Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 8.1e-146 520.4 262 100.0
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 7.9e-93 344.4 202 81.2
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 6.3e-90 334.7 202 78.2
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 6.9e-89 331.3 247 70.0
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.5e-88 330.1 210 75.7
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.0e-88 329.7 202 77.2
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 5.9e-88 328.2 248 66.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 5.9e-88 328.2 249 67.1
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.0e-87 327.4 251 68.5
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.0e-87 327.4 201 77.1
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-87 327.0 198 77.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.3e-87 327.0 271 62.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 2.2e-87 326.2 202 76.2
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.2e-87 326.2 202 76.2
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.9e-87 325.9 237 67.9
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 3.8e-87 325.5 251 68.1
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 5.0e-87 325.1 254 66.5
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 6.5e-87 324.7 226 68.1
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 6.5e-87 324.7 242 70.2
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.1e-86 323.9 214 73.8
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 1.9e-86 323.2 244 66.4
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.5e-86 322.8 250 64.8
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.2e-86 322.0 251 67.7
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 4.2e-86 322.0 236 68.6
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 5.5e-86 321.6 247 66.8
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 7.2e-86 321.2 234 69.2
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 7.2e-86 321.2 220 68.6
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.2e-85 320.5 253 64.0
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 2.7e-85 319.3 222 70.3
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.6e-85 318.9 232 66.8
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 2.3e-84 316.2 211 70.6
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 3.0e-84 315.8 253 62.8
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.0e-84 315.8 217 71.9
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.0e-84 315.8 209 70.8
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 3.9e-84 315.5 211 73.0
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 3.9e-84 315.5 195 76.9
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 5.1e-84 315.1 200 74.0
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.1e-84 315.1 247 64.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.1e-84 315.1 247 64.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 6.7e-84 314.7 204 74.5
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.8e-84 314.3 254 64.2
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.5e-83 313.5 228 64.9
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.5e-83 313.5 195 75.4
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.5e-83 313.5 225 67.1
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.4e-83 312.0 214 72.0
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 4.4e-83 312.0 235 66.8
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 5.7e-83 311.6 195 75.9
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.3e-82 310.5 239 65.3
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.3e-82 310.5 196 77.6
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.3e-82 310.5 205 73.2
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.7e-82 310.1 251 62.9
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.7e-82 310.1 230 67.8
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.2e-82 309.7 202 73.8
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.2e-82 309.7 228 64.9
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 2.2e-82 309.7 209 71.3
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.2e-82 309.7 194 75.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 6.3e-82 308.1 194 76.8
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 8.2e-82 307.8 206 72.3
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 8.2e-82 307.8 198 74.2
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.4e-81 307.0 205 71.2
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 2.4e-81 306.2 182 79.1
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.4e-81 306.2 207 70.5
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 5.3e-81 305.1 207 72.0
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 5.3e-81 305.1 202 71.3
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 7.0e-81 304.7 243 63.8
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 9.1e-81 304.3 194 74.2
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 9.1e-81 304.3 194 74.2
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.2e-80 303.9 257 62.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.2e-80 303.9 198 72.2
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.5e-80 303.5 217 67.3
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.0e-80 303.1 215 67.9
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.5e-80 302.4 194 75.8
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.5e-80 302.4 203 71.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.5e-80 302.0 194 73.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 4.5e-80 302.0 221 66.1
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 5.9e-80 301.6 198 71.7
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.3e-79 300.4 263 60.5
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 3.8e-79 298.9 194 73.7
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.9e-78 296.6 206 69.4
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 9.4e-78 294.3 207 70.5
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.6e-77 293.5 197 72.1
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.6e-77 293.5 203 69.0
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 1.0e-76 290.8 199 69.3
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.4e-76 290.4 211 67.8
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 5.2e-76 288.5 236 63.1
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 5.2e-76 288.5 203 69.5
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.1e-75 287.3 175 78.9
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 7.4e-75 284.6 201 69.7
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 9.7e-75 284.3 179 72.6
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.4e-73 280.4 179 72.1
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 2.4e-73 279.6 170 76.5
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.2e-72 277.3 178 74.7
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 5.9e-72 275.0 167 76.6
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 7.7e-72 274.6 254 57.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.5e-70 270.4 198 66.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 8.8e-68 261.2 169 74.0
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.7e-63 246.9 200 59.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.8e-63 245.7 138 83.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 6.5e-63 245.0 198 61.1
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.7e-61 239.6 182 67.6
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.3e-58 230.7 200 58.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.8e-58 229.6 174 59.2
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.1e-57 227.6 215 52.6
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.4e-57 226.5 255 47.5
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 8.6e-39 164.9 162 51.2
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.4e-33 146.7 125 62.4
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.4e-26 122.1 75 77.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.7e-23 114.0 64 79.7
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 9.6e-22 108.2 60 80.0
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.4e-20 104.4 227 33.5
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 1.7e-18 97.4 167 38.9
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.3e-17 91.7 84 58.3
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.3e-10 71.2 63 49.2


User provided reference genes

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