Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 3.1e-161 571.6 267 100.0
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.1e-125 452.6 260 80.4
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 8.8e-124 447.2 243 80.7
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 1.2e-123 446.8 243 80.7
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 9.1e-121 437.2 228 85.5
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 1.6e-120 436.4 235 81.3
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 7.7e-120 434.1 227 84.1
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 2.9e-119 432.2 234 82.1
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 8.6e-119 430.6 227 85.0
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 2.5e-118 429.1 245 80.4
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 2.5e-118 429.1 231 82.3
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 2.5e-118 429.1 231 82.7
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 2.5e-118 429.1 235 79.6
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 3.3e-118 428.7 248 77.4
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 3.3e-118 428.7 231 82.7
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.2e-118 428.3 227 82.4
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 4.2e-118 428.3 231 81.4
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 4.2e-118 428.3 227 81.9
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 4.2e-118 428.3 259 75.3
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 5.5e-118 427.9 237 80.6
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 9.5e-118 427.2 231 82.3
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 1.2e-117 426.8 235 79.1
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.2e-117 426.8 252 77.0
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 1.6e-117 426.4 234 80.8
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.6e-117 426.4 233 80.7
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.1e-117 426.0 231 81.4
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 2.1e-117 426.0 235 80.0
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 2.8e-117 425.6 236 79.7
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 2.8e-117 425.6 244 77.0
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 4.7e-117 424.9 226 82.3
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 4.7e-117 424.9 231 81.0
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 6.1e-117 424.5 231 81.8
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 6.1e-117 424.5 231 81.0
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 6.1e-117 424.5 238 76.5
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 8.0e-117 424.1 261 74.3
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 8.0e-117 424.1 237 79.7
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 8.0e-117 424.1 231 79.7
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 1.0e-116 423.7 249 75.1
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.0e-116 423.7 229 80.3
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.0e-116 423.7 231 81.0
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 1.0e-116 423.7 233 79.8
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 1.4e-116 423.3 233 80.3
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 1.8e-116 422.9 236 79.2
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 1.8e-116 422.9 240 79.2
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 4.0e-116 421.8 251 74.9
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 4.0e-116 421.8 231 81.4
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 5.2e-116 421.4 231 80.5
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.2e-116 421.4 230 80.0
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 5.2e-116 421.4 256 71.5
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 5.2e-116 421.4 234 80.3
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 6.8e-116 421.0 236 80.1
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 6.8e-116 421.0 234 80.3
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 6.8e-116 421.0 235 76.6
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 8.9e-116 420.6 253 75.5
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.2e-115 420.2 227 80.6
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 1.5e-115 419.9 244 76.2
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.0e-115 419.5 252 72.2
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 2.0e-115 419.5 240 75.4
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 2.0e-115 419.5 234 78.6
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 2.0e-115 419.5 243 76.5
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 2.0e-115 419.5 238 75.2
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 2.6e-115 419.1 226 81.9
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 3.4e-115 418.7 237 76.4
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 5.7e-115 417.9 233 79.0
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 5.7e-115 417.9 266 70.3
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 5.7e-115 417.9 239 77.4
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 7.5e-115 417.5 231 80.5
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 9.8e-115 417.2 237 77.6
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 9.8e-115 417.2 244 73.4
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 9.8e-115 417.2 240 75.4
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 1.3e-114 416.8 237 77.6
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.7e-114 416.4 231 77.9
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 2.2e-114 416.0 236 78.0
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 2.2e-114 416.0 250 74.0
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 2.9e-114 415.6 250 73.2
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.9e-114 415.6 233 78.5
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 3.7e-114 415.2 232 78.4
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 4.9e-114 414.8 237 77.2
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 4.9e-114 414.8 237 77.2
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 4.9e-114 414.8 238 76.9
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 4.9e-114 414.8 229 79.5
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 6.3e-114 414.5 242 75.2
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 6.3e-114 414.5 231 77.5
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 6.3e-114 414.5 238 76.5
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 6.3e-114 414.5 248 71.4
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 8.3e-114 414.1 245 75.5
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 8.3e-114 414.1 243 74.1
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 8.3e-114 414.1 242 75.6
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 1.1e-113 413.7 245 75.1
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 1.1e-113 413.7 245 75.5
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 1.4e-113 413.3 245 75.1
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 1.8e-113 412.9 227 80.2
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 3.2e-113 412.1 235 75.3
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 3.2e-113 412.1 251 74.5
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 4.1e-113 411.8 248 74.6
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 4.1e-113 411.8 235 77.9
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 5.4e-113 411.4 237 76.4
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 7.0e-113 411.0 226 79.2
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.2e-112 410.2 245 73.9
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 1.6e-112 409.8 232 75.4
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 1.6e-112 409.8 237 75.9
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 2.0e-112 409.5 245 74.7
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 2.0e-112 409.5 245 74.7
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 2.0e-112 409.5 235 77.0
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.7e-112 409.1 243 76.1
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 2.7e-112 409.1 232 78.9
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 4.6e-112 408.3 243 76.1
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 4.6e-112 408.3 240 74.2
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 5.9e-112 407.9 260 70.4
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 5.9e-112 407.9 254 71.7
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 7.8e-112 407.5 243 76.1
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.0e-111 407.1 229 77.7
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 1.0e-111 407.1 229 77.7
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.3e-111 406.8 236 75.4
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.7e-111 406.4 241 73.0
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 1.7e-111 406.4 235 75.7
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 2.9e-111 405.6 248 72.6
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 3.9e-111 405.2 253 71.1
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 3.9e-111 405.2 251 70.1
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.9e-111 405.2 234 75.6
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 5.0e-111 404.8 244 75.0
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 8.6e-111 404.1 225 78.7
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 8.6e-111 404.1 239 72.8
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 1.1e-110 403.7 239 74.5
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.1e-110 403.7 239 75.3
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 1.5e-110 403.3 227 76.7
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 1.5e-110 403.3 233 76.4
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 3.3e-110 402.1 225 77.8
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 7.3e-110 401.0 237 72.6
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 1.2e-109 400.2 236 74.2
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 1.6e-109 399.8 232 73.7
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 2.1e-109 399.4 234 75.6
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 2.8e-109 399.1 231 73.2
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 3.6e-109 398.7 231 74.9
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 4.0e-108 395.2 229 75.5
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 4.0e-108 395.2 229 75.5
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 6.8e-108 394.4 247 72.1
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 4.4e-107 391.7 235 71.9
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 1.1e-105 387.1 227 71.8
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.9e-105 386.3 244 70.5
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 5.4e-105 384.8 240 72.1
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 1.6e-101 373.2 223 74.9
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 1.2e-99 367.1 241 68.5
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 5.8e-99 364.8 241 67.2
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.9e-97 359.8 231 66.2
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 4.1e-97 358.6 236 66.9
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 4.6e-96 355.1 225 68.9
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 1.0e-95 354.0 209 78.0
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 1.6e-93 346.7 240 64.6
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 1.1e-92 344.0 232 64.7
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 2.5e-86 322.8 233 63.9
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.7e-79 300.1 227 62.1
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 3.9e-79 298.9 161 82.0
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 2.2e-74 283.1 152 79.6
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 1.1e-73 280.8 152 79.6
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 3.3e-62 242.7 194 59.3
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 1.6e-53 213.8 220 46.8
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.8e-53 213.0 229 47.2
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.0e-42 177.9 211 45.5
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 6.7e-39 165.2 89 83.1
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 1.7e-29 134.0 90 70.0
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 3.8e-26 122.9 116 52.6
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.8e-23 114.0 133 46.6
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 8.3e-13 78.6 57 57.9
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 4.2e-09 66.2 66 50.0


User provided reference genes

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