Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 4.2e-62 241.1 116 100.0
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 1.2e-19 100.1 91 50.5
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 1.9e-14 82.8 95 50.5
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 4.2e-14 81.6 109 45.0
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 4.2e-14 81.6 101 43.6
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.8e-12 76.3 96 37.5
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 3.0e-12 75.5 100 42.0
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 4.0e-12 75.1 95 38.9
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 5.2e-12 74.7 101 44.6
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 5.2e-12 74.7 97 36.1
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 5.2e-12 74.7 97 36.1
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 1.2e-11 73.6 112 32.1
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 2.0e-11 72.8 85 43.5
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 2.6e-11 72.4 97 39.2
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.4e-11 72.0 93 38.7
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 3.4e-11 72.0 99 37.4
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 4.4e-11 71.6 103 35.9
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 4.4e-11 71.6 92 41.3
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 9.8e-11 70.5 103 37.9
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 9.8e-11 70.5 106 38.7
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 9.8e-11 70.5 91 42.9
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 9.8e-11 70.5 99 38.4
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 1.7e-10 69.7 103 37.9
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.7e-10 69.7 91 42.9
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 1.7e-10 69.7 96 38.5
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 1.7e-10 69.7 78 39.7
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 2.2e-10 69.3 103 36.9
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 2.2e-10 69.3 103 36.9
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 2.2e-10 69.3 67 46.3
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 2.8e-10 68.9 104 35.6
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 2.8e-10 68.9 104 35.6
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 4.8e-10 68.2 101 35.6
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 4.8e-10 68.2 95 33.7
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 4.8e-10 68.2 102 35.3
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 6.3e-10 67.8 102 36.3
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 6.3e-10 67.8 102 34.3
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 6.3e-10 67.8 97 36.1
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 6.3e-10 67.8 97 36.1
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 8.3e-10 67.4 46 58.7
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 8.3e-10 67.4 104 33.7
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 1.1e-09 67.0 95 38.9
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 2.4e-09 65.9 95 38.9
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 2.4e-09 65.9 87 40.2
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 3.1e-09 65.5 102 33.3
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 3.1e-09 65.5 78 44.9
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 4.1e-09 65.1 102 35.3
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.4e-09 64.7 99 35.4
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 5.4e-09 64.7 95 34.7
MBI14_g17362_MAGBIO Magnolia biondii HOM05D008232 ORTHO05D010390 5.4e-09 64.7 82 41.5
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 7.0e-09 64.3 89 37.1
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 7.0e-09 64.3 85 40.0
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 7.0e-09 64.3 85 41.2
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 7.0e-09 64.3 49 55.1
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 9.1e-09 63.9 102 33.3
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 1.2e-08 63.5 59 47.5
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 1.2e-08 63.5 83 43.4
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 1.6e-08 63.2 95 36.8
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 1.6e-08 63.2 53 52.8
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 2.0e-08 62.8 48 54.2
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 3.5e-08 62.0 83 34.9
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 3.5e-08 62.0 58 51.7
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.5e-08 62.0 41 58.5
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 3.5e-08 62.0 72 43.1
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 4.5e-08 61.6 56 48.2
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 4.5e-08 61.6 49 49.0
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 5.9e-08 61.2 52 46.2
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 5.9e-08 61.2 48 52.1
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 7.7e-08 60.8 34 67.6
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 7.7e-08 60.8 45 55.6
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 7.7e-08 60.8 79 44.3
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.0e-07 60.5 93 37.6
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 1.3e-07 60.1 92 40.2
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 1.7e-07 59.7 81 35.8
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 2.3e-07 59.3 41 56.1
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 2.3e-07 59.3 34 67.6
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 2.9e-07 58.9 88 36.4
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 2.9e-07 58.9 49 46.9
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 2.9e-07 58.9 75 41.3
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 5.0e-07 58.2 47 46.8
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 5.0e-07 58.2 34 61.8
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 5.0e-07 58.2 72 43.1
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 6.6e-07 57.8 61 47.5
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 6.6e-07 57.8 86 31.4
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.6e-07 57.8 51 49.0
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 6.6e-07 57.8 48 50.0
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 6.6e-07 57.8 34 67.6
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 8.6e-07 57.4 81 38.3
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 8.6e-07 57.4 65 41.5
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 8.6e-07 57.4 82 39.0
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 8.6e-07 57.4 86 39.5
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 8.6e-07 57.4 58 51.7
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 1.1e-06 57.0 59 44.1
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 1.1e-06 57.0 58 48.3
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 1.5e-06 56.6 34 58.8
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 1.5e-06 56.6 55 47.3
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 2.5e-06 55.8 55 45.5
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 2.5e-06 55.8 62 46.8
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 2.5e-06 55.8 55 43.6
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 2.5e-06 55.8 63 39.7
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 2.5e-06 55.8 88 38.6
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 3.3e-06 55.5 107 36.4
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 3.3e-06 55.5 64 40.6
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.3e-06 55.5 34 64.7
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 4.2e-06 55.1 34 58.8
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 5.5e-06 54.7 42 52.4
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 5.5e-06 54.7 58 41.4
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 7.2e-06 54.3 55 45.5
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 7.2e-06 54.3 101 35.6
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 9.5e-06 53.9 34 58.8
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 9.5e-06 53.9 52 44.2
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 9.5e-06 53.9 55 41.8
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 9.5e-06 53.9 39 53.8
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 9.5e-06 53.9 36 55.6
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 9.5e-06 53.9 97 30.9
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 9.5e-06 53.9 87 34.5
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 9.5e-06 53.9 45 55.6
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 9.5e-06 53.9 67 38.8
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 9.5e-06 53.9 58 39.7


User provided reference genes

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