Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03188 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 5.4e-69 264.2 136 100.0
Actinidia17952 Actinidia chinensis HOM05D000425 ORTHO05D000373 2.5e-13 79.3 45 80.0
Actinidia01826 Actinidia chinensis HOM05D000425 ORTHO05D000373 7.2e-13 77.8 97 45.4
GSVIVG01033628001 Vitis vinifera HOM05D000425 ORTHO05D000373 9.4e-13 77.4 45 77.8
Haze_20226 Corylus avellana HOM05D000425 ORTHO05D000373 1.6e-12 76.6 121 40.5
TAR625G0868 Trochodendron aralioides HOM05D000425 ORTHO05D000373 1.6e-12 76.6 88 52.3
Dinv09705 Davidia involucrata HOM05D000425 ORTHO05D000373 6.1e-12 74.7 45 75.6
Ca_26015_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 7.9e-12 74.3 45 77.8
Manes.08G060000 Manihot esculenta HOM05D000425 ORTHO05D000373 1.0e-11 73.9 45 71.1
Phvul.007G256500 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 1.8e-11 73.2 45 77.8
DCAR_020571 Daucus carota HOM05D000425 ORTHO05D000373 2.3e-11 72.8 45 73.3
TPR.G25098 Trifolium pratense HOM05D000425 ORTHO05D000373 2.3e-11 72.8 45 75.6
CAN.G30.27 Capsicum annuum HOM05D000425 ORTHO05D000373 3.0e-11 72.4 45 73.3
Rhsim03G0039800 Rhododendron simsii HOM05D000425 ORTHO05D000373 3.0e-11 72.4 45 73.3
THA.LOC104824400 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 3.0e-11 72.4 45 71.1
vmacro07798 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 3.9e-11 72.0 98 41.8
VMungo0720G1160 Vigna mungo HOM05D000425 ORTHO05D000373 3.9e-11 72.0 45 75.6
Lj1g0000007 Lotus japonicus HOM05D000425 ORTHO05D000373 5.1e-11 71.6 45 75.6
Medtr4g037690 Medicago truncatula HOM05D000425 ORTHO05D000373 5.1e-11 71.6 49 71.4
Aa31LG3G810 Aethionema arabicum HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 73.3
Glyma.02G179100 Glycine max HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 75.6
Lj2C398G8 Lonicera japonica HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 75.6
MBI14_g30708_MAGBIO Magnolia biondii HOM05D000425 ORTHO05D000373 6.7e-11 71.2 89 49.4
MD14G1088200 Malus domestica HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 73.3
Solyc03g078150.3 Solanum lycopersicum HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 73.3
Sopen03g020870 Solanum pennellii HOM05D000425 ORTHO05D000373 6.7e-11 71.2 45 73.3
PGSC0003DMG400031347 Solanum tuberosum HOM05D000425 ORTHO05D000373 8.8e-11 70.9 45 75.6
CiPaw.10G040100 Carya illinoinensis HOM05D000425 ORTHO05D000373 1.1e-10 70.5 45 71.1
Cc06_g19200 Coffea canephora HOM05D000425 ORTHO05D000373 1.1e-10 70.5 45 71.1
Glyma.10G094000 Glycine max HOM05D000425 ORTHO05D000373 1.5e-10 70.1 45 73.3
Medtr7g089905 Medicago truncatula HOM05D000425 ORTHO05D000373 1.5e-10 70.1 45 73.3
Phvul.002G156400 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 1.5e-10 70.1 45 68.9
BcaC01g05356 Brassica carinata HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
A03p23110 Brassica napus HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
C03p27510 Brassica napus HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
BolC3t15127H Brassica oleracea HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
BraA03t11532Z Brassica rapa HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
Peaxi162Scf00076g00615 Petunia axillaris HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
Sp4g23490 Schrenkiella parvula HOM05D000425 ORTHO05D000373 2.0e-10 69.7 45 68.9
FvH4_6g25440 Fragaria vesca HOM05D000425 ORTHO05D000373 2.6e-10 69.3 45 71.1
Lalb_Chr14g0365841 Lupinus albus HOM05D000425 ORTHO05D000373 2.6e-10 69.3 45 73.3
Hma1.2p1_0546F.1_g176300 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 3.3e-10 68.9 88 47.7
PSO063G4462 Papaver somniferum HOM05D000425 ORTHO05D000373 3.3e-10 68.9 93 50.5
PSO782G1257 Papaver somniferum HOM05D000425 ORTHO05D000373 3.3e-10 68.9 93 50.5
SalBow6G6291 Salvia bowleyana HOM05D000425 ORTHO05D000373 3.3e-10 68.9 45 71.1
Sc19g0008190 Simmondsia chinensis HOM05D000425 ORTHO05D000373 3.3e-10 68.9 49 69.4
TPR.G30716 Trifolium pratense HOM05D000425 ORTHO05D000373 3.3e-10 68.9 46 71.7
CARHR136280 Cardamine hirsuta HOM05D000425 ORTHO05D000373 4.4e-10 68.6 45 66.7
Glyma.01G218600 Glycine max HOM05D000425 ORTHO05D000373 4.4e-10 68.6 45 73.3
Prupe.7G038500 Prunus persica HOM05D000425 ORTHO05D000373 4.4e-10 68.6 45 68.9
Hund24588 Selenicereus undatus HOM05D000425 ORTHO05D000373 5.7e-10 68.2 47 63.8
EL10Ac3g07237 Beta vulgaris HOM05D000425 ORTHO05D000373 7.4e-10 67.8 89 41.6
BcaNung05631 Brassica carinata HOM05D000425 ORTHO05D000373 7.4e-10 67.8 45 66.7
CSS0026804 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 7.4e-10 67.8 44 72.7
AL4G39160 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
AT2G41190 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
arahy.Tifrunner.gnm1.ann1.9178ZA Arachis hypogaea HOM05D000425 ORTHO05D000373 9.7e-10 67.4 46 67.4
BcaC02g12844 Brassica carinata HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
A04p31390 Brassica napus HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
C04p68820 Brassica napus HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
BolC4t28385H Brassica oleracea HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
BraA04t18597Z Brassica rapa HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
Thhalv10016504m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 9.7e-10 67.4 45 66.7
BcaC02g12759 Brassica carinata HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 66.7
A05p02100 Brassica napus HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 66.7
C04p02510 Brassica napus HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 66.7
BolC4t21894H Brassica oleracea HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 66.7
BraA05t19206Z Brassica rapa HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 66.7
AUR62018347 Chenopodium quinoa HOM05D000425 ORTHO05D000373 1.3e-09 67.0 89 42.7
RcHm_v2.0_Chr2g0125591 Rosa chinensis HOM05D000425 ORTHO05D000373 1.3e-09 67.0 45 68.9
Ciclev10004676m.g Citrus clementina HOM05D000425 ORTHO05D000373 1.7e-09 66.6 44 70.5
Psat3g078720 Pisum sativum HOM05D000425 ORTHO05D000373 2.2e-09 66.2 45 68.9
Cpa.g.sc5.170 Carica papaya HOM05D000425 ORTHO05D000373 2.8e-09 65.9 45 66.7
SHI24515 Sapria himalayana HOM05D000425 ORTHO05D000373 2.8e-09 65.9 47 61.7
BcaB01g03486 Brassica carinata HOM05D000425 ORTHO05D000373 3.7e-09 65.5 89 43.8
TWI53G1684 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 3.7e-09 65.5 45 64.4
Carub.0004s2350 Capsella rubella HOM05D000425 ORTHO05D000373 4.8e-09 65.1 45 64.4
MELO3C009758.2 Cucumis melo HOM05D000425 ORTHO05D000373 6.3e-09 64.7 45 71.1
ATR0580G131 Amborella trichopoda HOM05D000425 ORTHO05D000373 8.2e-09 64.3 44 70.5
DCAR_020570 Daucus carota HOM05D000425 ORTHO05D000373 8.2e-09 64.3 88 44.3
Duzib128G1058 Durio zibethinus HOM05D000425 ORTHO05D000373 1.1e-08 63.9 45 68.9
ECA247G0217 Erigeron canadensis HOM05D000425 ORTHO05D000373 1.1e-08 63.9 45 64.4
CANSAT64G0028 Cannabis sativa HOM05D000425 ORTHO05D000373 1.4e-08 63.5 45 66.7
BcaNung05630 Brassica carinata HOM05D002003 ORTHO05D000373 1.8e-08 63.2 43 65.1
CsaV3_3G040200 Cucumis sativus L. HOM05D000425 ORTHO05D000373 1.8e-08 63.2 87 46.0
Glyma.19G130500 Glycine max HOM05D000425 ORTHO05D000373 1.8e-08 63.2 45 68.9
SalBow1G8258 Salvia bowleyana HOM05D000425 ORTHO05D000373 1.8e-08 63.2 45 62.2
EL10Ac7g18229 Beta vulgaris HOM05D000425 ORTHO05D000373 2.4e-08 62.8 44 65.9
Cc00_g21360 Coffea canephora HOM05D000425 ORTHO05D000373 2.4e-08 62.8 45 62.2
HanXRQChr10g0289381 Helianthus annuus HOM05D000425 ORTHO05D000373 2.4e-08 62.8 45 60.0
CsaV3_3G040180 Cucumis sativus L. HOM05D000425 ORTHO05D000373 3.1e-08 62.4 45 64.4
Sed0015143 Sechium edule HOM05D000425 ORTHO05D000373 4.1e-08 62.0 45 62.2
MELO3C009757.2 Cucumis melo HOM05D000425 ORTHO05D000373 7.0e-08 61.2 45 60.0
HPP92_015351 Vanilla planifolia HOM05D000425 ORTHO05D000373 7.0e-08 61.2 45 62.2
SGA_v2.0_scaffold94G28541 Striga asiatica HOM05D000425 ORTHO05D000373 9.1e-08 60.8 45 64.4
Ah.08g217570 Amaranthus hybridus HOM05D000425 ORTHO05D000373 1.2e-07 60.5 44 65.9
Lsat_1_v5_gn_9_29820 Lactuca sativa HOM05D000425 ORTHO05D000373 1.5e-07 60.1 45 57.8
PGR031G3291 Punica granatum HOM05D000425 ORTHO05D000373 1.5e-07 60.1 45 62.2
arahy.Tifrunner.gnm1.ann1.IR4SGA Arachis hypogaea HOM05D000425 ORTHO05D000373 2.0e-07 59.7 45 62.2
MSTRG.26157 Avicennia marina HOM05D000425 ORTHO05D000373 2.0e-07 59.7 45 62.2
Gorai.003G086300 Gossypium raimondii HOM05D000425 ORTHO05D000373 2.6e-07 59.3 43 67.4
Gohir.D03G074600 Gossypium hirsutum HOM05D000425 ORTHO05D000373 3.4e-07 58.9 43 67.4
ECA247G0054 Erigeron canadensis HOM05D000425 ORTHO05D000373 4.5e-07 58.5 45 60.0
Peaxi162Scf00076g00617 Petunia axillaris HOM05D000425 ORTHO05D000373 4.5e-07 58.5 40 70.0
Lsat_1_v5_gn_9_29301 Lactuca sativa HOM05D000425 ORTHO05D000373 5.9e-07 58.2 45 57.8
arahy.Tifrunner.gnm1.ann1.KU2JHS Arachis hypogaea HOM05D000521 ORTHO05D000384 1.0e-06 57.4 45 57.8
Zm00001eb257440 Zea mays HOM05D000425 ORTHO05D000373 1.0e-06 57.4 45 64.4
HanXRQChr10g0292581 Helianthus annuus HOM05D000425 ORTHO05D000373 1.3e-06 57.0 38 65.8
Glyma.14G125801 Glycine max HOM05D000425 ORTHO05D000373 2.2e-06 56.2 44 63.6
Medtr7g089910 Medicago truncatula HOM05D000425 ORTHO05D000373 2.2e-06 56.2 36 75.0
Zm00001eb192710 Zea mays HOM05D000425 ORTHO05D000373 2.2e-06 56.2 45 62.2
unitig_899.g15479 Utricularia gibba HOM05D000425 ORTHO05D000373 2.9e-06 55.8 85 36.5
Gohir.A02G112714 Gossypium hirsutum HOM05D000425 ORTHO05D000373 6.5e-06 54.7 87 42.5


User provided reference genes

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