Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.2e-209 731.5 368 100.0
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 9.6e-153 543.9 361 76.5
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 1.8e-151 539.7 360 76.7
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 5.4e-140 501.5 359 71.6
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 7.9e-139 497.7 335 74.0
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 5.6e-137 491.5 360 70.3
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 9.6e-137 490.7 320 75.6
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 2.1e-136 489.6 330 74.8
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 9.0e-135 484.2 359 68.5
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 2.6e-134 482.6 367 68.4
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 2.6e-134 482.6 360 70.3
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 3.4e-134 482.3 357 69.2
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 7.6e-134 481.1 367 68.1
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 3.2e-132 475.7 359 69.6
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 6.0e-131 471.5 312 75.6
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 1.3e-130 470.3 359 67.1
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 3.9e-130 468.8 319 73.4
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 8.7e-130 467.6 319 73.0
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 8.7e-130 467.6 360 68.3
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 3.3e-129 465.7 355 67.6
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 4.3e-129 465.3 351 68.1
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 5.6e-129 464.9 360 66.7
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 7.4e-129 464.5 322 72.7
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 9.6e-129 464.2 319 73.4
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 2.6e-126 456.1 326 71.8
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 5.8e-126 454.9 356 66.9
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.0e-125 454.1 354 67.5
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.9e-125 452.6 351 66.4
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 4.2e-124 448.7 315 72.1
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 4.2e-124 448.7 323 70.9
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 7.1e-124 448.0 310 72.3
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 9.3e-124 447.6 320 70.0
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 9.3e-124 447.6 320 70.0
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 1.6e-123 446.8 318 70.1
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 3.5e-123 445.7 310 72.3
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 7.9e-123 444.5 374 63.6
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 1.3e-122 443.7 310 72.3
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 1.8e-122 443.4 323 70.0
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.8e-122 443.4 323 70.0
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 2.3e-122 443.0 319 71.5
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.0e-122 442.6 362 65.2
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 3.9e-122 442.2 307 71.7
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 5.1e-122 441.8 323 69.7
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 5.1e-122 441.8 323 69.3
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.1e-121 440.7 316 70.3
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 7.4e-121 438.0 307 71.3
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.3e-120 437.2 321 69.8
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 1.6e-120 436.8 319 67.4
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.8e-120 436.0 355 66.2
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 4.8e-120 435.3 335 64.8
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 8.2e-120 434.5 311 69.5
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 1.1e-119 434.1 317 70.3
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.8e-119 433.3 359 63.0
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 3.1e-119 432.6 345 64.9
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 4.1e-119 432.2 350 63.1
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 9.0e-119 431.0 326 68.1
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.2e-118 430.6 352 65.1
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 4.5e-118 428.7 318 68.9
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.0e-117 427.6 299 71.6
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 1.0e-117 427.6 321 67.6
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 6.5e-117 424.9 361 64.8
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.9e-113 413.3 360 61.4
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 1.9e-113 413.3 264 75.8
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 2.5e-113 412.9 360 61.4
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 2.5e-113 412.9 295 71.2
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 8.2e-112 407.9 360 61.1
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.4e-111 407.1 310 68.4
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 2.4e-111 406.4 321 66.7
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 4.1e-111 405.6 310 67.7
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 2.6e-110 402.9 314 65.0
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 4.5e-110 402.1 326 62.0
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 2.2e-109 399.8 431 52.4
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 6.5e-109 398.3 317 62.5
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.4e-108 397.1 314 62.7
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 2.5e-108 396.4 317 62.1
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 2.5e-108 396.4 312 64.1
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 5.5e-108 395.2 310 64.8
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 7.2e-108 394.8 303 63.4
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.2e-107 394.0 266 75.2
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.6e-107 393.7 318 61.9
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 2.7e-107 392.9 335 61.8
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 1.0e-106 391.0 332 58.7
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.8e-106 390.2 307 62.5
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.1e-105 387.5 316 61.7
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 2.0e-105 386.7 273 69.6
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 5.7e-105 385.2 317 59.6
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 5.7e-105 385.2 326 64.4
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.4e-103 380.6 309 62.1
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 1.2e-102 377.5 315 62.5
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 1.2e-102 377.5 312 63.1
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 9.4e-100 367.9 360 57.2
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.6e-99 367.1 306 62.7
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 4.7e-99 365.5 239 75.7
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.8e-98 363.6 327 59.9
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 5.2e-98 362.1 325 59.1
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 2.6e-97 359.8 318 59.4
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 1.4e-95 354.0 260 67.3
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 9.1e-95 351.3 303 62.4
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 2.3e-90 336.7 316 55.1
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 4.5e-86 322.4 324 57.4
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 4.1e-79 299.3 216 68.5
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 8.9e-66 255.0 254 59.1
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.7e-56 224.2 140 78.6
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 3.2e-55 219.9 242 53.3
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 4.6e-46 189.5 191 56.5
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 5.1e-45 186.0 348 37.6
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 6.6e-45 185.7 361 34.9
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 9.5e-44 181.8 299 40.1
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.4e-42 177.2 334 36.2
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 9.9e-41 171.8 302 33.8
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 2.4e-39 167.2 368 30.7
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 1.0e-37 161.8 236 42.8
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 3.6e-35 153.3 133 57.1
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.3e-29 134.8 188 47.3
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.7e-24 117.9 77 74.0
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 2.8e-19 100.5 275 30.5
Aqoxy3G02234 Aquilegia oxysepala HOM05D008675 ORTHO05D077583 2.2e-08 64.3 36 88.9


User provided reference genes

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