Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 5.0e-139 497.7 234 100.0
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.4e-110 401.0 235 78.3
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 1.9e-109 399.4 235 77.9
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.6e-108 396.4 235 77.4
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 1.7e-107 392.9 232 77.2
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 2.5e-106 389.0 232 76.3
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 5.6e-106 387.9 233 76.0
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 3.1e-104 382.1 232 74.6
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 1.5e-103 379.8 234 72.2
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.5e-103 379.8 231 72.3
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 2.0e-103 379.4 232 74.1
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 3.4e-103 378.6 234 75.2
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 4.4e-103 378.3 230 75.7
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 2.2e-102 375.9 224 77.7
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 6.4e-102 374.4 229 73.4
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 8.3e-102 374.0 233 73.0
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.1e-101 373.6 236 72.5
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 1.4e-101 373.2 233 73.0
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 2.4e-101 372.5 230 75.2
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 2.4e-101 372.5 229 72.9
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.4e-101 371.3 233 72.5
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.2e-101 370.5 233 73.0
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.2e-100 370.2 233 73.8
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.2e-100 370.2 225 75.1
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 2.7e-100 369.0 235 72.3
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 3.5e-100 368.6 235 69.8
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 6.0e-100 367.9 221 76.5
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 6.0e-100 367.9 221 76.5
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-99 365.9 233 72.1
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 3.9e-99 365.2 232 73.7
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.1e-98 363.6 222 75.2
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.9e-98 362.8 234 71.4
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.3e-98 362.1 231 71.9
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 4.3e-98 361.7 240 71.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 5.6e-98 361.3 224 72.8
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 8.1e-97 357.5 229 71.6
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 1.8e-96 356.3 287 59.9
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 4.0e-96 355.1 221 73.8
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 6.8e-96 354.4 236 70.8
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.2e-95 353.6 211 77.3
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 2.0e-95 352.8 235 67.2
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 3.4e-95 352.1 235 67.7
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.7e-94 349.7 248 66.9
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 3.8e-94 348.6 252 65.1
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 3.2e-93 345.5 225 69.8
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 7.1e-93 344.4 225 68.9
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.7e-91 339.7 230 66.1
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 6.2e-89 331.3 222 67.6
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 2.4e-88 329.3 223 63.2
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 2.6e-87 325.9 205 71.2
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 3.4e-87 325.5 230 66.5
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 7.6e-87 324.3 222 68.0
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 2.2e-86 322.8 225 65.3
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 5.4e-85 318.2 221 66.5
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 2.1e-84 316.2 237 63.3
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 6.0e-84 314.7 222 64.9
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.5e-82 310.1 223 62.3
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.4e-80 303.5 231 61.0
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 3.1e-80 302.4 223 59.6
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.5e-79 300.1 224 59.4
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 9.9e-79 297.4 222 60.4
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 4.9e-78 295.0 176 78.4
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 6.4e-78 294.7 236 60.6
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 4.6e-76 288.5 227 57.3
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 7.9e-76 287.7 229 60.7
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 2.3e-75 286.2 229 57.2
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 3.9e-75 285.4 224 57.1
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.1e-74 283.9 238 55.0
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 7.4e-74 281.2 238 54.6
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 5.3e-72 275.0 180 73.9
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 2.0e-71 273.1 217 56.2
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 4.9e-70 268.5 232 57.3
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 5.6e-66 255.0 170 67.6
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 2.1e-65 253.1 232 54.7
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.0e-63 246.5 156 76.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 2.2e-62 243.0 220 55.0
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.6e-57 226.9 143 71.3
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 4.6e-52 208.8 132 70.5
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.1e-50 204.1 123 74.8
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 4.3e-50 202.2 135 70.4
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.4e-48 197.2 199 50.3
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 9.1e-48 194.5 109 81.7
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 7.2e-45 184.9 193 46.1
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 5.1e-43 178.7 131 58.0
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.4e-40 170.6 102 76.5
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 4.1e-32 142.5 122 55.7
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 7.7e-23 111.7 209 37.3
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 1.0e-22 111.3 69 62.3
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 1.3e-22 110.9 86 52.3
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.6e-20 102.8 106 54.7
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 3.6e-20 102.8 80 48.8
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 1.3e-17 94.4 86 52.3
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 7.0e-16 88.6 60 65.0
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 1.1e-08 64.7 59 47.5
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 2.0e-07 60.5 50 66.0


User provided reference genes

Program Settings