Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 4.4e-80 301.2 150 100.0
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.3e-31 140.2 89 75.3
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 1.3e-15 87.0 66 59.1
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 8.5e-15 84.3 65 52.3
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 8.5e-15 84.3 92 42.4
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 8.5e-15 84.3 92 41.3
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 7.2e-14 81.3 64 51.6
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.1e-13 79.7 92 40.2
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 2.7e-13 79.3 62 54.8
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 4.6e-13 78.6 64 51.6
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 4.6e-13 78.6 67 46.3
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 6.1e-13 78.2 88 42.0
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 1.4e-12 77.0 66 47.0
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 3.0e-12 75.9 88 43.2
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 3.0e-12 75.9 90 41.1
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 5.1e-12 75.1 66 47.0
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 5.1e-12 75.1 68 47.1
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 5.1e-12 75.1 61 52.5
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 6.7e-12 74.7 79 40.5
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 6.7e-12 74.7 65 52.3
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 1.5e-11 73.6 71 46.5
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.5e-11 73.6 73 39.7
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 1.5e-11 73.6 64 50.0
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 3.3e-11 72.4 66 45.5
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 4.3e-11 72.0 66 45.5
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.3e-10 70.5 63 54.0
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.7e-10 70.1 68 44.1
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.7e-10 70.1 65 43.1
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 4.8e-10 68.6 66 42.4
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 4.8e-10 68.6 92 35.9
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 8.2e-10 67.8 86 36.0
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 8.2e-10 67.8 79 38.0
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 1.8e-09 66.6 61 44.3
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 2.4e-09 66.2 66 40.9
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 2.4e-09 66.2 61 45.9
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 2.4e-09 66.2 82 34.1
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 5.3e-09 65.1 66 42.4
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 5.3e-09 65.1 66 42.4
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 6.9e-09 64.7 65 47.7
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 9.1e-09 64.3 75 33.3
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.2e-08 63.9 102 35.3
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.5e-08 63.5 107 31.8
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 2.6e-08 62.8 62 41.9
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 2.6e-08 62.8 54 46.3
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 4.5e-08 62.0 73 34.2
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 5.9e-08 61.6 67 37.3
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.3e-07 60.5 75 32.0
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 2.2e-07 59.7 66 37.9
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 2.2e-07 59.7 73 37.0
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 3.8e-07 58.9 73 32.9
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 5.0e-07 58.5 76 36.8
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 1.1e-06 57.4 76 35.5
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.1e-06 57.4 88 37.5
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.1e-06 57.4 88 37.5
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 1.1e-06 57.4 88 37.5
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 1.4e-06 57.0 80 36.2
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.9e-06 56.6 136 30.9
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 2.5e-06 56.2 66 39.4
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 2.5e-06 56.2 91 38.5
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 9.4e-06 54.3 61 39.3
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 9.4e-06 54.3 73 32.9


User provided reference genes

Program Settings