Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.0e-85 320.1 165 100.0
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 6.0e-54 214.5 115 96.5
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 6.6e-53 211.1 114 95.6
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 8.6e-53 210.7 115 94.8
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 8.6e-53 210.7 115 94.8
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.5e-52 209.9 115 95.7
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.9e-52 209.5 115 93.9
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 7.3e-52 207.6 115 93.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 7.3e-52 207.6 115 94.8
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 9.5e-52 207.2 115 93.0
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 9.5e-52 207.2 115 92.2
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 9.5e-52 207.2 115 93.0
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 9.5e-52 207.2 115 93.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.6e-51 206.5 115 93.9
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.6e-51 206.5 115 93.9
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 2.1e-51 206.1 115 93.0
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.1e-51 206.1 118 91.5
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 2.8e-51 205.7 126 85.7
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 2.8e-51 205.7 115 91.3
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 3.6e-51 205.3 108 100.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 3.6e-51 205.3 115 92.2
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 4.7e-51 204.9 126 84.9
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 4.7e-51 204.9 113 93.8
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 6.2e-51 204.5 115 92.2
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 6.2e-51 204.5 129 82.9
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.1e-50 203.8 115 90.4
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.1e-50 203.8 115 92.2
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-50 203.4 115 92.2
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-50 203.4 115 92.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.4e-50 203.4 115 91.3
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.4e-50 203.4 115 91.3
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.8e-50 203.0 115 91.3
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.8e-50 203.0 115 91.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.8e-50 203.0 115 91.3
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.8e-50 203.0 115 88.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.8e-50 203.0 115 90.4
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 2.3e-50 202.6 115 91.3
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 3.1e-50 202.2 115 91.3
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 3.1e-50 202.2 115 90.4
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 3.1e-50 202.2 116 90.5
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.1e-50 202.2 115 91.3
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 4.0e-50 201.8 125 84.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 4.0e-50 201.8 115 89.6
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 4.0e-50 201.8 115 88.7
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 4.0e-50 201.8 116 87.1
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 4.0e-50 201.8 110 94.5
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.2e-50 201.4 115 90.4
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.2e-50 201.4 115 90.4
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.2e-50 201.4 115 90.4
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 6.8e-50 201.1 115 90.4
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 6.8e-50 201.1 112 92.9
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 6.8e-50 201.1 115 91.3
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.8e-50 201.1 115 90.4
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 6.8e-50 201.1 115 90.4
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 6.8e-50 201.1 115 89.6
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 8.9e-50 200.7 115 91.3
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 8.9e-50 200.7 115 88.7
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 8.9e-50 200.7 115 88.7
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.2e-49 200.3 115 88.7
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.2e-49 200.3 116 88.8
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.5e-49 199.9 114 90.4
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.5e-49 199.9 114 90.4
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.5e-49 199.9 115 89.6
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.0e-49 199.5 115 90.4
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 2.0e-49 199.5 115 91.3
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.0e-49 199.5 115 89.6
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.0e-49 199.5 110 93.6
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.6e-49 199.1 115 89.6
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.6e-49 199.1 115 87.8
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 2.6e-49 199.1 115 87.8
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 3.4e-49 198.7 112 92.9
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 3.4e-49 198.7 112 92.9
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 5.8e-49 198.0 115 91.3
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 5.8e-49 198.0 117 90.6
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 5.8e-49 198.0 115 88.7
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.8e-49 198.0 115 88.7
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.8e-49 198.0 115 91.3
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 7.5e-49 197.6 115 87.0
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 9.8e-49 197.2 115 91.3
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 9.8e-49 197.2 115 87.8
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.3e-48 196.8 112 91.1
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.3e-48 196.8 112 91.1
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.3e-48 196.8 112 91.1
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.3e-48 196.8 115 88.7
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 1.3e-48 196.8 126 84.1
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-48 196.4 115 87.8
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.7e-48 196.4 112 90.2
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 2.2e-48 196.1 113 89.4
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.2e-48 196.1 113 89.4
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.2e-48 196.1 113 89.4
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.2e-48 196.1 113 89.4
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 2.2e-48 196.1 115 87.8
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.9e-48 195.7 115 90.4
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.9e-48 195.7 112 90.2
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 2.9e-48 195.7 112 90.2
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 4.9e-48 194.9 113 88.5
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 6.4e-48 194.5 115 88.7
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 6.4e-48 194.5 129 79.8
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.1e-47 193.7 115 87.0
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.1e-47 193.7 115 87.0
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.1e-47 193.7 112 89.3
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 1.4e-47 193.4 115 87.8
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.4e-47 193.4 113 89.4
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.4e-47 193.4 115 86.1
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.9e-47 193.0 112 89.3
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.9e-47 193.0 115 87.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.9e-47 193.0 115 87.0
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 3.2e-47 192.2 115 85.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 4.1e-47 191.8 115 86.1
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 7.1e-47 191.0 115 85.2
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 7.1e-47 191.0 116 84.5
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 9.2e-47 190.7 115 84.3
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 9.2e-47 190.7 115 85.2
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-46 190.3 115 87.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.1e-46 189.5 115 84.3
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 3.5e-46 188.7 110 89.1
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.5e-46 188.7 115 87.0
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.6e-46 188.3 115 83.5
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.0e-45 187.2 106 92.5
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.3e-45 186.8 129 79.1
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.0e-45 185.7 115 82.6
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 3.0e-45 185.7 108 88.9
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.9e-45 185.3 114 82.5
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 4.7e-43 178.3 108 87.0
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 8.1e-43 177.6 123 80.5
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.4e-42 176.8 112 82.1
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.4e-42 176.8 151 65.6
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.2e-41 173.7 108 80.6
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 4.9e-40 168.3 113 72.6
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.4e-39 166.8 106 84.9
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.4e-39 164.9 117 69.2
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.5e-38 162.2 110 74.5
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 7.8e-38 161.0 110 74.5
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.7e-37 159.8 104 77.9
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 5.1e-37 158.3 95 86.3
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.1e-37 158.3 116 75.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.1e-37 158.3 116 75.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 5.1e-37 158.3 115 74.8
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 7.3e-36 154.5 111 70.3
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.2e-35 153.7 121 68.6
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.4e-34 150.2 125 69.6
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.8e-34 149.8 110 74.5
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 2.6e-33 146.0 115 73.0
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 7.6e-33 144.4 83 90.4
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 4.9e-32 141.7 90 78.9
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 8.4e-32 141.0 129 64.3
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 3.0e-29 132.5 83 81.9
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.5e-28 130.2 278 35.6
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 2.1e-27 126.3 109 58.7
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.3e-24 117.1 91 72.5
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 6.4e-24 114.8 85 74.1
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 2.4e-23 112.8 99 66.7
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 2.4e-23 112.8 86 75.6
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 7.1e-23 111.3 101 55.4
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 1.6e-22 110.2 86 74.4
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 1.6e-22 110.2 86 74.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.1e-22 109.8 90 71.1
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 2.2e-16 89.7 49 91.8
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.4e-15 86.3 47 91.5
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 5.5e-15 85.1 75 61.3
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 5.1e-13 78.6 63 66.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 5.1e-13 78.6 44 90.9
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.9e-12 76.6 49 81.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 4.0e-10 68.9 39 87.2


User provided reference genes

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