Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 4.0e-254 881.3 587 100.0
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 7.5e-184 647.9 563 73.2
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 6.2e-178 628.2 563 70.9
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 2.3e-172 609.8 566 68.2
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 3.3e-171 605.9 566 70.5
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 7.1e-166 588.2 567 64.7
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 1.5e-163 580.5 582 64.8
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 3.6e-162 575.9 567 64.4
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 3.1e-161 572.8 583 63.0
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 8.9e-161 571.2 564 64.2
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.2e-160 570.9 563 66.1
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 3.4e-160 569.3 569 67.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.3e-159 567.4 539 69.0
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 1.0e-156 557.8 566 63.6
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 1.3e-156 557.4 561 67.6
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 2.3e-156 556.6 569 62.9
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 3.9e-156 555.8 564 64.7
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 8.6e-156 554.7 566 63.3
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 1.9e-155 553.5 562 64.9
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 2.5e-155 553.1 568 64.4
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 2.1e-154 550.1 566 62.7
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.1e-154 550.1 557 63.6
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 4.7e-154 548.9 566 62.9
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.5e-152 543.9 511 65.8
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 2.0e-152 543.5 558 62.7
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 3.4e-152 542.7 568 63.0
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 3.8e-151 539.3 566 65.4
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 4.9e-151 538.9 564 63.5
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 4.9e-151 538.9 580 64.3
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 8.4e-151 538.1 561 61.1
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 3.2e-150 536.2 566 59.9
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 7.1e-150 535.0 561 63.6
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 7.1e-150 535.0 561 63.6
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 9.3e-150 534.6 503 70.4
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 4.6e-149 532.3 563 63.6
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 1.0e-148 531.2 565 63.9
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 5.1e-148 528.9 562 62.6
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 6.6e-148 528.5 641 54.8
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 6.6e-148 528.5 563 61.5
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 1.1e-147 527.7 546 59.7
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 9.6e-147 524.6 561 61.9
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 2.8e-146 523.1 570 63.7
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.4e-145 520.0 505 69.5
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 5.3e-145 518.8 475 71.2
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 9.0e-145 518.1 529 65.8
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.5e-144 517.3 570 59.1
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 9.9e-144 514.6 564 64.2
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.9e-143 513.1 576 61.5
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 3.8e-143 512.7 511 62.0
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 4.9e-143 512.3 599 57.9
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 6.4e-143 511.9 584 61.6
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.1e-142 511.1 565 54.3
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.4e-142 510.8 564 56.7
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 2.4e-142 510.0 513 61.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.4e-142 508.8 576 56.8
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 7.1e-142 508.4 565 59.3
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 9.3e-142 508.1 565 59.6
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 1.6e-141 507.3 562 62.3
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 1.6e-141 507.3 566 59.5
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 2.1e-141 506.9 521 60.8
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 7.9e-141 505.0 566 59.5
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.7e-140 503.8 563 59.3
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 6.2e-138 495.4 562 59.8
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 1.1e-137 494.6 564 58.5
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 3.4e-136 489.6 611 52.0
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 1.3e-135 487.6 517 65.0
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.3e-135 487.6 577 53.2
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 4.9e-135 485.7 597 55.6
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 7.9e-133 478.4 509 63.1
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 1.3e-132 477.6 582 54.8
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.8e-132 477.2 557 60.1
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.1e-131 474.6 560 53.0
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.5e-131 473.4 507 64.7
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 2.1e-130 470.3 562 52.3
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.7e-127 460.7 497 57.7
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 4.6e-125 452.6 564 50.9
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.3e-124 451.1 593 50.6
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.3e-123 446.4 559 50.6
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 4.3e-123 446.0 458 64.4
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 5.7e-123 445.7 572 55.1
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 8.2e-122 441.8 303 76.6
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 5.9e-120 435.6 302 76.2
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 2.2e-119 433.7 544 51.5
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 2.1e-117 427.2 570 57.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 2.1e-117 427.2 587 47.5
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 6.1e-117 425.6 577 53.4
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.3e-116 424.5 572 54.7
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 6.7e-116 422.2 514 51.6
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 3.4e-112 409.8 566 56.2
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 3.4e-112 409.8 302 71.9
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 2.2e-111 407.1 567 57.3
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 1.4e-110 404.4 301 72.1
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.0e-108 398.3 467 61.0
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 3.7e-106 389.8 560 54.1
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 1.5e-104 384.4 565 52.6
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 2.9e-103 380.2 566 51.2
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 5.0e-103 379.4 569 52.0
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 2.5e-102 377.1 566 51.1
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 2.5e-102 377.1 566 51.1
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 2.7e-101 373.6 513 54.6
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 4.7e-101 372.9 449 56.3
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 5.9e-96 355.9 490 57.1
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 9.4e-86 322.0 231 71.0
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 1.3e-82 311.6 193 84.5
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 8.5e-79 298.9 192 79.2
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 2.1e-77 294.3 372 63.7
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 1.0e-76 292.0 194 75.3
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.4e-76 291.6 166 96.4
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 5.0e-63 246.5 219 57.5
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 1.5e-62 245.0 308 47.4
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 5.6e-62 243.0 212 59.0
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 5.6e-62 243.0 219 58.0
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 8.0e-61 239.2 213 58.2
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 7.0e-57 226.1 298 45.6
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 1.2e-56 225.3 250 49.6
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 1.0e-55 222.2 215 57.2
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.7e-47 194.9 168 62.5
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 2.3e-47 194.5 231 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.2e-43 182.2 232 45.7
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 2.0e-43 181.4 219 48.9
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 4.4e-43 180.3 302 40.1
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 7.6e-43 179.5 282 41.1
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 1.3e-39 168.7 149 67.8
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 3.4e-35 154.1 146 54.8
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 4.9e-34 150.2 106 74.5
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 2.6e-27 127.9 194 43.3
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 1.6e-24 118.6 103 67.0
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 6.0e-24 116.7 119 58.0
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 4.3e-22 110.5 65 78.5
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 2.8e-21 107.8 69 78.3
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 3.7e-21 107.5 219 39.3
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 3.4e-19 100.9 102 66.7
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.1e-17 95.9 91 52.7
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 4.2e-17 94.0 133 45.1
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 4.6e-16 90.5 77 62.3
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 5.1e-15 87.0 152 38.2
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.5e-14 85.5 103 58.3
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 2.5e-14 84.7 85 54.1
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 7.4e-14 83.2 181 38.7
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 2.8e-13 81.3 110 49.1
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 4.8e-13 80.5 69 59.4
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 5.8e-11 73.6 68 52.9
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 5.8e-11 73.6 62 62.9
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 5.8e-11 73.6 46 71.7
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 5.8e-11 73.6 249 30.5
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 1.0e-10 72.8 115 40.9
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.1e-09 69.3 110 40.9
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.9e-09 68.6 70 48.6
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 2.5e-09 68.2 113 41.6
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 3.2e-09 67.8 39 82.1
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 3.2e-09 67.8 39 82.1
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 3.2e-09 67.8 39 82.1
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 5.5e-09 67.0 40 80.0
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 7.1e-09 66.6 44 70.5
Psat0s1227g0040 Pisum sativum HOM05D000280 ORTHO05D015801 2.1e-08 65.1 58 60.3
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 4.6e-08 63.9 49 67.3
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 6.0e-08 63.5 47 66.0
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 1.0e-07 62.8 43 74.4
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 1.5e-06 58.9 68 58.8
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.9e-06 58.5 54 57.4
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 3.3e-06 57.8 40 77.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 3.3e-06 57.8 40 77.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 3.3e-06 57.8 40 77.5


User provided reference genes

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