Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.1e-160 568.9 277 100.0
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.1e-140 503.4 277 88.1
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 1.6e-88 330.1 267 59.2
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.0e-82 310.8 264 56.8
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 3.9e-74 282.3 267 51.3
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.5e-73 279.6 270 51.5
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 1.8e-71 273.5 256 52.3
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 3.1e-71 272.7 265 50.6
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 9.0e-71 271.2 256 53.9
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 3.4e-70 269.2 260 50.4
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 3.4e-70 269.2 258 53.5
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 4.5e-70 268.9 258 48.8
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 1.3e-69 267.3 266 50.4
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 2.2e-69 266.5 257 53.3
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 2.2e-69 266.5 257 53.3
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 2.2e-69 266.5 267 49.8
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 3.2e-68 262.7 261 48.3
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 5.5e-68 261.9 256 50.4
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 7.1e-68 261.5 258 49.2
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 2.1e-67 260.0 260 47.3
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 6.0e-67 258.5 259 48.3
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 1.0e-66 257.7 262 48.5
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 1.3e-66 257.3 258 49.2
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.3e-66 257.3 263 49.8
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 3.0e-66 256.1 263 47.9
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 3.9e-66 255.8 236 52.5
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 3.9e-66 255.8 255 47.5
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 5.1e-66 255.4 260 46.9
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 5.1e-66 255.4 304 44.7
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 8.7e-66 254.6 263 51.7
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.1e-65 254.2 263 47.9
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 1.5e-65 253.8 260 47.3
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 2.1e-64 250.0 264 47.7
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 2.8e-64 249.6 253 48.2
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 3.7e-64 249.2 257 48.6
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 6.3e-64 248.4 258 48.1
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 8.2e-64 248.1 256 50.8
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 8.2e-64 248.1 254 49.2
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 1.8e-63 246.9 259 47.1
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 1.8e-63 246.9 267 46.4
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 5.3e-63 245.4 258 47.7
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 9.0e-63 244.6 255 46.7
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.5e-62 243.8 262 50.0
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 3.4e-62 242.7 258 46.5
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 4.5e-62 242.3 255 46.3
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 7.6e-62 241.5 264 45.5
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.3e-61 240.7 261 44.4
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 2.2e-61 240.0 257 44.7
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 5.0e-61 238.8 317 41.6
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 6.5e-61 238.4 256 45.7
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 8.5e-61 238.0 267 45.7
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.9e-60 236.9 263 45.6
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 2.5e-60 236.5 258 46.9
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 5.5e-60 235.3 254 47.2
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 9.3e-60 234.6 284 43.3
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 1.2e-59 234.2 253 47.4
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 2.7e-59 233.0 252 45.6
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 4.6e-59 232.3 255 45.5
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 4.6e-59 232.3 255 45.5
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 6.1e-59 231.9 260 46.5
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.3e-58 230.7 255 45.1
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 3.0e-58 229.6 254 44.9
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 5.1e-58 228.8 260 44.2
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 5.1e-58 228.8 262 42.4
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 5.1e-58 228.8 298 42.6
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 6.7e-58 228.4 254 46.9
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 8.7e-58 228.0 254 44.9
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 1.9e-57 226.9 241 48.5
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.7e-57 225.3 257 45.1
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 7.4e-57 224.9 229 46.3
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 2.2e-56 223.4 229 45.9
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 1.8e-55 220.3 229 48.5
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.4e-55 219.9 226 48.7
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 2.4e-55 219.9 301 40.9
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 5.3e-55 218.8 259 44.4
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 3.4e-54 216.1 214 48.1
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 4.5e-54 215.7 258 43.4
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 1.0e-53 214.5 261 40.2
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 5.0e-53 212.2 248 43.5
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 1.1e-52 211.1 226 47.8
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.4e-52 210.7 268 42.2
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 4.6e-51 205.7 264 42.8
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 7.9e-51 204.9 239 43.1
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.0e-50 204.5 258 44.6
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.8e-50 203.8 258 42.2
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 5.1e-50 202.2 263 42.2
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 2.0e-49 200.3 259 42.5
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 2.6e-49 199.9 246 44.3
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 4.3e-49 199.1 265 45.3
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 3.7e-48 196.1 256 41.8
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 3.1e-47 193.0 258 39.1
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 9.1e-47 191.4 244 45.1
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 3.4e-46 189.5 254 38.2
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.0e-45 188.0 218 41.3
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 8.5e-45 184.9 224 42.4
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.2e-44 183.0 206 45.6
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 4.7e-43 179.1 262 41.6
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 6.1e-43 178.7 206 44.7
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 1.4e-42 177.6 261 42.1
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.4e-39 167.5 267 41.6
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.2e-38 164.5 271 39.1
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.2e-38 164.5 259 39.8
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 1.6e-38 164.1 172 49.4
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 4.5e-38 162.5 273 39.2
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 7.7e-38 161.8 234 43.6
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 1.0e-37 161.4 246 40.7
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 2.2e-37 160.2 249 41.0
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 2.9e-37 159.8 249 40.6
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 3.2e-36 156.4 213 44.1
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 5.5e-36 155.6 253 39.5
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 7.2e-36 155.2 273 37.7
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 9.4e-36 154.8 253 39.5
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.4e-34 151.0 245 39.2
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 5.2e-34 149.1 138 47.1
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 1.5e-33 147.5 229 37.6
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-31 141.4 256 37.1
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 3.5e-30 136.3 163 46.0
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.9e-28 130.6 259 29.0
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 2.5e-28 130.2 255 33.3
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 4.2e-28 129.4 163 44.8
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 1.5e-25 120.9 155 40.6
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 7.5e-25 118.6 120 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 9.8e-25 118.2 261 29.5
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.3e-24 117.9 106 51.9
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 3.5e-22 109.8 104 50.0
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 6.1e-19 99.0 147 40.1
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 5.2e-18 95.9 118 40.7
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 1.2e-14 84.7 135 38.5
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-14 83.6 96 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 8.6e-13 78.6 241 24.5
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 1.6e-11 74.3 89 42.7
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 6.8e-10 68.9 59 57.6
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 1.6e-06 57.8 60 48.3


User provided reference genes

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