Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.4e-227 792.7 439 100.0
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 2.3e-52 210.7 244 54.5
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 3.7e-50 203.4 241 50.6
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 6.9e-49 199.1 342 41.5
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.2e-46 190.3 244 50.0
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.6e-45 188.0 248 49.6
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.8e-44 184.5 255 46.7
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 8.7e-44 182.2 164 62.2
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 8.7e-44 182.2 244 47.5
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 3.3e-43 180.3 336 40.8
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 4.3e-43 179.9 228 48.2
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 7.4e-43 179.1 110 81.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 9.6e-43 178.7 221 47.1
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 9.6e-43 178.7 124 75.0
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.3e-42 178.3 137 68.6
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.3e-42 178.3 124 75.0
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 4.8e-42 176.4 173 59.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 6.2e-42 176.0 242 47.9
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 6.2e-42 176.0 379 38.0
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 8.2e-42 175.6 459 34.6
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.2e-42 175.6 253 48.2
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 8.2e-42 175.6 375 38.1
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 8.2e-42 175.6 478 36.0
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 1.1e-41 175.3 378 39.2
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.1e-41 175.3 340 38.2
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.4e-41 174.9 133 72.2
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 1.4e-41 174.9 425 36.7
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.4e-41 174.9 157 62.4
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.8e-41 174.5 449 33.4
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.8e-41 174.5 124 71.0
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 3.1e-41 173.7 372 37.9
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 4.1e-41 173.3 210 53.8
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 4.1e-41 173.3 104 83.7
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 5.3e-41 172.9 190 55.3
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 5.3e-41 172.9 257 46.3
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 5.3e-41 172.9 379 37.7
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 6.9e-41 172.6 256 44.9
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 6.9e-41 172.6 134 69.4
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 6.9e-41 172.6 176 58.0
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 2.0e-40 171.0 104 80.8
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 2.6e-40 170.6 447 36.7
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 4.5e-40 169.9 494 35.0
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.3e-39 168.3 241 47.7
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 2.2e-39 167.5 225 45.3
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 2.9e-39 167.2 182 53.3
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 3.8e-39 166.8 342 39.5
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 5.0e-39 166.4 454 33.3
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 5.0e-39 166.4 113 75.2
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 5.0e-39 166.4 295 41.0
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 5.0e-39 166.4 457 31.5
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.9e-38 164.5 449 35.9
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.2e-38 163.3 87 89.7
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 5.5e-38 162.9 450 34.4
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-37 161.8 472 35.8
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.6e-37 159.8 386 36.8
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 4.6e-37 159.8 130 67.7
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 6.1e-37 159.5 338 39.6
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 7.9e-37 159.1 244 45.5
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.3e-36 158.3 380 36.1
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.3e-36 158.3 278 42.1
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.3e-36 158.3 259 44.8
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.3e-36 157.5 222 46.8
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.3e-36 157.5 442 33.9
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.3e-36 157.5 129 67.4
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 3.0e-36 157.1 160 58.1
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 3.0e-36 157.1 469 34.3
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 3.9e-36 156.8 432 36.3
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 5.1e-36 156.4 325 40.3
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 5.1e-36 156.4 237 46.4
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 6.7e-36 156.0 436 34.6
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 8.7e-36 155.6 466 36.3
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 8.7e-36 155.6 443 33.9
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 8.7e-36 155.6 278 41.7
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 1.1e-35 155.2 475 35.2
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.9e-35 154.5 119 68.1
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 9.7e-35 152.1 119 70.6
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.3e-34 151.8 324 38.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 1.6e-34 151.4 263 43.3
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 2.2e-34 151.0 119 66.4
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 2.8e-34 150.6 108 69.4
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 6.3e-34 149.4 430 34.0
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 8.2e-34 149.1 509 32.4
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 4.1e-33 146.7 119 65.5
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 6.9e-33 146.0 203 46.8
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.2e-32 145.2 452 31.4
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.5e-32 144.8 238 43.3
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.5e-32 144.8 165 53.9
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 7.7e-32 142.5 113 66.4
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 7.7e-32 142.5 109 67.9
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 7.7e-32 142.5 113 66.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 7.7e-32 142.5 113 66.4
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 7.7e-32 142.5 109 67.9
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.0e-31 142.1 109 67.9
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.3e-31 141.7 122 64.8
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 1.7e-31 141.4 491 29.5
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 2.2e-31 141.0 330 37.9
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.2e-31 141.0 228 42.5
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 6.5e-31 139.4 157 51.0
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 8.5e-31 139.0 106 65.1
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.4e-30 138.3 173 53.8
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.4e-30 138.3 504 29.8
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 2.5e-30 137.5 453 32.2
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 4.2e-30 136.7 150 52.7
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.7e-29 134.0 178 46.1
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 7.9e-29 132.5 451 30.8
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.0e-28 130.6 103 65.0
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.0e-28 130.6 103 65.0
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 9.7e-27 125.6 244 39.3
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 9.7e-27 125.6 244 39.3
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.2e-26 124.4 97 62.9
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 3.7e-26 123.6 120 55.8
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.5e-24 118.2 130 50.0
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 1.0e-23 115.5 101 63.4
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-22 110.9 76 68.4
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 7.2e-22 109.4 98 63.3
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 9.4e-22 109.0 101 62.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.6e-21 108.2 251 36.7
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 2.3e-20 104.4 114 54.4
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.1e-19 102.1 62 77.4
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.7e-18 98.2 226 36.3
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 7.0e-17 92.8 443 29.1
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.8e-12 78.2 95 54.7
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.8e-12 78.2 215 36.3
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 3.0e-12 77.4 55 69.1
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 9.7e-11 72.4 451 25.5
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 3.7e-10 70.5 323 29.1
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.1e-09 67.4 63 61.9
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 5.9e-08 63.2 34 79.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 5.9e-08 63.2 34 79.4
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.0e-07 62.4 396 29.3


User provided reference genes

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