Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 5.9e-199 697.6 419 100.0
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.4e-67 261.2 478 44.4
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 5.0e-65 252.7 454 48.0
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.2e-60 237.3 303 51.8
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 7.0e-59 232.3 246 58.5
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 7.8e-58 228.8 435 46.7
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 1.0e-57 228.4 460 42.4
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.5e-56 223.8 303 47.9
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.3e-56 223.4 462 42.9
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 1.0e-54 218.4 440 44.5
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 2.3e-54 217.2 480 40.2
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 2.3e-54 217.2 360 46.9
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 6.8e-54 215.7 348 47.7
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 8.9e-54 215.3 338 47.6
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 2.0e-53 214.2 346 48.0
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 9.8e-53 211.8 372 46.0
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 9.8e-53 211.8 342 48.5
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 1.3e-52 211.5 314 49.0
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.2e-52 210.7 323 47.4
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 2.9e-52 210.3 348 49.7
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 3.7e-52 209.9 327 45.6
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 4.9e-52 209.5 436 42.4
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 8.3e-52 208.8 362 46.1
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.1e-51 208.4 359 46.5
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.9e-51 207.6 391 44.0
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 1.9e-51 207.6 446 43.9
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 3.2e-51 206.8 452 39.2
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 3.2e-51 206.8 452 39.2
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 4.1e-51 206.5 442 45.7
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 5.4e-51 206.1 359 46.0
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 7.0e-51 205.7 347 42.9
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 7.0e-51 205.7 354 44.9
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.2e-50 204.9 308 46.4
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 3.5e-50 203.4 351 46.4
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 7.8e-50 202.2 297 48.5
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 1.7e-49 201.1 486 41.4
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 3.0e-49 200.3 298 48.0
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 3.0e-49 200.3 476 37.8
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 5.0e-49 199.5 359 46.2
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 6.6e-49 199.1 297 48.5
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 8.6e-49 198.7 428 41.8
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.9e-48 197.6 492 40.0
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 1.9e-48 197.6 365 43.0
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 3.3e-48 196.8 298 49.3
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 4.3e-48 196.4 445 40.9
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 4.3e-48 196.4 445 40.9
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 7.3e-48 195.7 366 45.4
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 7.3e-48 195.7 431 41.8
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.2e-47 194.9 356 41.9
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.2e-47 194.9 337 46.0
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 4.7e-47 193.0 312 46.8
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 6.2e-47 192.6 355 46.5
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 6.2e-47 192.6 329 45.9
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.1e-46 191.8 339 47.2
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.4e-46 191.4 450 41.3
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 3.1e-46 190.3 354 43.5
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 4.0e-46 189.9 364 45.1
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.0e-46 189.9 361 44.9
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 4.0e-46 189.9 383 41.3
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 6.8e-46 189.1 459 38.3
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 6.8e-46 189.1 311 47.3
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.5e-45 188.0 446 41.5
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.6e-45 187.2 411 40.6
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 3.4e-45 186.8 462 42.2
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 4.4e-45 186.4 504 37.7
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 7.5e-45 185.7 306 48.0
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 4.9e-44 183.0 307 45.3
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 6.4e-44 182.6 377 42.2
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 1.4e-43 181.4 461 34.5
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.9e-43 181.0 298 48.7
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.9e-43 181.0 111 77.5
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 2.4e-43 180.6 343 46.4
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 2.4e-43 180.6 491 38.3
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 3.2e-43 180.3 429 40.1
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 1.2e-42 178.3 310 44.2
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.6e-42 177.9 343 46.1
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.6e-42 177.9 356 46.1
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 3.5e-42 176.8 343 45.8
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 4.6e-42 176.4 218 50.9
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 6.0e-42 176.0 395 39.5
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 7.8e-42 175.6 307 45.3
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 8.6e-41 172.2 237 47.3
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 1.5e-40 171.4 349 44.1
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.5e-40 171.4 397 37.8
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.5e-40 171.4 404 40.3
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 1.9e-40 171.0 355 42.8
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 7.3e-40 169.1 132 70.5
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 3.6e-39 166.8 343 38.2
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-38 165.2 102 79.4
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 1.1e-38 165.2 375 40.3
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 2.3e-38 164.1 461 35.6
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 4.0e-38 163.3 94 80.9
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 8.9e-38 162.2 426 37.8
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 2.6e-37 160.6 354 39.5
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 5.8e-37 159.5 468 35.5
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 2.2e-36 157.5 102 76.5
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 2.9e-36 157.1 110 73.6
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 5.4e-35 152.9 100 76.0
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 6.0e-34 149.4 92 80.4
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 4.7e-31 139.8 271 36.2
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 1.8e-30 137.9 245 40.8
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 7.6e-29 132.5 76 85.5
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 4.9e-28 129.8 237 41.4
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.3e-25 120.9 274 41.2
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 3.3e-24 117.1 474 31.2
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 9.6e-24 115.5 377 34.7
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.6e-23 114.8 63 84.1
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 1.5e-21 108.2 380 34.5
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 3.4e-21 107.1 135 45.9
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 4.4e-21 106.7 265 40.4
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 7.6e-21 105.9 65 80.0
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 3.8e-20 103.6 289 32.5
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 1.4e-19 101.7 54 85.2
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 6.6e-17 92.8 54 81.5
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 2.5e-16 90.9 54 79.6
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 6.2e-15 86.3 53 75.5
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.8e-14 84.7 239 40.2
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 4.5e-13 80.1 61 60.7
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 1.0e-09 68.9 247 31.2
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 7.4e-08 62.8 144 30.6
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 38.0
MCO07G543 Micromonas commoda HOM05D006498 ORTHO05D006377 4.0e-06 57.0 67 44.8


User provided reference genes

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