Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.5e-127 458.8 226 100.0
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 1.3e-54 217.2 226 53.5
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 2.1e-54 216.5 220 54.1
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 4.8e-54 215.3 247 49.4
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 1.4e-53 213.8 223 53.4
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.8e-53 213.4 223 50.2
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.4e-53 213.0 222 52.7
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 5.3e-53 211.8 234 53.0
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.5e-52 210.3 242 48.8
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.6e-52 209.5 232 52.6
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 3.4e-52 209.1 228 54.4
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 5.8e-52 208.4 235 50.2
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 7.6e-52 208.0 235 48.9
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 2.9e-51 206.1 225 52.0
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 2.9e-51 206.1 247 49.4
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 8.4e-51 204.5 217 51.6
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.1e-50 204.1 215 52.6
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.9e-50 203.4 227 49.8
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 3.2e-50 202.6 217 53.0
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 3.2e-50 202.6 227 50.2
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 4.2e-50 202.2 222 51.4
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 7.2e-50 201.4 232 47.8
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 9.3e-50 201.1 170 61.8
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.2e-49 200.7 216 50.9
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.2e-49 200.7 216 50.9
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.2e-49 200.7 216 50.9
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.2e-49 200.7 234 49.6
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 1.2e-49 200.7 190 56.8
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 2.1e-49 199.9 238 47.9
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 2.1e-49 199.9 280 45.0
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 2.1e-49 199.9 218 51.4
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.7e-49 199.5 231 48.1
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 2.7e-49 199.5 222 49.5
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 3.5e-49 199.1 212 51.9
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 3.5e-49 199.1 250 46.8
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 6.1e-49 198.4 225 51.6
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 6.1e-49 198.4 230 50.4
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 7.9e-49 198.0 221 52.0
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 7.9e-49 198.0 229 51.5
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 1.0e-48 197.6 162 59.9
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 3.0e-48 196.1 216 50.0
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 5.1e-48 195.3 217 46.5
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 8.7e-48 194.5 239 49.8
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 3.3e-47 192.6 240 47.1
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 5.7e-47 191.8 225 50.2
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 9.7e-47 191.0 213 46.5
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 1.3e-46 190.7 130 65.4
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 2.2e-46 189.9 209 52.6
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 8.2e-46 188.0 186 54.8
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.4e-45 187.2 228 46.5
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.8e-45 186.8 237 46.8
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 3.1e-45 186.0 239 46.4
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 3.1e-45 186.0 171 56.1
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 5.3e-45 185.3 230 50.0
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 5.3e-45 185.3 216 49.1
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 5.9e-44 181.8 229 48.0
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 7.7e-44 181.4 213 46.5
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 7.7e-44 181.4 216 46.8
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.7e-43 180.3 232 48.7
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.2e-43 179.9 209 46.9
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 2.9e-43 179.5 149 60.4
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 3.8e-43 179.1 136 61.8
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 3.8e-43 179.1 210 49.0
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 6.5e-43 178.3 228 45.2
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 8.5e-43 177.9 206 49.5
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 1.1e-42 177.6 211 46.0
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 1.9e-42 176.8 140 62.9
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 3.2e-42 176.0 214 48.6
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.5e-42 175.3 220 46.8
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 7.2e-42 174.9 233 42.9
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.4e-42 174.5 219 48.4
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-41 174.1 232 45.7
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 2.1e-41 173.3 219 46.6
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 4.6e-41 172.2 208 47.6
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.0e-40 171.0 237 44.7
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 5.1e-40 168.7 231 45.5
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.8e-40 167.9 148 54.7
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 1.4e-37 160.6 122 61.5
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 6.9e-37 158.3 131 60.3
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 2.6e-36 156.4 210 41.4
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.3e-35 154.1 228 43.4
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 3.2e-34 149.4 181 49.2
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 2.7e-33 146.4 231 37.7
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.1e-31 141.0 199 41.2
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 2.6e-31 139.8 208 42.8
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.3e-31 139.4 114 57.9
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 4.4e-31 139.0 119 59.7
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 5.3e-29 132.1 235 35.3
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 1.6e-28 130.6 239 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 5.7e-23 112.1 128 46.1
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 9.7e-23 111.3 121 51.2
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.8e-22 109.8 144 47.2
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.4e-21 107.5 116 48.3
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 2.4e-21 106.7 239 33.9
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 6.5e-11 72.0 166 33.7
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.2e-09 67.8 54 61.1
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 4.0e-08 62.8 30 86.7
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 5.2e-08 62.4 55 52.7
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 1.5e-07 60.8 54 57.4
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.3e-06 57.8 142 31.0


User provided reference genes

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