Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02906 Aquilegia oxysepala HOM05D001952 ORTHO05D005047 4.7e-169 597.8 313 100.0
TAR623G1191 Trochodendron aralioides HOM05D001952 ORTHO05D005047 1.4e-133 479.9 313 78.3
TAR633G1943 Trochodendron aralioides HOM05D001952 ORTHO05D005047 6.1e-132 474.6 313 77.0
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 9.1e-128 460.7 302 77.8
Nn2g10756 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.2e-127 460.3 313 75.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.2e-127 460.3 313 74.8
CSS0043642 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 4.5e-127 458.4 313 76.0
GSVIVG01016297001 Vitis vinifera HOM05D001952 ORTHO05D005047 1.0e-126 457.2 313 74.8
Actinidia38268 Actinidia chinensis HOM05D001952 ORTHO05D005047 1.4e-125 453.4 308 76.3
TWI38G1551 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 1.4e-125 453.4 313 74.8
Lj1C916T4 Lonicera japonica HOM05D001952 ORTHO05D005047 4.2e-125 451.8 313 73.5
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 1.2e-124 450.3 310 73.2
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla HOM05D001952 ORTHO05D005047 1.6e-124 449.9 306 76.1
RcHm_v2.0_Chr1g0363681 Rosa chinensis HOM05D001952 ORTHO05D005047 3.6e-124 448.7 313 72.8
Actinidia03051 Actinidia chinensis HOM05D001952 ORTHO05D005047 6.1e-124 448.0 305 76.7
QL08p056315 Quercus lobata HOM05D001952 ORTHO05D005047 1.0e-123 447.2 312 72.8
CiPaw.01G274000 Carya illinoinensis HOM05D001952 ORTHO05D005047 1.4e-123 446.8 313 73.8
TWI15G0762 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 3.0e-123 445.7 313 73.8
Potri.010G220900 Populus trichocarpa HOM05D001952 ORTHO05D005047 5.1e-123 444.9 313 72.8
Rhsim03G0124200 Rhododendron simsii HOM05D001952 ORTHO05D005047 2.6e-122 442.6 305 75.1
Rhsim09G0040900 Rhododendron simsii HOM05D001952 ORTHO05D005047 5.7e-122 441.4 305 74.8
PSO384G3798 Papaver somniferum HOM05D001952 ORTHO05D005047 7.4e-122 441.0 315 72.1
CSS0010121 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 9.7e-122 440.7 311 74.0
FAN10G0547 Fragaria x ananassa HOM05D001952 ORTHO05D005047 2.8e-121 439.1 313 71.6
Duzib106G0378 Durio zibethinus HOM05D001952 ORTHO05D005047 3.7e-121 438.7 294 73.8
PSO339G2303 Papaver somniferum HOM05D001952 ORTHO05D005047 4.8e-121 438.3 316 72.8
FAN03G1754 Fragaria x ananassa HOM05D001952 ORTHO05D005047 6.3e-121 438.0 313 71.2
Gohir.D10G215100 Gossypium hirsutum HOM05D001952 ORTHO05D005047 6.3e-121 438.0 298 73.5
Gorai.011G240600 Gossypium raimondii HOM05D001952 ORTHO05D005047 8.2e-121 437.6 298 73.5
Gohir.A10G207000 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.1e-120 437.2 298 73.2
FAN01G0922 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.4e-120 436.8 313 70.9
Thecc.10G071300 Theobroma cacao HOM05D001952 ORTHO05D005047 1.4e-120 436.8 302 72.2
Prupe.8G142500 Prunus persica HOM05D001952 ORTHO05D005047 2.4e-120 436.0 313 71.2
Manes.07G104300 Manihot esculenta HOM05D001952 ORTHO05D005047 3.1e-120 435.6 313 71.2
FvH4_7g19770 Fragaria vesca HOM05D001952 ORTHO05D005047 4.1e-120 435.3 313 70.9
THA.LOC104809877 Tarenaya hassleriana HOM05D001952 ORTHO05D005047 4.1e-120 435.3 309 71.5
MD07G1176100 Malus domestica HOM05D001952 ORTHO05D005047 5.3e-120 434.9 313 71.9
Lalb_Chr01g0010101 Lupinus albus HOM05D001952 ORTHO05D005047 3.4e-119 432.2 313 71.9
PSO339G4598 Papaver somniferum HOM05D001952 ORTHO05D005047 7.7e-119 431.0 315 70.8
PSO063G6730 Papaver somniferum HOM05D001952 ORTHO05D005047 1.0e-118 430.6 315 72.1
CsaV3_5G025750 Cucumis sativus L. HOM05D001952 ORTHO05D005047 1.7e-118 429.9 313 70.0
Sc20g0001940 Simmondsia chinensis HOM05D001952 ORTHO05D005047 1.7e-118 429.9 313 69.3
MELO3C002900.2 Cucumis melo HOM05D001952 ORTHO05D005047 2.9e-118 429.1 313 69.6
MBI07_g41454_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 2.9e-118 429.1 310 70.6
Atru.chr12.731 Acer truncatum HOM05D001952 ORTHO05D005047 3.8e-118 428.7 306 71.9
VMungo0464G0347 Vigna mungo HOM05D001952 ORTHO05D005047 3.8e-118 428.7 296 73.3
CANSAT56G1702 Cannabis sativa HOM05D001952 ORTHO05D005047 5.0e-118 428.3 313 69.6
Ciclev10032201m.g Citrus clementina HOM05D001952 ORTHO05D005047 5.0e-118 428.3 307 71.7
Phvul.004G071600 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 5.0e-118 428.3 296 73.6
Gohir.D04G003200 Gossypium hirsutum HOM05D001952 ORTHO05D005047 8.5e-118 427.6 298 70.8
Gorai.012G004300 Gossypium raimondii HOM05D001952 ORTHO05D005047 8.5e-118 427.6 298 70.8
vmacro07078 Vaccinium macrocarpon HOM05D001952 ORTHO05D005047 8.5e-118 427.6 313 72.8
Potri.008G041100 Populus trichocarpa HOM05D001952 ORTHO05D005047 1.6e-116 423.3 313 70.6
ATR0115G026 Amborella trichopoda HOM05D001952 ORTHO05D005047 2.1e-116 422.9 307 71.0
Gohir.A05G412900 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.1e-116 422.9 298 69.8
DCAR_006448 Daucus carota HOM05D001952 ORTHO05D005047 4.7e-116 421.8 350 64.3
HanXRQChr09g0246441 Helianthus annuus HOM05D001952 ORTHO05D005047 4.7e-116 421.8 308 70.8
Hund12040 Selenicereus undatus HOM05D001952 ORTHO05D005047 4.7e-116 421.8 307 70.4
MSTRG.27460 Avicennia marina HOM05D001952 ORTHO05D005047 6.1e-116 421.4 305 71.1
SalBow3G3659 Salvia bowleyana HOM05D001952 ORTHO05D005047 8.0e-116 421.0 314 70.7
MSTRG.8150 Avicennia marina HOM05D001952 ORTHO05D005047 3.9e-115 418.7 300 70.0
Lj2g0017031 Lotus japonicus HOM05D001952 ORTHO05D005047 3.9e-115 418.7 305 71.1
Sed0013357 Sechium edule HOM05D001952 ORTHO05D005047 5.2e-115 418.3 313 68.4
SGA_v2.0_scaffold341G49359 Striga asiatica HOM05D001952 ORTHO05D005047 5.2e-115 418.3 313 68.4
Glyma.16G145700 Glycine max HOM05D001952 ORTHO05D005047 1.5e-114 416.8 296 72.3
Cpa.g.sc53.62 Carica papaya HOM05D001952 ORTHO05D005047 3.3e-114 415.6 302 72.5
Peaxi162Scf00272g00023 Petunia axillaris HOM05D001952 ORTHO05D005047 3.3e-114 415.6 301 70.8
Sabra10G0170600 Salix brachista HOM05D001952 ORTHO05D005047 5.7e-114 414.8 348 64.4
Sopen04g018690 Solanum pennellii HOM05D001952 ORTHO05D005047 5.7e-114 414.8 304 70.1
Glyma.02G064500 Glycine max HOM05D001952 ORTHO05D005047 9.7e-114 414.1 313 70.3
TPR.G36683 Trifolium pratense HOM05D001952 ORTHO05D005047 2.8e-113 412.5 298 70.1
Solyc04g049180.3 Solanum lycopersicum HOM05D001952 ORTHO05D005047 4.8e-113 411.8 293 70.6
Ah.11g040520 Amaranthus hybridus HOM05D001952 ORTHO05D005047 8.2e-113 411.0 305 68.9
EL10Ac1g02054 Beta vulgaris HOM05D001952 ORTHO05D005047 8.2e-113 411.0 348 62.1
CAN.G4.5 Capsicum annuum HOM05D001952 ORTHO05D005047 1.4e-112 410.2 304 68.8
Lsat_1_v5_gn_9_68641 Lactuca sativa HOM05D001952 ORTHO05D005047 1.8e-112 409.8 311 68.5
PGR044G1956 Punica granatum HOM05D001952 ORTHO05D005047 1.8e-112 409.8 311 65.9
AUR62036746 Chenopodium quinoa HOM05D001952 ORTHO05D005047 2.4e-112 409.5 313 66.5
ECA232G3999 Erigeron canadensis HOM05D001952 ORTHO05D005047 3.1e-112 409.1 306 68.0
Aa31LG5G18490 Aethionema arabicum HOM05D001952 ORTHO05D005047 5.3e-112 408.3 309 67.0
Phvul.007G093800 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 5.3e-112 408.3 301 69.4
Psat6g185440 Pisum sativum HOM05D001952 ORTHO05D005047 1.2e-111 407.1 298 68.8
Eucgr.J01098 Eucalyptus grandis HOM05D001952 ORTHO05D005047 4.5e-111 405.2 307 66.8
ClCG09G020640 Citrullus lanatus HOM05D001952 ORTHO05D005047 5.9e-111 404.8 361 60.1
Sabra08G0027900 Salix brachista HOM05D001952 ORTHO05D005047 5.9e-111 404.8 344 64.2
COL.COLO4_23705 Corchorus olitorius HOM05D001952 ORTHO05D005047 1.7e-110 403.3 390 56.4
Sp3g06860 Schrenkiella parvula HOM05D001952 ORTHO05D005047 1.7e-110 403.3 299 68.6
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea HOM05D001952 ORTHO05D005047 6.5e-110 401.4 297 68.4
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea HOM05D001952 ORTHO05D005047 6.5e-110 401.4 297 68.4
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea HOM05D001952 ORTHO05D005047 6.5e-110 401.4 313 66.8
Carub.0003s0752 Capsella rubella HOM05D001952 ORTHO05D005047 6.5e-110 401.4 309 66.7
AL3G19330 Arabidopsis lyrata HOM05D001952 ORTHO05D005047 8.5e-110 401.0 309 66.7
Glyma.10G212100 Glycine max HOM05D001952 ORTHO05D005047 8.5e-110 401.0 300 68.7
HPP92_014675 Vanilla planifolia HOM05D001952 ORTHO05D005047 8.5e-110 401.0 306 65.7
C05p59390 Brassica napus HOM05D001952 ORTHO05D005047 1.9e-109 399.8 309 66.3
Gorai.013G026100 Gossypium raimondii HOM05D001952 ORTHO05D005047 2.5e-109 399.4 300 67.3
Nitab4.5_0000233g0070 Nicotiana tabacum HOM05D001952 ORTHO05D005047 3.2e-109 399.1 302 69.2
TPR.G1807 Trifolium pratense HOM05D001952 ORTHO05D005047 3.2e-109 399.1 290 68.3
BcaC05g29583 Brassica carinata HOM05D001952 ORTHO05D005047 4.2e-109 398.7 309 66.7
Nitab4.5_0001352g0010 Nicotiana tabacum HOM05D001952 ORTHO05D005047 5.5e-109 398.3 305 69.2
A05p40310 Brassica napus HOM05D001952 ORTHO05D005047 7.2e-109 397.9 312 66.0
BcaC09g47964 Brassica carinata HOM05D001952 ORTHO05D005047 9.4e-109 397.5 306 67.3
Medtr1g095490 Medicago truncatula HOM05D001952 ORTHO05D005047 1.2e-108 397.1 298 67.1
Duzib114G0604 Durio zibethinus HOM05D001952 ORTHO05D005047 1.6e-108 396.7 274 71.5
AT3G07950 Arabidopsis thaliana HOM05D001952 ORTHO05D005047 2.7e-108 396.0 299 66.9
Lj5g0021726 Lotus japonicus HOM05D001952 ORTHO05D005047 3.6e-108 395.6 308 66.6
Thhalv10021192m.g Eutrema salsugineum HOM05D001952 ORTHO05D005047 6.1e-108 394.8 314 65.9
CARHR082690 Cardamine hirsuta HOM05D001952 ORTHO05D005047 8.0e-108 394.4 309 66.0
BcaB04g21262 Brassica carinata HOM05D001952 ORTHO05D005047 1.0e-107 394.0 306 66.7
Gohir.D13G023300 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.0e-107 394.0 300 67.3
BcaB03g11556 Brassica carinata HOM05D000484 ORTHO05D005047 1.4e-107 393.7 290 67.9
BolC1t05516H Brassica oleracea HOM05D001952 ORTHO05D005047 1.4e-107 393.7 302 67.2
CSS0012304 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 1.8e-107 393.3 263 76.4
BolC5t34594H Brassica oleracea HOM05D001952 ORTHO05D005047 4.0e-107 392.1 302 66.6
Migut.F02000 Erythranthe guttata HOM05D001952 ORTHO05D005047 8.8e-107 391.0 312 66.7
SEGI_02403 Sequoiadendron giganteum HOM05D001952 ORTHO05D005047 9.7e-106 387.5 305 61.6
CDE10G0691 Ceratophyllum demersum HOM05D001952 ORTHO05D005047 8.2e-105 384.4 313 61.3
Oeu043934.2 Olea europaea HOM05D001952 ORTHO05D005047 8.2e-105 384.4 269 70.3
AUR62013854 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.0e-102 377.5 278 66.9
Lsat_1_v5_gn_8_19940 Lactuca sativa HOM05D001952 ORTHO05D005047 1.0e-102 377.5 309 64.1
Dinv31333 Davidia involucrata HOM05D001952 ORTHO05D005047 1.7e-102 376.7 310 65.8
CiPaw.02G174800 Carya illinoinensis HOM05D001952 ORTHO05D005047 2.9e-102 375.9 277 69.3
FAN06G0112 Fragaria x ananassa HOM05D001952 ORTHO05D005047 3.8e-102 375.6 260 71.5
Os07g0655400 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.8e-99 366.7 301 62.5
Zm00001eb110580 Zea mays HOM05D001952 ORTHO05D005047 2.3e-99 366.3 309 62.5
unitig_0.g2136 Utricularia gibba HOM05D001952 ORTHO05D005047 2.8e-97 359.4 302 61.6
Os03g0358200 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 4.1e-96 355.5 292 62.7
Cc09_g01990 Coffea canephora HOM05D001952 ORTHO05D005047 5.7e-90 335.1 232 72.8
Zm00001eb394380 Zea mays HOM05D001952 ORTHO05D005047 7.5e-90 334.7 270 61.1
ATR0559G188 Amborella trichopoda HOM05D001952 ORTHO05D005047 1.2e-87 327.4 277 58.5
Mapoly0066s0031 Marchantia polymorpha HOM05D001952 ORTHO05D005047 4.3e-85 318.9 287 54.4
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis HOM05D001952 ORTHO05D005047 2.3e-83 313.2 326 52.5
Gohir.A13G024400 Gossypium hirsutum HOM05D001952 ORTHO05D005047 3.1e-83 312.8 224 71.0
Os04g0103300 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.9e-80 303.5 295 52.9
Pp3c16_4780 Physcomitrium patens HOM05D001952 ORTHO05D005047 5.4e-80 302.0 316 52.5
Pp3c27_5280 Physcomitrium patens HOM05D001952 ORTHO05D005047 3.0e-78 296.2 316 52.2
SHI07338 Sapria himalayana HOM05D001952 ORTHO05D005047 3.9e-78 295.8 274 57.3
Zm00001eb418910 Zea mays HOM05D001952 ORTHO05D005047 1.5e-77 293.9 277 52.3
Zm00001eb089590 Zea mays HOM05D001952 ORTHO05D005047 2.5e-77 293.1 277 52.0
SMO140G0041 Selaginella moellendorffii HOM05D001952 ORTHO05D005047 1.6e-76 290.4 297 52.2
unitig_736.g22520 Utricularia gibba HOM05D001952 ORTHO05D005047 1.6e-71 273.9 283 51.9
Zm00001eb017450 Zea mays HOM05D001952 ORTHO05D005047 2.7e-71 273.1 228 61.8
Nn2g10413 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.5e-69 266.5 231 58.4
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea HOM05D001952 ORTHO05D005047 3.3e-69 266.2 207 66.2
SalBow4G0807 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.2e-68 264.2 303 51.2
MBI17_g17186_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 1.1e-67 261.2 324 50.9
Lalb_Chr19g0129631 Lupinus albus HOM05D001952 ORTHO05D005047 1.9e-61 240.4 199 66.3
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 7.3e-61 238.4 231 54.1
Oeu052143.1 Olea europaea HOM05D001952 ORTHO05D005047 4.9e-57 225.7 150 74.0
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea HOM05D001952 ORTHO05D005047 2.4e-56 223.4 206 58.3
CBR_g52157 Chara braunii HOM05D001952 ORTHO05D005047 3.2e-56 223.0 210 51.9
ECA233G5952 Erigeron canadensis HOM05D001952 ORTHO05D005047 4.2e-56 222.6 192 60.9
unitig_747.g21458 Utricularia gibba HOM05D001952 ORTHO05D005047 1.5e-50 204.1 186 59.1
MD01G1110300 Malus domestica HOM05D001952 ORTHO05D005047 1.3e-49 201.1 150 68.0
Migut.F01769 Erythranthe guttata HOM05D001952 ORTHO05D005047 2.3e-46 190.3 152 63.2
Cre17.g706850 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D005047 5.6e-45 185.7 278 36.3
MCO03G295 Micromonas commoda HOM05D001952 ORTHO05D005047 4.0e-35 152.9 262 33.6
MCO07G038 Micromonas commoda HOM05D001952 ORTHO05D005047 1.4e-32 144.4 314 30.6
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea HOM05D001952 ORTHO05D005047 2.9e-25 120.2 105 62.9
PRCOL_00004972 Prasinoderma coloniale HOM05D001952 ORTHO05D005047 5.5e-24 115.9 210 33.3
Nn1g06899 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.7e-23 113.6 76 75.0
Cfa025342 Carpinus fangiana HOM05D001952 ORTHO05D005047 6.7e-22 109.0 289 29.1
PRCOL_00006255 Prasinoderma coloniale HOM05D000177 ORTHO05D002683 2.5e-21 107.1 284 30.3
Ca_12760_v3 Cicer arietinum L. HOM05D001952 ORTHO05D005047 7.4e-21 105.5 115 50.4
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea HOM05D001952 ORTHO05D005047 2.8e-20 103.6 127 50.4
MBI19_g20119_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 4.6e-15 86.3 187 38.0
CBR_g52155 Chara braunii HOM05D001952 ORTHO05D134355 2.2e-09 67.4 59 57.6
unitig_747.g21459 Utricularia gibba HOM05D001952 ORTHO05D005047 3.9e-06 56.6 43 58.1


User provided reference genes

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