Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 4.4e-194 681.0 323 100.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 3.2e-112 409.1 314 63.4
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.0e-110 404.1 261 69.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.1e-109 400.6 315 61.6
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 4.8e-108 395.2 305 63.9
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.7e-105 386.7 308 60.4
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.5e-104 382.9 314 59.6
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 7.2e-104 381.3 310 61.3
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 4.7e-103 378.6 267 66.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.0e-102 377.5 269 64.7
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.2e-101 374.0 313 61.3
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.5e-101 373.6 275 65.1
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.3e-100 370.5 262 66.0
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 2.8e-100 369.4 264 64.8
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 2.8e-100 369.4 264 65.9
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 6.3e-100 368.2 282 63.8
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.4e-99 367.1 255 64.3
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.4e-99 367.1 251 64.5
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.8e-99 366.7 272 60.3
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.8e-99 366.7 272 60.7
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 2.4e-99 366.3 265 66.0
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.1e-99 365.9 251 64.5
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 7.0e-99 364.8 278 63.7
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 3.5e-98 362.5 272 59.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 4.5e-98 362.1 260 63.1
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 7.7e-98 361.3 273 60.4
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.0e-97 360.9 253 63.2
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.0e-97 360.9 266 62.4
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-97 360.5 255 62.0
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 1.7e-97 360.1 270 62.6
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.7e-97 360.1 274 61.3
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 2.2e-97 359.8 317 57.1
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.2e-97 359.8 266 63.9
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.9e-97 359.4 279 60.6
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 8.5e-97 357.8 253 63.2
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.5e-96 357.1 317 54.9
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.5e-96 357.1 257 64.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-96 356.3 255 61.6
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 5.5e-96 355.1 301 58.5
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 2.1e-95 353.2 267 60.7
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 3.6e-95 352.4 269 61.7
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 4.7e-95 352.1 255 64.7
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 6.1e-95 351.7 263 63.9
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 8.0e-95 351.3 252 67.1
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 8.8e-94 347.8 253 62.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.2e-93 347.4 287 58.5
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 1.5e-93 347.1 268 61.2
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 7.5e-93 344.7 253 62.1
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.3e-92 344.0 253 62.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.3e-92 344.0 272 58.8
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 1.7e-92 343.6 282 56.7
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 3.7e-92 342.4 264 62.1
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 6.3e-92 341.7 251 61.4
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 1.4e-91 340.5 254 62.6
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.8e-91 340.1 255 62.0
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 7.0e-91 338.2 274 56.9
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.6e-90 337.0 239 63.2
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 4.5e-90 335.5 281 59.8
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 2.9e-89 332.8 234 66.7
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.9e-88 330.1 256 60.9
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 7.2e-88 328.2 253 60.9
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 7.2e-88 328.2 253 60.9
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.1e-87 326.6 338 50.3
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 4.7e-87 325.5 251 59.8
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 6.1e-87 325.1 249 60.6
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 2.3e-86 323.2 253 60.1
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 4.0e-86 322.4 273 57.9
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 5.2e-86 322.0 302 56.3
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.6e-85 319.7 234 61.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.7e-85 318.5 234 61.1
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.8e-84 316.2 234 60.3
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 2.3e-81 306.6 250 59.2
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 5.0e-81 305.4 267 55.8
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 5.6e-80 302.0 276 54.3
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 6.1e-79 298.5 267 55.1
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 1.2e-77 294.3 259 58.7
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 6.0e-74 282.0 278 51.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.3e-73 280.8 301 48.5
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-72 276.6 206 60.2
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 9.5e-72 274.6 306 48.7
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.8e-70 268.5 319 45.8
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 2.7e-66 256.5 204 57.4
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 6.8e-62 241.9 252 49.6
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 3.6e-55 219.5 253 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 8.1e-55 218.4 268 40.3
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.2e-50 204.5 182 53.3
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 4.3e-48 196.1 148 61.5
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 2.1e-47 193.7 135 63.7
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 2.1e-47 193.7 257 40.1
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.1e-43 181.4 248 38.7
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.4e-38 164.5 129 62.0
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.5e-37 159.5 107 60.7
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 4.2e-35 152.9 107 60.7
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-29 134.4 83 65.1
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.1e-27 128.3 281 30.6
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.9e-27 127.5 130 52.3
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 4.6e-26 122.9 80 68.8
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 1.2e-21 108.2 84 59.5
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.7e-20 104.4 69 65.2
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 6.7e-17 92.4 53 66.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 6.7e-17 92.4 53 66.0
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-14 84.7 72 59.7
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-14 84.7 72 59.7
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 4.5e-13 79.7 65 60.0
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.2e-10 71.6 59 54.2
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 1.6e-10 71.2 62 51.6
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.7e-10 70.5 103 40.8
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 4.6e-10 69.7 57 54.4
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 4.6e-10 69.7 57 54.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-08 65.1 51 58.8
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 4.1e-06 56.6 42 57.1
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 5.3e-06 56.2 31 74.2


User provided reference genes

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