-60 235.3 142 76.1
Cc02_g15040 Coffea canephora HOM05D005280 ORTHO05D006253 1.1e-59 234.6 146 74.0
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 2.4e-59 233.4 143 75.5
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 2.4e-59 233.4 153 70.6
Sabra04G0037300 Salix brachista HOM05D005280 ORTHO05D006253 3.1e-59 233.0 144 73.6
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 6.9e-59 231.9 140 72.9
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 9.1e-59 231.5 145 71.0
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 2.0e-58 230.3 143 74.8
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 2.0e-58 230.3 140 72.1
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 2.0e-58 230.3 140 72.1
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 2.6e-58 229.9 140 73.6
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 2.6e-58 229.9 140 72.1
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 3.4e-58 229.6 145 74.5
THA.LOC104812639 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 4.5e-58 229.2 141 71.6
MSTRG.7412 Avicennia marina HOM05D005280 ORTHO05D006253 1.0e-57 228.0 142 73.2
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 2.9e-57 226.5 142 72.5
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 6.5e-57 225.3 140 70.7
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 6.5e-57 225.3 140 70.0
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 8.5e-57 224.9 142 69.0
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 8.5e-57 224.9 140 70.0
unitig_699.g19366 Utricularia gibba HOM05D005280 ORTHO05D006253 8.5e-57 224.9 142 71.8
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 1.1e-56 224.6 142 70.4
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 1.4e-56 224.2 142 70.4
COL.COLO4_31288 Corchorus olitorius HOM05D005280 ORTHO05D006253 1.9e-56 223.8 142 69.0
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 1.9e-56 223.8 142 68.3
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 1.9e-56 223.8 142 70.4
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 2.5e-56 223.4 142 70.4
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 3.2e-56 223.0 142 70.4
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 4.2e-56 222.6 142 69.0
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 1.2e-55 221.1 142 67.6
Aqoxy1G02047 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 1.6e-55 220.7 104 100.0
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 1.6e-55 220.7 142 69.7
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 1.6e-55 220.7 142 69.7
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 1.6e-55 220.7 142 69.7
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 1.6e-55 220.7 142 68.3
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 2.1e-55 220.3 142 69.0
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 2.1e-55 220.3 142 69.0
Sp1g25120 Schrenkiella parvula HOM05D005280 ORTHO05D006253 3.6e-55 219.5 142 69.7
BcaC01g00082 Brassica carinata HOM05D005280 ORTHO05D006253 4.6e-55 219.2 142 69.0
C03p75590 Brassica napus HOM05D005280 ORTHO05D006253 4.6e-55 219.2 142 69.0
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 4.6e-55 219.2 142 69.0
BcaB07g32507 Brassica carinata HOM05D005280 ORTHO05D006253 7.9e-55 218.4 142 69.0
BraA08t34477Z Brassica rapa HOM05D005280 ORTHO05D006253 1.0e-54 218.0 142 68.3
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 1.0e-54 218.0 142 69.7
Thhalv10008237m.g Eutrema salsugineum HOM05D005280 ORTHO05D006253 1.0e-54 218.0 142 69.0
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 3.0e-54 216.5 142 69.7
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 3.0e-54 216.5 142 68.3
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 1.5e-53 214.2 142 68.3
BcaB03g12145 Brassica carinata HOM05D005280 ORTHO05D006253 2.0e-53 213.8 142 67.6
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 2.6e-53 213.4 143 67.1
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 3.3e-53 213.0 141 70.2
PSO782G3364 Papaver somniferum HOM05D005280 ORTHO05D006253 2.9e-49 199.9 115 80.9
Cre17.g730200 Chlamydomonas reinhardtii HOM05D005280 ORTHO05D006253 4.7e-47 192.6 139 60.4
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 1.1e-45 188.0 143 63.6
Zm00001eb238680 Zea mays HOM05D005280 ORTHO05D006253 2.6e-45 186.8 144 59.0
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 5.3e-43 179.1 140 61.4
A08p25250 Brassica napus HOM05D005280 ORTHO05D006253 5.5e-40 169.1 142 55.6
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 2.1e-39 167.2 109 72.5
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 3.3e-37 159.8 108 68.5
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 4.4e-37 159.5 131 56.5
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 1.8e-35 154.1 102 65.7
ATR0706G060 Amborella trichopoda HOM05D005280 ORTHO05D006253 7.0e-35 152.1 112 63.4
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 2.0e-34 150.6 141 53.2
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 8.5e-33 145.2 110 60.9
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 8.0e-23 112.1 145 44.1
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.7e-20 103.2 143 38.5
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 7.0e-19 99.0 143 38.5
VMungo1383G1864 Vigna mungo HOM05D005280 ORTHO05D006253 2.7e-10 70.5 37 81.1
Dinv41375 Davidia involucrata HOM05D000140 ORTHO05D000087 7.8e-10 68.9 132 37.9
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 5.0e-09 66.2 34 79.4
FAN14G0286 Fragaria x ananassa HOM05D005280 ORTHO05D019446 1.5e-08 64.7 111 36.0
VMungo0331G0944 Vigna mungo HOM05D005280 ORTHO05D006253 2.5e-08 63.9 36 75.0
Cfa022092 Carpinus fangiana HOM05D000164 ORTHO05D121826 4.7e-07 59.7 76 38.2
DCAR_013994 Daucus carota HOM05D000347 ORTHO05D001997 4.7e-07 59.7 139 27.3
C01p03540 Brassica napus HOM05D003405 ORTHO05D003920 8.0e-07 58.9 109 31.2
BolC1t00343H Brassica oleracea HOM05D003405 ORTHO05D003920 8.0e-07 58.9 109 31.2
BcaNung00602 Brassica carinata HOM05D003405 ORTHO05D003920 1.1e-06 58.5 106 33.0
ATR0829G129 Amborella trichopoda HOM05D050206 ORTHO05D038281 1.4e-06 58.2 135 30.4
BcaNung00601 Brassica carinata HOM05D003405 ORTHO05D003920 4.0e-06 56.6 81 37.0
A06p35150 Brassica napus HOM05D000645 ORTHO05D000494 6.8e-06 55.8 76 35.5
BraA06t26435Z Brassica rapa HOM05D000645 ORTHO05D000494 6.8e-06 55.8 76 35.5
Sed0013567 Sechium edule HOM05D000684 ORTHO05D000688 8.9e-06 55.5 138 27.5


User provided reference genes

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