Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 6.8e-102 374.0 191 100.0
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 3.8e-76 288.5 188 75.0
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 4.9e-76 288.1 192 75.0
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 6.0e-74 281.2 170 80.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.5e-69 266.5 177 74.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.4e-69 265.4 176 73.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.7e-68 263.1 179 70.4
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.1e-67 260.4 178 69.7
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.1e-66 256.1 169 71.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.1e-66 256.1 169 71.0
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.7e-66 255.8 169 71.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 2.7e-66 255.8 168 72.0
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 7.9e-66 254.2 169 70.4
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 7.9e-66 254.2 179 70.9
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.0e-65 253.8 165 72.7
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.0e-65 253.8 178 69.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.3e-65 253.4 169 72.8
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 2.3e-65 252.7 185 67.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.0e-65 252.3 182 68.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 3.9e-65 251.9 178 68.0
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 6.7e-65 251.1 183 66.7
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 6.7e-65 251.1 184 69.0
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 6.7e-65 251.1 173 71.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 8.7e-65 250.8 181 66.9
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.1e-64 250.4 177 70.1
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.1e-64 250.4 179 67.6
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.5e-64 250.0 182 67.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.9e-64 249.6 169 69.8
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.9e-64 249.6 179 68.7
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.9e-64 249.6 183 67.8
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.5e-64 249.2 179 68.7
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.3e-64 248.8 183 66.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 4.3e-64 248.4 181 66.3
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 7.4e-64 247.7 186 65.6
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 9.6e-64 247.3 181 68.0
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 9.6e-64 247.3 181 68.0
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 9.6e-64 247.3 183 66.1
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.6e-63 246.5 183 65.6
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.6e-63 246.5 183 66.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.6e-63 246.5 183 66.1
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.1e-63 246.1 182 66.5
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 2.1e-63 246.1 169 70.4
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 2.8e-63 245.7 179 68.7
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.8e-63 245.7 203 63.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.8e-63 245.7 169 70.4
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.6e-63 245.4 193 64.8
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.8e-63 245.0 179 67.6
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 6.2e-63 244.6 179 66.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 6.2e-63 244.6 194 64.4
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.4e-62 243.4 169 66.9
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 9.0e-62 240.7 165 70.3
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 9.0e-62 240.7 179 67.6
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 2.0e-61 239.6 180 62.8
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.6e-61 239.2 186 65.6
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 4.5e-61 238.4 191 63.4
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.8e-61 238.0 185 65.9
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 9.9e-61 237.3 163 69.3
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 4.9e-60 235.0 179 64.2
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 8.4e-60 234.2 183 65.6
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.2e-59 232.3 158 72.2
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 3.2e-59 232.3 198 59.1
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 9.3e-59 230.7 158 69.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-58 230.3 160 70.0
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-58 230.3 182 66.5
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.2e-58 230.3 154 70.8
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.0e-57 227.3 181 65.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 8.7e-57 224.2 186 63.4
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.9e-56 223.0 165 65.5
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.9e-56 223.0 166 65.7
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.5e-56 222.6 164 67.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 8.1e-55 217.6 158 66.5
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.4e-54 216.9 188 58.0
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.8e-54 216.5 169 65.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 6.9e-54 214.5 175 61.1
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 7.6e-53 211.1 183 57.4
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 3.8e-52 208.8 178 60.7
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.1e-51 207.2 152 67.8
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.4e-51 206.8 163 62.6
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.6e-50 203.4 138 68.1
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 6.0e-50 201.4 181 56.9
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.5e-48 196.8 161 62.7
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.9e-48 196.4 258 43.0
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 4.3e-48 195.3 161 56.5
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.8e-46 189.9 156 59.6
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 9.0e-46 187.6 165 58.8
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 9.0e-46 187.6 158 57.6
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.7e-44 183.3 158 56.3
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 8.5e-44 181.0 125 69.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 6.7e-41 171.4 133 64.7
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 8.7e-41 171.0 119 68.9
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 9.7e-40 167.5 132 59.8
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 4.8e-39 165.2 120 68.3
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 8.2e-39 164.5 182 47.8
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 3.4e-37 159.1 116 63.8
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.0e-36 157.5 114 65.8
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.3e-36 157.1 107 67.3
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.9e-36 156.0 171 50.9
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.5e-35 152.9 97 74.2
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.1e-34 149.8 126 58.7
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 2.7e-34 149.4 117 61.5
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 2.7e-34 149.4 162 50.0
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.7e-34 149.4 158 50.6
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 5.1e-33 145.2 99 72.7
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 6.7e-33 144.8 88 80.7
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.3e-32 142.5 107 66.4
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.8e-30 136.7 97 67.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.1e-30 135.6 137 55.5
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 9.4e-27 124.4 120 57.5
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.6e-26 122.5 133 53.4
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 6.1e-26 121.7 75 77.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.3e-23 114.0 140 41.4
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 3.5e-21 105.9 100 57.0
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.5e-19 99.8 155 32.9
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.0e-17 92.4 60 68.3
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.4e-16 89.0 49 83.7
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 9.7e-16 87.8 101 47.5
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.3e-12 77.4 51 72.5
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.8e-06 57.0 36 72.2


User provided reference genes

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