Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.0e-47 193.0 92 100.0
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 2.8e-37 158.3 92 82.6
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 5.9e-35 150.6 92 79.3
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 6.5e-34 147.1 92 72.8
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.1e-33 146.4 92 76.1
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.5e-33 146.0 92 73.9
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 4.2e-33 144.4 92 73.9
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 5.5e-33 144.1 86 73.3
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 5.5e-33 144.1 92 73.9
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 5.5e-33 144.1 88 70.5
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 5.5e-33 144.1 88 70.5
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 5.5e-33 144.1 90 72.2
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 3.6e-32 141.4 92 70.7
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 4.7e-32 141.0 91 72.5
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 6.1e-32 140.6 89 73.0
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 6.1e-32 140.6 91 71.4
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.0e-31 139.8 92 72.8
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.0e-31 139.8 89 71.9
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 1.0e-31 139.8 92 71.7
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.0e-31 139.8 92 71.7
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 2.3e-31 138.7 92 70.7
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 3.0e-31 138.3 89 71.9
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 4.0e-31 137.9 92 70.7
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 5.2e-31 137.5 94 71.3
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 5.2e-31 137.5 89 71.9
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 3.3e-30 134.8 89 69.7
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 4.4e-30 134.4 92 66.3
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 4.4e-30 134.4 92 66.3
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 4.4e-30 134.4 92 67.4
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 5.7e-30 134.0 93 72.0
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 5.7e-30 134.0 90 66.7
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 9.7e-30 133.3 85 70.6
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 1.3e-29 132.9 92 67.4
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.3e-29 132.9 90 66.7
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 2.2e-29 132.1 92 70.7
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 2.2e-29 132.1 92 70.7
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.2e-29 132.1 92 68.5
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 2.2e-29 132.1 92 67.4
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 2.8e-29 131.7 94 67.0
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 2.8e-29 131.7 89 68.5
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 2.8e-29 131.7 92 66.3
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 3.7e-29 131.3 92 68.5
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 3.7e-29 131.3 92 66.3
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 3.7e-29 131.3 92 63.0
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 4.8e-29 131.0 82 70.7
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 4.8e-29 131.0 88 62.5
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 4.8e-29 131.0 88 62.5
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 6.3e-29 130.6 92 70.7
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 6.3e-29 130.6 92 67.4
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.3e-29 130.6 92 67.4
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.3e-29 130.6 92 67.4
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 8.2e-29 130.2 89 68.5
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.1e-28 129.8 92 64.1
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.1e-28 129.8 92 65.2
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 65.2
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 3.1e-28 128.3 88 65.9
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 4.1e-28 127.9 90 66.7
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.3e-28 127.5 92 64.1
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 5.3e-28 127.5 89 65.2
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.3e-28 127.5 84 67.9
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 9.1e-28 126.7 92 64.1
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 1.6e-27 125.9 88 64.8
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 2.0e-27 125.6 92 63.0
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 2.0e-27 125.6 90 65.6
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 2.0e-27 125.6 90 65.6
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.7e-27 125.2 92 64.1
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 4.5e-27 124.4 92 64.1
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.5e-27 124.4 92 60.9
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.9e-27 124.0 92 62.0
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 5.9e-27 124.0 92 62.0
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 7.7e-27 123.6 92 62.0
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.0e-26 123.2 92 59.8
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 63.6
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 63.6
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 92 64.1
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 92 64.1
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.7e-26 122.5 92 64.1
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.7e-26 122.5 92 64.1
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 92 60.9
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 84 66.7
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 2.2e-26 122.1 92 63.0
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 92 63.0
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 92 63.0
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 2.2e-26 122.1 92 63.0
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 2.2e-26 122.1 92 63.0
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 2.2e-26 122.1 91 62.6
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.8e-26 121.3 84 66.7
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 3.8e-26 121.3 92 63.0
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 5.0e-26 120.9 92 63.0
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 8.5e-26 120.2 88 59.1
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 1.5e-25 119.4 90 58.9
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 1.9e-25 119.0 91 61.5
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.9e-25 119.0 92 63.0
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 1.9e-25 119.0 88 61.4
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 2.5e-25 118.6 92 62.0
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 2.5e-25 118.6 92 62.0
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 2.5e-25 118.6 88 62.5
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 3.2e-25 118.2 88 61.4
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 3.2e-25 118.2 94 60.6
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 4.2e-25 117.9 89 66.3
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 1.2e-24 116.3 92 60.9
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.6e-24 115.9 91 58.2
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.6e-24 115.9 91 58.2
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.6e-24 114.8 87 59.8
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 4.7e-24 114.4 92 58.7
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-24 114.4 84 60.7
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-24 114.4 85 61.2
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-24 114.4 84 60.7
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-24 114.4 84 60.7
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 1.0e-23 113.2 84 59.5
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 1.8e-23 112.5 92 56.5
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.3e-23 112.1 84 59.5
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 3.0e-23 111.7 88 58.0
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 4.0e-23 111.3 88 60.2
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 8.8e-23 110.2 88 59.1
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 2.6e-22 108.6 89 57.3
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 5.7e-22 107.5 92 56.5
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.7e-21 104.8 91 53.8
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 1.3e-18 96.3 67 68.7
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 2.2e-18 95.5 83 50.6
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.9e-18 95.1 61 73.8
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 1.2e-16 89.7 86 48.8
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 2.8e-16 88.6 60 65.0
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.6e-16 88.2 60 65.0
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 4.0e-15 84.7 75 52.0
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.6e-14 82.0 58 63.8
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 8.3e-13 77.0 63 55.6
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 4.1e-12 74.7 62 54.8
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 5.4e-12 74.3 57 52.6
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 5.4e-12 74.3 83 39.8
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 8.6e-10 67.0 43 67.4
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 2.5e-09 65.5 79 44.3
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.3e-09 65.1 45 62.2
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 9.5e-09 63.5 43 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.1e-08 62.4 78 38.5
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 6.1e-08 60.8 43 62.8
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 6.1e-08 60.8 43 62.8
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 89 37.1
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 89 37.1
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.0e-07 58.5 89 36.0
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 5.2e-07 57.8 90 33.3
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 8.9e-07 57.0 71 39.4
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 8.9e-07 57.0 71 39.4
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.5e-06 53.9 87 29.9


User provided reference genes

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