Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02998 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.8e-79 297.4 137 100.0
Aqoxy5G02544 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.0e-20 100.9 106 44.3
Aqoxy2G01350 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-19 98.2 106 42.5
Aqoxy1G03455 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-15 86.7 91 42.9
Aqoxy5G03054 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-14 83.6 92 39.1
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-11 73.6 93 37.6
Aqoxy7G01885 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-11 73.2 95 38.9
QL02p055170 Quercus lobata HOM05D000003 ORTHO05D000004 6.8e-11 71.2 81 38.3
QL09p000395 Quercus lobata HOM05D000003 ORTHO05D000004 6.8e-11 71.2 95 34.7
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 8.8e-11 70.9 88 37.5
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.5e-10 70.1 85 35.3
Aqoxy4G01646 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.4e-10 68.9 101 35.6
Aqoxy7G02241 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-10 68.6 101 34.7
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-10 68.2 100 33.0
Aqoxy3G02146 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.5e-10 67.8 101 34.7
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.5e-10 67.8 90 36.7
Aqoxy90s002 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-09 67.0 101 34.7
QL05p025219 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 66.6 100 35.0
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-09 66.6 105 33.3
Aqoxy4G01668 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-09 65.9 98 34.7
QL12p036057 Quercus lobata HOM05D001694 ORTHO05D000248 4.8e-09 65.1 100 37.0
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.9 88 33.0
QL06p025841 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-08 63.9 93 35.5
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-08 63.5 110 29.1
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-08 63.5 98 33.7
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 1.4e-08 63.5 111 32.4
CiPaw.03G161400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.8e-08 63.2 90 34.4
FvH4_4g09591 Fragaria vesca HOM05D000003 ORTHO05D000004 1.8e-08 63.2 90 33.3
Thecc.07G175400 Theobroma cacao HOM05D000003 ORTHO05D000004 1.8e-08 63.2 87 34.5
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-08 62.8 108 28.7
Nn8g39836 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.4e-08 62.8 89 34.8
Rhsim05G0074900 Rhododendron simsii HOM05D000542 ORTHO05D000202 2.4e-08 62.8 106 34.0
RhsimUnG0169300 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-08 62.8 107 31.8
Atru.chr6.785 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-08 62.4 96 37.5
AUR62007675 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.1e-08 62.4 81 34.6
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-08 62.4 98 31.6
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.1e-08 62.4 93 34.4
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 3.1e-08 62.4 111 32.4
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 3.1e-08 62.4 86 31.4
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 62.0 102 33.3
Aqoxy6G02497 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-08 62.0 91 35.2
Nn4g26182 Nelumbo nucifera HOM05D000003 ORTHO05D000004 4.1e-08 62.0 99 30.3
Rhsim12G0080100 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-08 62.0 106 33.0
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-08 61.6 88 31.8
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.4e-08 61.6 85 35.3
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-08 61.2 87 37.9
FvH4_3g22561 Fragaria vesca HOM05D000003 ORTHO05D000006 9.1e-08 60.8 87 33.3
FvH4_4g08951 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-07 60.5 88 31.8
QL01p031677 Quercus lobata HOM05D000537 ORTHO05D000004 1.2e-07 60.5 99 34.3
Atru.chr11.973 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 95 34.7
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.6e-07 60.1 97 36.1
Rhsim04G0211900 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-07 60.1 94 31.9
FvH4_2g12381 Fragaria vesca HOM05D000003 ORTHO05D000004 2.7e-07 59.3 90 38.9
Rhsim13G0061700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-07 59.3 85 36.5
FvH4_2g11452 Fragaria vesca HOM05D000003 ORTHO05D000004 3.5e-07 58.9 96 32.3
TPR.G17522 Trifolium pratense HOM05D000003 ORTHO05D000004 3.5e-07 58.9 109 28.4
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-07 58.5 88 34.1
CANSAT35G1823 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-07 58.5 96 28.1
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-07 58.5 98 30.6
Rhsim02G0069400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-07 58.5 83 33.7
Rhsim02G0166400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-07 58.5 81 35.8
Aqoxy1G03528 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.9e-07 58.2 68 36.8
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-07 58.2 87 29.9
Rhsim07G0154700 Rhododendron simsii HOM05D001582 ORTHO05D001598 5.9e-07 58.2 87 33.3
Atru.chr3.1907 Acer truncatum HOM05D000540 ORTHO05D000681 7.7e-07 57.8 82 34.1
QL07p038909 Quercus lobata HOM05D000003 ORTHO05D000004 7.7e-07 57.8 99 33.3
QL09p019305 Quercus lobata HOM05D000003 ORTHO05D000004 7.7e-07 57.8 99 30.3
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.7e-07 57.8 108 29.6
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 7.7e-07 57.8 105 30.5
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 93 35.5
Ah.06g188390 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.0e-06 57.4 96 30.2
FvH4_6g12311 Fragaria vesca HOM05D000003 ORTHO05D000004 1.0e-06 57.4 91 36.3
QL01p044414 Quercus lobata HOM05D000414 ORTHO05D000276 1.0e-06 57.4 90 32.2
QL11p050109 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-06 57.4 102 32.4
Rhsim09G0012500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.0e-06 57.4 81 32.1
Atru.chr7.591 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 96 31.2
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 88 37.5
CANSAT78G0787 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.0 82 36.6
Nn5g30273 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.3e-06 57.0 98 26.5
PSO063G4669 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 76 30.3
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 106 29.2
Atru.chr6.788 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 107 31.8
Rhsim05G0208700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 56.6 108 31.5
TWI77G0510 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.7e-06 56.6 95 33.7
Atru.chr5.3359 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 109 31.2
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 103 29.1
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 95 28.4
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-06 56.2 82 36.6
AUR62041578 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.3e-06 56.2 87 28.7
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-06 56.2 103 28.2
Atru.chr2.678 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 106 29.2
Atru.chr6.490 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 88 31.8
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 93 32.3
AUR62028018 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.9e-06 55.8 75 36.0
Atru.chr1.644 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 82 31.7
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 103 30.1
CANSAT11G2679 Cannabis sativa HOM05D000003 ORTHO05D000004 3.8e-06 55.5 88 34.1
AUR62041827 Chenopodium quinoa HOM05D000003 ORTHO05D000006 3.8e-06 55.5 82 31.7
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.8e-06 55.5 103 33.0
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 55.1 100 30.0
Atru.chr8.1026 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 55.1 92 32.6
CANSAT35G1852 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-06 55.1 100 32.0
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.0e-06 55.1 90 27.8
AUR62018115 Chenopodium quinoa HOM05D000003 ORTHO05D000004 5.0e-06 55.1 75 33.3
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-06 55.1 81 30.9
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 88 33.0
CSS0006002 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.6e-06 54.7 90 28.9
PSO384G2093 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 87 31.0
QL11p033599 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-06 54.7 95 31.6
TPR.G37077 Trifolium pratense HOM05D000003 ORTHO05D000004 6.6e-06 54.7 90 30.0
Atru.chr11.155 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 97 30.9
Atru.chr2.2096 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 101 29.7
Aa31LG11G5960 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 109 33.0


User provided reference genes

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