Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03045 Aquilegia oxysepala HOM05D003855 ORTHO05D004722 1.5e-192 676.0 340 100.0
Glyma.01G244900 Glycine max HOM05D003855 ORTHO05D004722 5.7e-59 232.3 332 38.0
Cc02_g18640 Coffea canephora HOM05D003855 ORTHO05D004722 2.2e-58 230.3 332 38.9
Cfa005469 Carpinus fangiana HOM05D003855 ORTHO05D004722 2.8e-58 229.9 332 39.2
VMungo1215G1975 Vigna mungo HOM05D003855 ORTHO05D004722 6.3e-58 228.8 332 38.0
Phvul.002G054400 Phaseolus vulgaris HOM05D003855 ORTHO05D004722 8.2e-58 228.4 332 37.3
MELO3C018441.2 Cucumis melo HOM05D003855 ORTHO05D004722 3.1e-57 226.5 332 37.7
SalBow6G4323 Salvia bowleyana HOM05D003855 ORTHO05D004722 4.1e-57 226.1 332 37.3
Medtr5g004680 Medicago truncatula HOM05D003855 ORTHO05D004722 9.1e-57 224.9 332 38.6
DCAR_001622 Daucus carota HOM05D003855 ORTHO05D004722 1.2e-56 224.6 332 38.3
Lj1g0003010 Lotus japonicus HOM05D003855 ORTHO05D004722 1.5e-56 224.2 332 36.4
arahy.Tifrunner.gnm1.ann1.7G1ZKD Arachis hypogaea HOM05D003855 ORTHO05D004722 2.0e-56 223.8 332 37.0
TPR.G21611 Trifolium pratense HOM05D003855 ORTHO05D004722 2.0e-56 223.8 332 38.0
Lalb_Chr16g0376231 Lupinus albus HOM05D003855 ORTHO05D004722 2.6e-56 223.4 332 38.0
Lj5A208T47 Lonicera japonica HOM05D003855 ORTHO05D004722 3.5e-56 223.0 332 38.0
arahy.Tifrunner.gnm1.ann1.920WM2 Arachis hypogaea HOM05D003855 ORTHO05D004722 4.5e-56 222.6 332 36.7
CsaV3_7G008690 Cucumis sativus L. HOM05D003855 ORTHO05D004722 4.5e-56 222.6 332 37.3
Oeu007277.1 Olea europaea HOM05D003855 ORTHO05D004722 1.0e-55 221.5 332 36.7
PGR042G3302 Punica granatum HOM05D003855 ORTHO05D004722 2.2e-55 220.3 332 36.7
Dinv23608 Davidia involucrata HOM05D003855 ORTHO05D004722 2.9e-55 219.9 332 38.0
Ciclev10027722m.g Citrus clementina HOM05D003855 ORTHO05D004722 3.8e-55 219.5 332 37.0
Psat4g213560 Pisum sativum HOM05D003855 ORTHO05D004722 5.0e-55 219.2 332 37.3
Dinv42141 Davidia involucrata HOM05D003855 ORTHO05D004722 6.5e-55 218.8 332 37.0
Ca_24336_v3 Cicer arietinum L. HOM05D003855 ORTHO05D004722 8.5e-55 218.4 332 37.0
GSVIVG01031766001 Vitis vinifera HOM05D003855 ORTHO05D004722 8.5e-55 218.4 332 37.0
MSTRG.16753 Avicennia marina HOM05D003855 ORTHO05D004722 1.1e-54 218.0 332 37.0
COL.COLO4_32675 Corchorus olitorius HOM05D003855 ORTHO05D004722 1.1e-54 218.0 329 36.2
TAR381G1366 Trochodendron aralioides HOM05D003855 ORTHO05D004722 1.1e-54 218.0 332 35.2
DCAR_029027 Daucus carota HOM05D003855 ORTHO05D004722 1.5e-54 217.6 332 37.7
Aqoxy6G01362 Aquilegia oxysepala HOM05D003855 ORTHO05D004722 1.9e-54 217.2 332 36.7
Sed0020763 Sechium edule HOM05D003855 ORTHO05D004722 1.9e-54 217.2 332 36.7
CSS0001000 Camellia sinensis var. sinensis HOM05D003855 ORTHO05D004722 2.5e-54 216.9 332 36.4
QL11p036227 Quercus lobata HOM05D003855 ORTHO05D004722 2.5e-54 216.9 331 37.8
DCAR_001621 Daucus carota HOM05D003855 ORTHO05D004722 4.2e-54 216.1 332 37.0
Cpa.g.sc62.29 Carica papaya HOM05D003855 ORTHO05D004722 5.5e-54 215.7 332 36.4
Prupe.8G122100 Prunus persica HOM05D003855 ORTHO05D004722 5.5e-54 215.7 332 35.5
Lsat_1_v5_gn_2_29981 Lactuca sativa HOM05D003855 ORTHO05D004722 7.2e-54 215.3 332 37.3
Potri.004G142300 Populus trichocarpa HOM05D003855 ORTHO05D004722 7.2e-54 215.3 332 36.1
vmacro02191 Vaccinium macrocarpon HOM05D003855 ORTHO05D004722 7.2e-54 215.3 318 37.4
Migut.B00330 Erythranthe guttata HOM05D003855 ORTHO05D004722 9.4e-54 214.9 332 36.1
Gohir.A04G120800 Gossypium hirsutum HOM05D003855 ORTHO05D004722 9.4e-54 214.9 332 35.8
TWI79G1596 Tripterygium wilfordii HOM05D003855 ORTHO05D004722 9.4e-54 214.9 332 35.8
Eucgr.G01465 Eucalyptus grandis HOM05D003855 ORTHO05D004722 1.2e-53 214.5 333 36.0
Thecc.02G098600 Theobroma cacao HOM05D003855 ORTHO05D004722 1.6e-53 214.2 332 35.5
Duzib052G0714 Durio zibethinus HOM05D003855 ORTHO05D004722 2.7e-53 213.4 332 35.8
Nn5g30224 Nelumbo nucifera HOM05D003855 ORTHO05D004722 2.7e-53 213.4 332 35.8
PSO541G0814 Papaver somniferum HOM05D003855 ORTHO05D004722 3.6e-53 213.0 332 36.1
ECA234G3461 Erigeron canadensis HOM05D003855 ORTHO05D004722 4.7e-53 212.6 332 35.2
Gorai.012G150300 Gossypium raimondii HOM05D003855 ORTHO05D004722 4.7e-53 212.6 332 35.8
HanXRQChr10g0301751 Helianthus annuus HOM05D003855 ORTHO05D004722 6.1e-53 212.2 332 35.5
Manes.10G066200 Manihot esculenta HOM05D003855 ORTHO05D004722 6.1e-53 212.2 332 35.8
Sabra09G0079400 Salix brachista HOM05D003855 ORTHO05D004722 6.1e-53 212.2 332 35.2
PGSC0003DMG400025820 Solanum tuberosum HOM05D003855 ORTHO05D004722 8.0e-53 211.8 332 35.8
HPP92_005974 Vanilla planifolia HOM05D003855 ORTHO05D004722 8.0e-53 211.8 320 37.2
Gohir.D04G162300 Gossypium hirsutum HOM05D003855 ORTHO05D004722 1.0e-52 211.5 332 35.8
Potri.009G103700 Populus trichocarpa HOM05D003855 ORTHO05D004722 1.0e-52 211.5 332 35.8
SGA_v2.0_scaffold32G13071 Striga asiatica HOM05D003855 ORTHO05D004722 1.0e-52 211.5 332 35.5
PSO675G1899 Papaver somniferum HOM05D003855 ORTHO05D004722 1.4e-52 211.1 332 36.1
BcaB07g33638 Brassica carinata HOM05D003855 ORTHO05D004722 1.8e-52 210.7 332 34.9
CDE10G0143 Ceratophyllum demersum HOM05D003855 ORTHO05D004722 1.8e-52 210.7 332 36.7
A03p41100 Brassica napus HOM05D003855 ORTHO05D004722 2.3e-52 210.3 332 35.5
Sabra04G0094100 Salix brachista HOM05D003855 ORTHO05D004722 2.3e-52 210.3 332 35.5
BcaC01g03642 Brassica carinata HOM05D003855 ORTHO05D004722 3.0e-52 209.9 332 35.8
BcaC08g43166 Brassica carinata HOM05D003855 ORTHO05D004722 3.0e-52 209.9 335 34.6
BolC6t35586H Brassica oleracea HOM05D003855 ORTHO05D004722 3.0e-52 209.9 335 34.6
BraA03t13267Z Brassica rapa HOM05D003855 ORTHO05D004722 3.0e-52 209.9 332 35.5
Aa31LG10G4390 Aethionema arabicum HOM05D003855 ORTHO05D004722 4.0e-52 209.5 329 35.3
C03p50190 Brassica napus HOM05D003855 ORTHO05D004722 4.0e-52 209.5 332 35.8
BolC3t17311H Brassica oleracea HOM05D003855 ORTHO05D004722 4.0e-52 209.5 332 35.8
CiPaw.05G052400 Carya illinoinensis HOM05D003855 ORTHO05D004722 4.0e-52 209.5 335 36.4
C06p04590 Brassica napus HOM05D003855 ORTHO05D004722 5.2e-52 209.1 335 34.6
BraA06t23565Z Brassica rapa HOM05D003855 ORTHO05D004722 5.2e-52 209.1 335 34.6
Sopen01g050820 Solanum pennellii HOM05D003855 ORTHO05D004722 5.2e-52 209.1 332 35.5
A06p03570 Brassica napus HOM05D003855 ORTHO05D004722 6.7e-52 208.8 335 34.3
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 6.7e-52 208.8 328 36.9
Sc08g0000010 Simmondsia chinensis HOM05D003855 ORTHO05D004722 6.7e-52 208.8 339 35.1
Zm00001eb255690 Zea mays HOM05D003855 ORTHO05D004722 1.1e-51 208.0 332 35.5
Lsat_1_v5_gn_5_112961 Lactuca sativa HOM05D003855 ORTHO05D004722 1.5e-51 207.6 326 35.9
Nitab4.5_0002097g0080 Nicotiana tabacum HOM05D003855 ORTHO05D004722 2.0e-51 207.2 332 35.8
Peaxi162Scf00016g01731 Petunia axillaris HOM05D003855 ORTHO05D004722 2.0e-51 207.2 332 36.4
Solyc01g108600.3 Solanum lycopersicum HOM05D003855 ORTHO05D004722 2.0e-51 207.2 332 35.2
A01p35360 Brassica napus HOM05D003855 ORTHO05D004722 2.6e-51 206.8 332 34.6
Aa31LG8G5960 Aethionema arabicum HOM05D003855 ORTHO05D004722 3.3e-51 206.5 332 34.6
BcaB04g19030 Brassica carinata HOM05D003855 ORTHO05D004722 3.3e-51 206.5 332 35.2
BraA01t03617Z Brassica rapa HOM05D003855 ORTHO05D004722 4.4e-51 206.1 332 34.6
MBI06_g04502_MAGBIO Magnolia biondii HOM05D003855 ORTHO05D004722 5.7e-51 205.7 332 34.9
RcHm_v2.0_Chr6g0258261 Rosa chinensis HOM05D003855 ORTHO05D004722 5.7e-51 205.7 332 34.3
BolC1t04455H Brassica oleracea HOM05D003855 ORTHO05D004722 7.5e-51 205.3 332 34.6
Nitab4.5_0001899g0100 Nicotiana tabacum HOM05D003855 ORTHO05D004722 7.5e-51 205.3 332 35.5
C01p44870 Brassica napus HOM05D003855 ORTHO05D004722 1.7e-50 204.1 332 34.6
Thhalv10019955m.g Eutrema salsugineum HOM05D003855 ORTHO05D004722 2.2e-50 203.8 332 34.9
FAN20G0084 Fragaria x ananassa HOM05D003855 ORTHO05D004722 2.8e-50 203.4 332 33.7
THA.LOC104818544 Tarenaya hassleriana HOM05D003855 ORTHO05D004722 2.8e-50 203.4 332 35.5
Sp3g17240 Schrenkiella parvula HOM05D003855 ORTHO05D004722 3.7e-50 203.0 332 34.6
ATR0100G044 Amborella trichopoda HOM05D003855 ORTHO05D004722 4.8e-50 202.6 332 34.3
Carub.0001s3883 Capsella rubella HOM05D003855 ORTHO05D004722 4.8e-50 202.6 329 34.0
AL3G32540 Arabidopsis lyrata HOM05D003855 ORTHO05D004722 6.3e-50 202.2 332 34.0
Hund00328 Selenicereus undatus HOM05D003855 ORTHO05D004722 6.3e-50 202.2 332 35.5
AT3G19170 Arabidopsis thaliana HOM05D003855 ORTHO05D004722 8.2e-50 201.8 332 34.0
Thhalv10011199m.g Eutrema salsugineum HOM05D003855 ORTHO05D004722 8.2e-50 201.8 336 34.5
FAN27G3432 Fragaria x ananassa HOM05D003855 ORTHO05D004722 8.2e-50 201.8 332 33.4
Carub.0003s1899 Capsella rubella HOM05D003855 ORTHO05D004722 1.1e-49 201.4 332 34.0
FvH4_2g06380 Fragaria vesca HOM05D003855 ORTHO05D004722 1.8e-49 200.7 332 33.1
Sp1g36500 Schrenkiella parvula HOM05D003855 ORTHO05D004722 1.8e-49 200.7 335 34.0
AT1G49630 Arabidopsis thaliana HOM05D003855 ORTHO05D004722 3.1e-49 199.9 329 34.0
CAN.G1041.7 Capsicum annuum HOM05D003855 ORTHO05D004722 4.1e-49 199.5 340 35.3
AL1G57020 Arabidopsis lyrata HOM05D003855 ORTHO05D004722 5.3e-49 199.1 332 33.7
CARHR039670 Cardamine hirsuta HOM05D003855 ORTHO05D004722 9.1e-49 198.4 331 33.5
EL10Ac9g21832 Beta vulgaris HOM05D003855 ORTHO05D004722 7.7e-48 195.3 326 35.3
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 2.2e-47 193.7 341 33.4
Pp3c5_3160 Physcomitrium patens HOM05D003855 ORTHO05D004722 5.0e-47 192.6 332 31.9
CARHR094570 Cardamine hirsuta HOM05D003855 ORTHO05D004722 1.5e-46 191.0 332 33.4
FAN15G0137 Fragaria x ananassa HOM05D003855 ORTHO05D004722 3.2e-46 189.9 363 30.9
Prupe.8G122200 Prunus persica HOM05D003855 ORTHO05D004722 3.2e-46 189.9 330 33.6
Haze_01847 Corylus avellana HOM05D003855 ORTHO05D004722 4.2e-46 189.5 280 38.6
SEGI_28882 Sequoiadendron giganteum HOM05D003855 ORTHO05D004722 4.2e-46 189.5 324 34.0
Haze_01842 Corylus avellana HOM05D003855 ORTHO05D004722 7.2e-46 188.7 280 38.6
SMO169G0211 Selaginella moellendorffii HOM05D003855 ORTHO05D004722 1.2e-45 188.0 333 31.2
Ah.01g020190 Amaranthus hybridus HOM05D003855 ORTHO05D004722 4.7e-45 186.0 332 33.4
Mapoly0138s0034 Marchantia polymorpha HOM05D003855 ORTHO05D004722 1.0e-44 184.9 332 30.1
CBR_g17894 Chara braunii HOM05D003855 ORTHO05D004722 1.4e-44 184.5 332 32.5
Rhsim11G0167000 Rhododendron simsii HOM05D003855 ORTHO05D004722 1.4e-44 184.5 331 33.5
THA.LOC104801598 Tarenaya hassleriana HOM05D003855 ORTHO05D004722 2.3e-44 183.7 332 31.9
Actinidia00451 Actinidia chinensis HOM05D003855 ORTHO05D004722 1.2e-43 181.4 331 33.2
Mapoly0138s0037 Marchantia polymorpha HOM05D003855 ORTHO05D004722 2.8e-42 176.8 306 32.7
AUR62011441 Chenopodium quinoa HOM05D003855 ORTHO05D004722 4.8e-42 176.0 332 31.9
AUR62016621 Chenopodium quinoa HOM05D003855 ORTHO05D004722 3.1e-41 173.3 332 31.3
Mapoly0813s0001 Marchantia polymorpha HOM05D003855 ORTHO05D004722 7.0e-41 172.2 306 32.4
MD05G1078000 Malus domestica HOM05D003855 ORTHO05D004722 2.7e-40 170.2 310 35.2
SHI05877 Sapria himalayana HOM05D003855 ORTHO05D004722 5.0e-39 166.0 297 33.3
SGA_v2.0_scaffold90G27671 Striga asiatica HOM05D003855 ORTHO05D004722 3.2e-38 163.3 240 37.9
Atru.chr5.2744 Acer truncatum HOM05D003855 ORTHO05D004722 2.0e-35 154.1 201 40.3
MD10G1092200 Malus domestica HOM05D003855 ORTHO05D004722 1.7e-34 151.0 282 34.0
MCO05G354 Micromonas commoda HOM05D003855 ORTHO05D004722 2.7e-32 143.7 337 28.2
CBR_g29853 Chara braunii HOM05D003855 ORTHO05D004722 2.3e-31 140.6 298 27.9
ClCG02G005810 Citrullus lanatus HOM05D003855 ORTHO05D004722 2.9e-31 140.2 194 39.7
Cre01.g020918 Chlamydomonas reinhardtii HOM05D003855 ORTHO05D004722 7.2e-30 135.6 324 26.9
PRCOL_00004407 Prasinoderma coloniale HOM05D003855 ORTHO05D004722 3.6e-29 133.3 336 25.9
MD05G1077700 Malus domestica HOM05D003855 ORTHO05D004722 1.4e-17 94.7 210 31.0
Actinidia12962 Actinidia chinensis HOM05D003855 ORTHO05D004722 3.2e-17 93.6 208 28.4
MD05G1078600 Malus domestica HOM05D003855 ORTHO05D004722 1.0e-15 88.6 187 31.6
Os02g0761400 Oryza sativa ssp. japonica HOM05D003855 ORTHO05D004722 5.6e-14 82.8 125 35.2
unitig_21.g20751 Utricularia gibba HOM05D003855 ORTHO05D004722 6.2e-13 79.3 112 35.7
Sc23g0007040 Simmondsia chinensis HOM05D003855 ORTHO05D004722 8.6e-07 58.9 148 29.1
SHI06221 Sapria himalayana HOM05D003855 ORTHO05D000001 7.3e-06 55.8 106 31.1


User provided reference genes

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