Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.4e-140 503.1 277 100.0
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 7.9e-75 284.6 274 61.3
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 9.6e-73 277.7 274 58.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.3e-72 277.3 270 59.3
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 2.8e-72 276.2 269 58.0
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 2.7e-67 259.6 320 50.6
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 2.7e-67 259.6 274 54.4
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 4.6e-67 258.8 268 56.0
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 4.6e-67 258.8 268 56.0
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.3e-66 257.3 274 55.5
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.8e-64 248.8 276 53.3
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.1e-63 247.7 270 53.3
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 2.4e-63 246.5 268 54.9
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.1e-63 246.1 270 52.2
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 6.9e-63 245.0 276 52.5
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 9.0e-63 244.6 274 52.2
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 2.0e-62 243.4 273 51.6
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 2.0e-62 243.4 274 54.7
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.9e-60 236.9 272 51.8
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 4.2e-60 235.7 268 52.2
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.2e-59 234.2 270 51.9
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.2e-59 234.2 271 51.7
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.1e-59 231.9 270 51.5
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 6.1e-59 231.9 274 51.5
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 7.9e-59 231.5 265 52.5
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 7.9e-59 231.5 274 53.6
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-58 230.3 272 50.4
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.3e-58 229.9 271 50.9
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 3.0e-58 229.6 275 49.8
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 3.9e-58 229.2 275 51.6
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 8.7e-58 228.0 224 55.4
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.5e-57 227.3 214 57.5
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.5e-57 226.5 270 49.6
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 2.5e-57 226.5 270 49.6
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 2.5e-57 226.5 274 49.6
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.3e-57 226.1 270 49.6
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 4.3e-57 225.7 274 50.0
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 9.7e-57 224.6 274 49.6
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 1.6e-56 223.8 270 49.3
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 2.2e-56 223.4 270 48.5
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 2.2e-56 223.4 270 49.3
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 2.8e-56 223.0 270 47.4
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 3.7e-56 222.6 274 50.0
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 6.3e-56 221.9 232 52.6
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 6.3e-56 221.9 276 47.5
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 6.3e-56 221.9 270 49.3
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 8.2e-56 221.5 270 47.8
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.1e-55 221.1 269 50.2
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.5e-54 217.2 274 48.2
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 2.0e-54 216.9 274 49.3
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 4.5e-54 215.7 263 47.9
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 4.5e-54 215.7 274 48.5
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.9e-54 215.3 278 50.4
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.4e-52 210.7 270 47.4
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.2e-51 207.6 270 48.1
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 2.7e-51 206.5 227 52.9
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 4.6e-51 205.7 268 47.4
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 5.1e-50 202.2 269 46.8
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 8.8e-50 201.4 270 48.1
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 7.4e-49 198.4 253 47.0
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 4.8e-48 195.7 253 46.6
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 4.8e-48 195.7 190 57.9
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 4.8e-48 195.7 274 46.4
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 8.2e-48 194.9 258 46.9
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 4.1e-47 192.6 228 50.4
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 9.1e-47 191.4 273 47.3
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 5.0e-45 185.7 278 46.0
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 1.4e-44 184.1 270 44.8
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.9e-44 183.7 269 43.9
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 4.2e-44 182.6 200 53.5
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 7.2e-44 181.8 226 46.9
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.5e-41 174.1 224 46.0
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 5.7e-41 172.2 301 40.5
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 2.2e-40 170.2 231 44.2
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.8e-39 167.2 255 45.1
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 8.5e-37 158.3 199 49.2
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 7.2e-36 155.2 149 60.4
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.6e-35 154.1 145 60.0
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.1e-35 153.7 270 41.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.2e-33 147.9 274 39.4
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.0e-33 147.1 269 39.0
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.4e-31 141.0 237 39.7
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 3.5e-30 136.3 139 54.7
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.2e-28 129.8 151 49.7
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 4.2e-28 129.4 124 60.5
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 7.2e-28 128.6 143 54.5
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.7e-27 126.7 231 39.8
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 2.0e-22 110.5 151 43.7
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 7.7e-22 108.6 117 56.4
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 3.4e-17 93.2 78 62.8
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 2.4e-15 87.0 97 56.7
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 3.1e-15 86.7 116 40.5
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 4.5e-14 82.8 100 46.0
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.7e-13 80.9 169 36.1
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 1.5e-12 77.8 228 29.4
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 1.0e-10 71.6 122 41.0
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 1.2e-09 68.2 246 27.2
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.2e-08 63.9 130 37.7
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 7.0e-07 58.9 66 43.9
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 2.0e-06 57.4 61 45.9


User provided reference genes

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