Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02774 Aquilegia oxysepala HOM05D016868 ORTHO05D016554 1.4e-66 256.1 129 100.0
TAR626G0187 Trochodendron aralioides HOM05D016868 ORTHO05D016554 6.5e-32 141.0 134 54.5
MBI16_g10336_MAGBIO Magnolia biondii HOM05D016868 ORTHO05D016554 7.8e-25 117.5 134 50.7
GSVIVG01035549001 Vitis vinifera HOM05D016868 ORTHO05D016554 5.6e-23 111.3 134 48.5
PSO229G0064 Papaver somniferum HOM05D016868 ORTHO05D016554 6.8e-21 104.4 119 44.5
PSO381G0005 Papaver somniferum HOM05D016868 ORTHO05D016554 1.7e-19 99.8 120 44.2
Os06g0661766 Oryza sativa ssp. japonica HOM05D046625 ORTHO05D016554 1.1e-13 80.5 92 46.7
Zm00001eb389630 Zea mays HOM05D046625 ORTHO05D016554 1.3e-11 73.6 85 47.1
AL3G11920 Arabidopsis lyrata HOM05D001188 ORTHO05D001032 1.6e-09 66.6 78 44.9
Nn8g40847 Nelumbo nucifera HOM05D016868 ORTHO05D016554 2.7e-09 65.9 74 44.6
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 3.5e-09 65.5 135 36.3
Carub.0003s0167 Capsella rubella HOM05D001188 ORTHO05D001032 4.6e-09 65.1 82 45.1
AT3G02555 Arabidopsis thaliana HOM05D001188 ORTHO05D001032 1.0e-08 63.9 78 44.9
Sed0005897 Sechium edule HOM05D001188 ORTHO05D001032 1.0e-08 63.9 103 35.0
SalBow8G0834 Salvia bowleyana HOM05D001188 ORTHO05D001032 1.3e-08 63.5 121 34.7
Actinidia36318 Actinidia chinensis HOM05D001188 ORTHO05D001032 3.0e-08 62.4 105 41.0
PGR083G2588 Punica granatum HOM05D001188 ORTHO05D001032 3.0e-08 62.4 91 39.6
C09p75790 Brassica napus HOM05D001188 ORTHO05D001032 3.9e-08 62.0 98 39.8
BolC5t35074H Brassica oleracea HOM05D001188 ORTHO05D001032 3.9e-08 62.0 98 39.8
CARHR076560 Cardamine hirsuta HOM05D001188 ORTHO05D001032 3.9e-08 62.0 92 40.2
CsaV3_3G020680 Cucumis sativus L. HOM05D001188 ORTHO05D001032 3.9e-08 62.0 93 39.8
MELO3C023804.2 Cucumis melo HOM05D001188 ORTHO05D001032 5.0e-08 61.6 93 39.8
A05p45270 Brassica napus HOM05D001188 ORTHO05D001032 6.6e-08 61.2 98 39.8
BraA05t23133Z Brassica rapa HOM05D001188 ORTHO05D001032 6.6e-08 61.2 108 36.1
unitig_22.g5573 Utricularia gibba HOM05D001188 ORTHO05D001032 6.6e-08 61.2 74 43.2
ClCG05G011830 Citrullus lanatus HOM05D001188 ORTHO05D001032 1.1e-07 60.5 88 39.8
COL.COLO4_09325 Corchorus olitorius HOM05D001188 ORTHO05D001032 1.1e-07 60.5 108 38.0
CAN.G610.80 Capsicum annuum HOM05D001188 ORTHO05D001032 1.9e-07 59.7 100 35.0
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 1.9e-07 59.7 115 31.3
unitig_8.g3440 Utricularia gibba HOM05D001188 ORTHO05D001032 2.5e-07 59.3 129 31.8
Atru.chr9.860 Acer truncatum HOM05D001188 ORTHO05D001032 3.3e-07 58.9 113 33.6
C03p08790 Brassica napus HOM05D001188 ORTHO05D001032 3.3e-07 58.9 89 38.2
Gohir.A12G054100 Gossypium hirsutum HOM05D001188 ORTHO05D001032 3.3e-07 58.9 94 36.2
Sc04g0003510 Simmondsia chinensis HOM05D001188 ORTHO05D001032 3.3e-07 58.9 74 41.9
TAR374G1010 Trochodendron aralioides HOM05D001188 ORTHO05D001032 3.3e-07 58.9 91 40.7
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 4.3e-07 58.5 95 37.9
PSO063G5826 Papaver somniferum HOM05D016868 ORTHO05D016554 4.3e-07 58.5 69 42.0
A02p03390 Brassica napus HOM05D001188 ORTHO05D001032 5.6e-07 58.2 95 36.8
BolC2t06738H Brassica oleracea HOM05D001188 ORTHO05D001032 5.6e-07 58.2 95 36.8
Gohir.D11G169800 Gossypium hirsutum HOM05D001188 ORTHO05D001032 5.6e-07 58.2 114 30.7
unitig_10.g29676 Utricularia gibba HOM05D001188 ORTHO05D001032 5.6e-07 58.2 74 48.6
unitig_8.g3981 Utricularia gibba HOM05D001188 ORTHO05D001032 5.6e-07 58.2 74 48.6
Oeu056570.1 Olea europaea HOM05D001188 ORTHO05D001032 7.3e-07 57.8 105 32.4
PSO478G0398 Papaver somniferum HOM05D001188 ORTHO05D001032 7.3e-07 57.8 94 36.2
Ah.03g137620 Amaranthus hybridus HOM05D001188 ORTHO05D001032 9.5e-07 57.4 101 37.6
Duzib138G1765 Durio zibethinus HOM05D001188 ORTHO05D001032 9.5e-07 57.4 108 33.3
Thecc.04G134100 Theobroma cacao HOM05D001188 ORTHO05D001032 9.5e-07 57.4 108 36.1
BcaB01g05003 Brassica carinata HOM05D001188 ORTHO05D001032 1.2e-06 57.0 89 37.1
BolC3t13375H Brassica oleracea HOM05D001188 ORTHO05D001032 1.2e-06 57.0 127 33.9
AUR62002861 Chenopodium quinoa HOM05D001188 ORTHO05D001032 1.2e-06 57.0 88 38.6
Gorai.007G181500 Gossypium raimondii HOM05D001188 ORTHO05D001032 1.2e-06 57.0 114 30.7
PSO017G0291 Papaver somniferum HOM05D001188 ORTHO05D001032 1.2e-06 57.0 94 36.2
Sed0009614 Sechium edule HOM05D001188 ORTHO05D001032 1.2e-06 57.0 81 39.5
Hund25061 Selenicereus undatus HOM05D001188 ORTHO05D001032 1.2e-06 57.0 95 36.8
TAR622G0754 Trochodendron aralioides HOM05D001188 ORTHO05D001032 1.2e-06 57.0 90 38.9
Aa31LG11G13500 Aethionema arabicum HOM05D001188 ORTHO05D001032 1.6e-06 56.6 100 37.0
BcaB01g05005 Brassica carinata HOM05D001188 ORTHO05D001032 1.6e-06 56.6 93 36.6
BcaC05g30368 Brassica carinata HOM05D001188 ORTHO05D001032 1.6e-06 56.6 85 41.2
Ciclev10012908m.g Citrus clementina HOM05D001188 ORTHO05D001032 1.6e-06 56.6 88 39.8
Ciclev10022616m.g Citrus clementina HOM05D001188 ORTHO05D001032 1.6e-06 56.6 87 34.5
Duzib133G1375 Durio zibethinus HOM05D001188 ORTHO05D001032 1.6e-06 56.6 109 34.9
Sp3g01590 Schrenkiella parvula HOM05D001188 ORTHO05D001032 1.6e-06 56.6 86 39.5
Sp6g28030 Schrenkiella parvula HOM05D001188 ORTHO05D001032 1.6e-06 56.6 130 32.3
Atru.chr1.1702 Acer truncatum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 117 32.5
Aqoxy3G03954 Aquilegia oxysepala HOM05D001188 ORTHO05D001032 2.1e-06 56.2 114 30.7
AL6G26990 Arabidopsis lyrata HOM05D001188 ORTHO05D001032 2.1e-06 56.2 92 35.9
AT5G16110 Arabidopsis thaliana HOM05D001188 ORTHO05D001032 2.1e-06 56.2 92 35.9
BNapus_Darmor_BZH_scaffold_122p00050 Brassica napus HOM05D001188 ORTHO05D001032 2.1e-06 56.2 85 41.2
BNapus_Darmor_BZH_scaffold_99p00070 Brassica napus HOM05D001188 ORTHO05D001032 2.1e-06 56.2 85 41.2
BraSC246t45835Z Brassica rapa HOM05D001188 ORTHO05D001032 2.1e-06 56.2 85 41.2
Carub.0055s0003 Capsella rubella HOM05D001188 ORTHO05D001032 2.1e-06 56.2 97 37.1
Cpa.g.sc282.12 Carica papaya HOM05D001188 ORTHO05D001032 2.1e-06 56.2 113 37.2
Dinv34823 Davidia involucrata HOM05D001188 ORTHO05D001032 2.1e-06 56.2 88 39.8
Thhalv10014345m.g Eutrema salsugineum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 96 35.4
Gohir.A04G098400 Gossypium hirsutum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 98 35.7
Gohir.D04G138000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 98 35.7
Gohir.D12G052700 Gossypium hirsutum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 94 35.1
Gorai.012G122900 Gossypium raimondii HOM05D001188 ORTHO05D001032 2.1e-06 56.2 98 35.7
HanXRQChr15g0476301 Helianthus annuus HOM05D001188 ORTHO05D001032 2.1e-06 56.2 121 31.4
Nitab4.5_0000208g0250 Nicotiana tabacum HOM05D001188 ORTHO05D001032 2.1e-06 56.2 86 39.5
VMungo0720G1107 Vigna mungo HOM05D001188 ORTHO05D001032 2.1e-06 56.2 98 34.7
MSTRG.13534 Avicennia marina HOM05D001188 ORTHO05D001032 2.8e-06 55.8 116 31.9
Carub.0006s1430 Capsella rubella HOM05D001188 ORTHO05D001032 2.8e-06 55.8 97 37.1
DCAR_011355 Daucus carota HOM05D001188 ORTHO05D001032 2.8e-06 55.8 74 40.5
Dinv31636 Davidia involucrata HOM05D001188 ORTHO05D001032 2.8e-06 55.8 108 35.2
Eucgr.F02493 Eucalyptus grandis HOM05D001188 ORTHO05D001032 2.8e-06 55.8 115 33.0
FvH4_5g12120 Fragaria vesca HOM05D001188 ORTHO05D001032 2.8e-06 55.8 87 39.1
FAN08G0058 Fragaria x ananassa HOM05D001188 ORTHO05D001032 2.8e-06 55.8 87 39.1
FAN13G2404 Fragaria x ananassa HOM05D001188 ORTHO05D001032 2.8e-06 55.8 87 39.1
Gohir.A11G163400 Gossypium hirsutum HOM05D001188 ORTHO05D001032 2.8e-06 55.8 100 33.0
Gorai.006G194700 Gossypium raimondii HOM05D001188 ORTHO05D001032 2.8e-06 55.8 79 36.7
Gorai.008G055900 Gossypium raimondii HOM05D001188 ORTHO05D001032 2.8e-06 55.8 94 35.1
HanXRQChr08g0213871 Helianthus annuus HOM05D001188 ORTHO05D001032 2.8e-06 55.8 89 38.2
Lj9A426G57 Lonicera japonica HOM05D001188 ORTHO05D001032 2.8e-06 55.8 85 40.0
Oeu039289.1 Olea europaea HOM05D001188 ORTHO05D001032 2.8e-06 55.8 104 32.7
QL10p025341 Quercus lobata HOM05D001188 ORTHO05D001032 2.8e-06 55.8 102 35.3
SalBow8G3759 Salvia bowleyana HOM05D001188 ORTHO05D001032 2.8e-06 55.8 124 31.5
GSVIVG01011892001 Vitis vinifera HOM05D001188 ORTHO05D001032 2.8e-06 55.8 95 38.9
BcaC03g18468 Brassica carinata HOM05D001188 ORTHO05D001032 3.6e-06 55.5 95 35.8
BcaNung05406 Brassica carinata HOM05D001188 ORTHO05D001032 3.6e-06 55.5 85 38.8
A03p07560 Brassica napus HOM05D001188 ORTHO05D001032 3.6e-06 55.5 93 35.5
BolC1t05896H Brassica oleracea HOM05D001188 ORTHO05D001032 3.6e-06 55.5 85 38.8
BraA03t10084Z Brassica rapa HOM05D001188 ORTHO05D001032 3.6e-06 55.5 93 35.5
Duzib248G1403 Durio zibethinus HOM05D001188 ORTHO05D001032 3.6e-06 55.5 97 37.1
FAN18G0048 Fragaria x ananassa HOM05D001188 ORTHO05D001032 3.6e-06 55.5 87 39.1
FAN18G3829 Fragaria x ananassa HOM05D001188 ORTHO05D001032 3.6e-06 55.5 87 39.1
Gohir.D07G181000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 3.6e-06 55.5 98 35.7
Gorai.001G201900 Gossypium raimondii HOM05D001188 ORTHO05D001032 3.6e-06 55.5 98 35.7
Sopen04g002280 Solanum pennellii HOM05D001188 ORTHO05D001032 3.6e-06 55.5 89 36.0
BcaC09g47709 Brassica carinata HOM05D001188 ORTHO05D001032 4.7e-06 55.1 82 39.0
BcaNung02222 Brassica carinata HOM05D001188 ORTHO05D001032 4.7e-06 55.1 105 33.3
C02p08150 Brassica napus HOM05D001188 ORTHO05D001032 4.7e-06 55.1 95 35.8
AUR62008997 Chenopodium quinoa HOM05D001188 ORTHO05D001032 4.7e-06 55.1 107 33.6
Cc11_g10110 Coffea canephora HOM05D001188 ORTHO05D001032 4.7e-06 55.1 94 36.2
Prupe.3G157300 Prunus persica HOM05D001188 ORTHO05D001032 4.7e-06 55.1 88 37.5
Solyc04g007220.4 Solanum lycopersicum HOM05D001188 ORTHO05D001032 4.7e-06 55.1 89 33.7
PGSC0003DMG401007748 Solanum tuberosum HOM05D001188 ORTHO05D001032 4.7e-06 55.1 89 37.1
PGSC0003DMG401019589 Solanum tuberosum HOM05D001188 ORTHO05D001032 4.7e-06 55.1 96 38.5
CANSAT01G2779 Cannabis sativa HOM05D001188 ORTHO05D001032 6.2e-06 54.7 91 36.3
CsaV3_5G023120 Cucumis sativus L. HOM05D001188 ORTHO05D001032 6.2e-06 54.7 102 35.3
Gohir.A09G177300 Gossypium hirsutum HOM05D001188 ORTHO05D001032 6.2e-06 54.7 79 36.7
Hma1.2p1_0653F.1_g196290 Hydrangea macrophylla HOM05D001188 ORTHO05D001032 6.2e-06 54.7 107 35.5
Peaxi162Scf01346g00003 Petunia axillaris HOM05D001188 ORTHO05D001032 6.2e-06 54.7 99 32.3
Rhsim10G0067000 Rhododendron simsii HOM05D001188 ORTHO05D001032 6.2e-06 54.7 98 39.8
Thecc.02G230100 Theobroma cacao HOM05D001188 ORTHO05D001032 6.2e-06 54.7 140 30.0
unitig_22.g6869 Utricularia gibba HOM05D001188 ORTHO05D001032 6.2e-06 54.7 135 30.4
Aqoxy3G00294 Aquilegia oxysepala HOM05D001188 ORTHO05D001032 8.1e-06 54.3 133 27.8
A03p33020 Brassica napus HOM05D001188 ORTHO05D001032 8.1e-06 54.3 97 35.1
Duzib084G1405 Durio zibethinus HOM05D001188 ORTHO05D001032 8.1e-06 54.3 91 35.2
Migut.E00344 Erythranthe guttata HOM05D001188 ORTHO05D001032 8.1e-06 54.3 96 33.3
Gohir.A07G173283 Gossypium hirsutum HOM05D001188 ORTHO05D001032 8.1e-06 54.3 98 34.7
Nitab4.5_0006638g0010 Nicotiana tabacum HOM05D001188 ORTHO05D001032 8.1e-06 54.3 98 35.7
Nitab4.5_0011688g0010 Nicotiana tabacum HOM05D001188 ORTHO05D001032 8.1e-06 54.3 72 44.4
Sabra04G0080200 Salix brachista HOM05D001188 ORTHO05D001032 8.1e-06 54.3 91 37.4
Sed0026905 Sechium edule HOM05D001188 ORTHO05D001032 8.1e-06 54.3 95 35.8
Hund20797 Selenicereus undatus HOM05D001188 ORTHO05D001032 8.1e-06 54.3 94 34.0
vmacro10559 Vaccinium macrocarpon HOM05D001188 ORTHO05D001032 8.1e-06 54.3 95 34.7


User provided reference genes

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