Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02483 Aquilegia oxysepala HOM05D003596 ORTHO05D031267 4.4e-61 237.7 110 100.0
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 4.9e-36 154.5 103 64.1
Aqoxy4G01737 Aquilegia oxysepala HOM05D003596 ORTHO05D031267 3.2e-35 151.8 104 72.1
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 4.1e-35 151.4 99 64.6
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 6.0e-34 147.5 103 59.2
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 9.5e-32 140.2 97 61.9
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 6.8e-30 134.0 103 54.4
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.7e-28 128.3 103 52.4
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 4.9e-28 127.9 103 53.4
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 2.7e-26 122.1 129 45.0
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 4.6e-26 121.3 97 56.7
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 1.0e-25 120.2 96 55.2
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 1.7e-25 119.4 97 54.6
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 2.3e-25 119.0 103 52.4
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 3.0e-25 118.6 97 56.7
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 3.0e-25 118.6 97 55.7
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 3.9e-25 118.2 103 49.5
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 3.9e-25 118.2 96 54.2
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 5.1e-25 117.9 100 50.0
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 6.6e-25 117.5 97 55.7
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 6.6e-25 117.5 97 51.5
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 8.6e-25 117.1 97 51.5
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 8.6e-25 117.1 98 52.0
QL02p000424 Quercus lobata HOM05D003596 ORTHO05D004256 8.6e-25 117.1 97 50.5
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 1.1e-24 116.7 103 50.5
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 1.5e-24 116.3 97 52.6
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 1.5e-24 116.3 96 53.1
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 1.5e-24 116.3 103 45.6
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 1.5e-24 116.3 103 45.6
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 1.5e-24 116.3 97 50.5
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 1.5e-24 116.3 97 52.6
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 1.9e-24 115.9 97 52.6
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 1.9e-24 115.9 108 48.1
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 1.9e-24 115.9 108 47.2
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 1.9e-24 115.9 108 47.2
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 2.5e-24 115.5 96 50.0
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 2.5e-24 115.5 96 53.1
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.5e-24 115.5 96 53.1
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 2.5e-24 115.5 98 52.0
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 3.3e-24 115.2 97 51.5
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 3.3e-24 115.2 96 53.1
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 3.3e-24 115.2 96 54.2
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 3.3e-24 115.2 97 51.5
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 4.3e-24 114.8 97 51.5
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 4.3e-24 114.8 103 50.5
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 4.3e-24 114.8 97 50.5
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 4.3e-24 114.8 96 52.1
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 4.3e-24 114.8 98 52.0
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 5.6e-24 114.4 103 49.5
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 50.5
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 51.5
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 51.5
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 50.5
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 52.6
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 5.6e-24 114.4 96 52.1
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 50.5
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 5.6e-24 114.4 97 50.5
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 7.3e-24 114.0 97 51.5
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 7.3e-24 114.0 103 49.5
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 7.3e-24 114.0 97 52.6
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 7.3e-24 114.0 98 51.0
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 7.3e-24 114.0 96 52.1
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 7.3e-24 114.0 97 50.5
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 7.3e-24 114.0 97 51.5
Dinv12458 Davidia involucrata HOM05D003596 ORTHO05D004256 9.5e-24 113.6 97 50.5
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 9.5e-24 113.6 97 50.5
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 9.5e-24 113.6 96 50.0
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 9.5e-24 113.6 97 52.6
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 9.5e-24 113.6 96 53.1
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 1.6e-23 112.8 98 50.0
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 1.6e-23 112.8 97 50.5
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 1.6e-23 112.8 97 50.5
BcaNung02153 Brassica carinata HOM05D003596 ORTHO05D004256 2.1e-23 112.5 102 50.0
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 2.1e-23 112.5 108 46.3
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 2.1e-23 112.5 108 46.3
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 2.1e-23 112.5 103 49.5
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 2.1e-23 112.5 108 47.2
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 2.1e-23 112.5 97 49.5
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 2.8e-23 112.1 97 49.5
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 2.8e-23 112.1 97 49.5
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 2.8e-23 112.1 108 46.3
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 2.8e-23 112.1 93 51.6
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.8e-23 112.1 96 52.1
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 2.8e-23 112.1 103 47.6
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 2.8e-23 112.1 97 50.5
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 2.8e-23 112.1 96 52.1
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 2.8e-23 112.1 96 52.1
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 2.8e-23 112.1 98 48.0
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 3.6e-23 111.7 103 44.7
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 3.6e-23 111.7 103 44.7
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 3.6e-23 111.7 105 46.7
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 3.6e-23 111.7 103 49.5
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 4.7e-23 111.3 108 46.3
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 4.7e-23 111.3 97 52.6
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 4.7e-23 111.3 97 49.5
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 4.7e-23 111.3 97 48.5
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 6.2e-23 110.9 108 45.4
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 6.2e-23 110.9 108 47.2
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 6.2e-23 110.9 97 49.5
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 6.2e-23 110.9 97 49.5
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 6.2e-23 110.9 93 51.6
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 6.2e-23 110.9 93 51.6
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 6.2e-23 110.9 108 46.3
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 6.2e-23 110.9 103 46.6
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 8.1e-23 110.5 108 46.3
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 8.1e-23 110.5 129 44.2
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 8.1e-23 110.5 93 51.6
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 8.1e-23 110.5 99 48.5
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 1.1e-22 110.2 108 45.4
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 1.1e-22 110.2 108 45.4
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 1.1e-22 110.2 96 50.0
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 1.4e-22 109.8 93 50.5
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 1.4e-22 109.8 107 42.1
Zm00001eb385240 Zea mays HOM05D003596 ORTHO05D004256 1.4e-22 109.8 103 49.5
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 1.8e-22 109.4 108 45.4
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 1.8e-22 109.4 108 45.4
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 1.8e-22 109.4 108 45.4
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 1.8e-22 109.4 97 47.4
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 1.8e-22 109.4 105 45.7
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 1.8e-22 109.4 97 48.5
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 1.8e-22 109.4 99 47.5
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 1.8e-22 109.4 99 47.5
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 2.4e-22 109.0 93 50.5
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 3.1e-22 108.6 108 44.4
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 3.1e-22 108.6 108 44.4
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 3.1e-22 108.6 97 47.4
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 3.1e-22 108.6 97 49.5
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 4.0e-22 108.2 108 44.4
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 6.8e-22 107.5 105 44.8
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 1.2e-21 106.7 93 49.5
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 1.2e-21 106.7 93 49.5
MBI12_g10638_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.0e-21 105.9 96 47.9
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 2.0e-21 105.9 93 50.5
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 4.4e-21 104.8 93 49.5
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 5.8e-21 104.4 93 48.4
HanXRQChr11g0345821 Helianthus annuus HOM05D003596 ORTHO05D004256 1.3e-20 103.2 81 53.1
ClCG05G018110 Citrullus lanatus HOM05D003596 ORTHO05D004256 2.9e-20 102.1 81 56.8
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 6.4e-20 100.9 108 40.7
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 1.1e-19 100.1 81 55.6
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.4e-19 99.0 95 45.3
Zm00001eb045600 Zea mays HOM05D003596 ORTHO05D004256 9.2e-19 97.1 81 54.3
Zm00001eb224980 Zea mays HOM05D003596 ORTHO05D004256 1.6e-18 96.3 81 53.1
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 2.1e-18 95.9 103 41.7
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 2.7e-18 95.5 103 43.7
Nitab4.5_0002797g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 2.7e-18 95.5 79 51.9
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 6.0e-18 94.4 103 44.7
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 7.8e-18 94.0 103 44.7
CBR_g6365 Chara braunii HOM05D003596 ORTHO05D004256 1.7e-17 92.8 97 43.3
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.9e-17 91.7 119 37.8
Cre09.g398700 Chlamydomonas reinhardtii HOM05D003596 ORTHO05D004256 1.5e-16 89.7 103 42.7
SMO115G0275 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 3.6e-15 85.1 106 38.7
CDE02G2104 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 1.8e-14 82.8 66 57.6
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 5.2e-14 81.3 105 41.9
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 4.4e-13 78.2 68 48.5
SMO111G0057 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 2.9e-12 75.5 93 37.6
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.4e-11 72.4 96 36.5
SEGI_31297 Sequoiadendron giganteum HOM05D003596 ORTHO05D004256 7.1e-11 70.9 98 32.7
Aa31LG7G10170 Aethionema arabicum HOM05D003596 ORTHO05D004256 1.2e-10 70.1 66 48.5
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.2e-10 70.1 99 35.4
SMO358G0603 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 6.0e-10 67.8 93 36.6
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 6.0e-10 67.8 93 36.6
Cfa024591 Carpinus fangiana HOM05D000084 ORTHO05D004256 3.9e-09 65.1 94 39.4
Lj1g0006265 Lotus japonicus HOM05D003596 ORTHO05D004256 8.7e-09 63.9 98 32.7
COL.COLO4_06847 Corchorus olitorius HOM05D003596 ORTHO05D004256 6.2e-07 57.8 75 40.0
MBI05_g33750_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.8e-06 56.2 79 43.0
MBI04_g31166_MAGBIO Magnolia biondii HOM05D007189 ORTHO05D241639 2.4e-06 55.8 36 63.9
MBI15_g37121_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 5.3e-06 54.7 36 72.2


User provided reference genes

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