Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02277 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 9.8e-92 340.1 172 100.0
Aqoxy2G01924 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 2.6e-60 235.7 129 95.3
Aqoxy6G01748 Aquilegia oxysepala HOM05D004220 ORTHO05D006217 3.8e-59 231.9 121 98.3
Aqoxy6G01744 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.9e-58 229.6 121 97.5
TAR622G1230 Trochodendron aralioides HOM05D004220 ORTHO05D006217 7.6e-52 207.6 121 85.1
Lalb_Chr16g0387441 Lupinus albus HOM05D004220 ORTHO05D006217 4.9e-51 204.9 121 83.5
Medtr8g105860 Medicago truncatula HOM05D004220 ORTHO05D006217 4.9e-51 204.9 121 82.6
Nn4g24652 Nelumbo nucifera HOM05D004220 ORTHO05D006217 6.4e-51 204.5 121 83.5
Ca_17252_v3 Cicer arietinum L. HOM05D004220 ORTHO05D006217 4.2e-50 201.8 121 81.8
Psat4g004640 Pisum sativum HOM05D004220 ORTHO05D006217 5.4e-50 201.4 121 81.0
TAR371G0933 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.6e-49 199.9 121 80.2
Lj4g0025833 Lotus japonicus HOM05D004220 ORTHO05D006217 2.1e-49 199.5 121 80.2
LjContig00081g0015221 Lotus japonicus HOM05D004220 ORTHO05D006217 2.1e-49 199.5 121 80.2
PSO541G1847 Papaver somniferum HOM05D004220 ORTHO05D006217 2.1e-49 199.5 121 84.3
TAR629G1713 Trochodendron aralioides HOM05D004220 ORTHO05D006217 2.1e-49 199.5 121 80.2
Lsat_1_v5_gn_8_35340 Lactuca sativa HOM05D004220 ORTHO05D006217 6.0e-49 198.0 121 81.8
Glyma.08G047800 Glycine max HOM05D004220 ORTHO05D006217 7.9e-49 197.6 121 79.3
PSO302G0185 Papaver somniferum HOM05D004220 ORTHO05D006217 1.8e-48 196.4 121 83.5
TAR629G0578 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.8e-48 196.4 121 78.5
Actinidia12400 Actinidia chinensis HOM05D004220 ORTHO05D006217 2.3e-48 196.1 121 80.2
QL03p036195 Quercus lobata HOM05D004220 ORTHO05D006217 2.3e-48 196.1 121 77.7
ECA233G3753 Erigeron canadensis HOM05D004220 ORTHO05D006217 3.0e-48 195.7 121 81.0
Glyma.05G240700 Glycine max HOM05D004220 ORTHO05D006217 3.0e-48 195.7 121 77.7
Dinv18907 Davidia involucrata HOM05D004220 ORTHO05D006217 3.9e-48 195.3 121 80.2
Phvul.002G323900 Phaseolus vulgaris HOM05D004220 ORTHO05D006217 5.1e-48 194.9 121 77.7
Ciclev10015633m.g Citrus clementina HOM05D004220 ORTHO05D006217 6.7e-48 194.5 121 79.3
Potri.008G135700 Populus trichocarpa HOM05D004220 ORTHO05D006217 8.7e-48 194.1 121 76.9
Sabra08G0103700 Salix brachista HOM05D004220 ORTHO05D006217 8.7e-48 194.1 121 76.9
CANSAT78G0088 Cannabis sativa HOM05D004220 ORTHO05D006217 1.1e-47 193.7 121 79.3
CBR_g30041 Chara braunii HOM05D004220 ORTHO05D006217 1.5e-47 193.4 121 78.5
Potri.010G105000 Populus trichocarpa HOM05D004220 ORTHO05D006217 1.5e-47 193.4 121 76.0
Potri.010G105300 Populus trichocarpa HOM05D004220 ORTHO05D006217 1.5e-47 193.4 121 76.0
Lalb_Chr05g0222081 Lupinus albus HOM05D004220 ORTHO05D006217 1.9e-47 193.0 123 76.4
VMungo0251G0500 Vigna mungo HOM05D004220 ORTHO05D006217 1.9e-47 193.0 121 76.9
AUR62015160 Chenopodium quinoa HOM05D004220 ORTHO05D006217 2.5e-47 192.6 121 76.9
Dinv26357 Davidia involucrata HOM05D004220 ORTHO05D006217 2.5e-47 192.6 121 80.2
ATR0763G027 Amborella trichopoda HOM05D004220 ORTHO05D006217 3.3e-47 192.2 121 78.5
CDE07G1395 Ceratophyllum demersum HOM05D004220 ORTHO05D006217 3.3e-47 192.2 121 76.0
Migut.E00492 Erythranthe guttata HOM05D004220 ORTHO05D006217 3.3e-47 192.2 121 76.0
CAN.G282.120 Capsicum annuum HOM05D004220 ORTHO05D006217 4.3e-47 191.8 121 74.4
Peaxi162Scf00275g00215 Petunia axillaris HOM05D004220 ORTHO05D006217 4.3e-47 191.8 121 75.2
Rhsim09G0088900 Rhododendron simsii HOM05D004220 ORTHO05D006217 4.3e-47 191.8 121 78.5
PGSC0003DMG400022796 Solanum tuberosum HOM05D004220 ORTHO05D006217 4.3e-47 191.8 121 74.4
Lalb_Chr09g0330781 Lupinus albus HOM05D004220 ORTHO05D006217 5.6e-47 191.4 121 77.7
Oeu044002.1 Olea europaea HOM05D004220 ORTHO05D006217 5.6e-47 191.4 121 76.0
AUR62017612 Chenopodium quinoa HOM05D004220 ORTHO05D006217 7.4e-47 191.0 121 75.2
Solyc01g005250.4 Solanum lycopersicum HOM05D004220 ORTHO05D006217 7.4e-47 191.0 121 73.6
Sopen01g001280 Solanum pennellii HOM05D004220 ORTHO05D006217 7.4e-47 191.0 121 73.6
Eucgr.B03437 Eucalyptus grandis HOM05D004220 ORTHO05D006217 9.6e-47 190.7 121 76.9
BcaC05g25401 Brassica carinata HOM05D004220 ORTHO05D006217 1.3e-46 190.3 121 77.7
BolC5t30019H Brassica oleracea HOM05D004220 ORTHO05D006217 1.3e-46 190.3 121 77.7
DCAR_022139 Daucus carota HOM05D004220 ORTHO05D006217 1.3e-46 190.3 121 77.7
Manes.15G135500 Manihot esculenta HOM05D004220 ORTHO05D006217 1.3e-46 190.3 121 76.0
Hund08335 Selenicereus undatus HOM05D004220 ORTHO05D006217 1.3e-46 190.3 121 76.9
AL1G26830 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 1.6e-46 189.9 121 76.9
DCAR_002675 Daucus carota HOM05D004220 ORTHO05D006217 1.6e-46 189.9 121 77.7
Aa31LG1G290 Aethionema arabicum HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 77.7
EL10Ac9g22864 Beta vulgaris HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 76.9
BcaB03g13081 Brassica carinata HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 77.7
BraA06t24264Z Brassica rapa HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 77.7
Cpa.g.sc2.184 Carica papaya HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 77.7
MELO3C010427.2 Cucumis melo HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 76.9
HanXRQChr12g0364941 Helianthus annuus HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 77.7
Nitab4.5_0000640g0100 Nicotiana tabacum HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 73.6
THA.LOC104824123 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 2.1e-46 189.5 121 76.9
arahy.Tifrunner.gnm1.ann1.GF1W8W Arachis hypogaea HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 76.9
MSTRG.13631 Avicennia marina HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 73.6
A06p10860 Brassica napus HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 77.7
C05p12790 Brassica napus HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 76.9
SGA_v2.0_scaffold143G35733 Striga asiatica HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 75.2
THA.LOC104805088 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 77.7
TWI74G0333 Tripterygium wilfordii HOM05D004220 ORTHO05D006217 2.8e-46 189.1 121 76.0
BcaB02g06550 Brassica carinata HOM05D004220 ORTHO05D006217 3.7e-46 188.7 121 76.0
MBI05_g37451_MAGBIO Magnolia biondii HOM05D004220 ORTHO05D006217 3.7e-46 188.7 123 75.6
Ah.05g168430 Amaranthus hybridus HOM05D004220 ORTHO05D006217 4.8e-46 188.3 121 76.0
Lj6A736T83 Lonicera japonica HOM05D004220 ORTHO05D006217 4.8e-46 188.3 121 77.7
SEGI_30189 Sequoiadendron giganteum HOM05D004220 ORTHO05D006217 4.8e-46 188.3 121 72.7
BcaC07g38762 Brassica carinata HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 76.9
C08p16920 Brassica napus HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 76.9
BolC8t49319H Brassica oleracea HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 76.9
BraA08t35103Z Brassica rapa HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 76.9
CARHR015340 Cardamine hirsuta HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 75.2
SalBow2G3345 Salvia bowleyana HOM05D004220 ORTHO05D006217 8.1e-46 187.6 121 75.2
CiPaw.06G053400 Carya illinoinensis HOM05D004220 ORTHO05D006217 1.1e-45 187.2 121 75.2
ClCG07G005480 Citrullus lanatus HOM05D004220 ORTHO05D006217 1.1e-45 187.2 121 75.2
PGR102G3065 Punica granatum HOM05D004220 ORTHO05D006217 1.1e-45 187.2 121 74.4
A08p31810 Brassica napus HOM05D004220 ORTHO05D006217 1.8e-45 186.4 121 76.0
CsaV3_5G014440 Cucumis sativus L. HOM05D004220 ORTHO05D006217 1.8e-45 186.4 121 76.0
Sp1g13250 Schrenkiella parvula HOM05D004220 ORTHO05D006217 1.8e-45 186.4 121 75.2
AT1G14810 Arabidopsis thaliana HOM05D004220 ORTHO05D006217 2.4e-45 186.0 121 76.0
Thhalv10007952m.g Eutrema salsugineum HOM05D004220 ORTHO05D006217 3.1e-45 185.7 121 75.2
Sc17g0004200 Simmondsia chinensis HOM05D004220 ORTHO05D006217 3.1e-45 185.7 121 74.4
Carub.0001s1460 Capsella rubella HOM05D004220 ORTHO05D006217 4.0e-45 185.3 121 75.2
Atru.chr11.900 Acer truncatum HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 76.0
Cfa015032 Carpinus fangiana HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 74.4
Sed0023691 Sechium edule HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 74.4
SGA_v2.0_scaffold23G10178 Striga asiatica HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 72.7
unitig_27.g25162 Utricularia gibba HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 72.7
unitig_29.g31883 Utricularia gibba HOM05D004220 ORTHO05D006217 5.3e-45 184.9 121 72.7
RcHm_v2.0_Chr4g0442761 Rosa chinensis HOM05D004220 ORTHO05D006217 6.9e-45 184.5 121 74.4
Haze_10865 Corylus avellana HOM05D004220 ORTHO05D006217 1.5e-44 183.3 121 73.6
Sed0000427 Sechium edule HOM05D004220 ORTHO05D006217 1.5e-44 183.3 121 75.2
MD13G1019500 Malus domestica HOM05D004220 ORTHO05D006217 4.5e-44 181.8 121 73.6
FAN07G0058 Fragaria x ananassa HOM05D004220 ORTHO05D006217 5.8e-44 181.4 121 71.1
FAN07G1238 Fragaria x ananassa HOM05D004220 ORTHO05D006217 5.8e-44 181.4 121 71.1
FAN17G0395 Fragaria x ananassa HOM05D004220 ORTHO05D006217 5.8e-44 181.4 121 71.1
FvH4_4g33450 Fragaria vesca HOM05D004220 ORTHO05D006217 7.6e-44 181.0 121 71.1
FAN12G0660 Fragaria x ananassa HOM05D004220 ORTHO05D006217 7.6e-44 181.0 121 71.1
Pp3c5_10760 Physcomitrium patens HOM05D004220 ORTHO05D006217 7.6e-44 181.0 121 73.6
SMO119G0035 Selaginella moellendorffii HOM05D004220 ORTHO05D006217 7.6e-44 181.0 123 72.4
COL.COLO4_27642 Corchorus olitorius HOM05D004220 ORTHO05D006217 2.9e-43 179.1 121 71.9
MD16G1017700 Malus domestica HOM05D004220 ORTHO05D006217 2.9e-43 179.1 121 71.9
FAN22G0209 Fragaria x ananassa HOM05D004220 ORTHO05D006217 3.8e-43 178.7 121 70.2
Gohir.D13G025700 Gossypium hirsutum HOM05D004220 ORTHO05D006217 4.9e-43 178.3 121 71.1
Gorai.013G028900 Gossypium raimondii HOM05D004220 ORTHO05D006217 4.9e-43 178.3 121 71.1
HPP92_001024 Vanilla planifolia HOM05D004220 ORTHO05D006217 8.4e-43 177.6 128 66.4
Thecc.02G309700 Theobroma cacao HOM05D004220 ORTHO05D006217 1.4e-42 176.8 121 70.2
Duzib251G0717 Durio zibethinus HOM05D004220 ORTHO05D006217 1.9e-42 176.4 121 71.1
Gohir.A12G154900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 1.9e-42 176.4 121 70.2
AagrBONN_evm.TU.Sc2ySwM_368.1674 Anthoceros agrestis HOM05D004220 ORTHO05D006217 3.2e-42 175.6 121 68.6
Gohir.A13G026900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 3.2e-42 175.6 121 70.2
Gorai.008G170900 Gossypium raimondii HOM05D004220 ORTHO05D006217 4.2e-42 175.3 121 70.2
Prupe.1G334400 Prunus persica HOM05D004220 ORTHO05D006217 5.5e-42 174.9 121 71.9
Gohir.D12G158100 Gossypium hirsutum HOM05D004220 ORTHO05D006217 9.3e-42 174.1 121 69.4
Duzib248G1338 Durio zibethinus HOM05D004220 ORTHO05D006217 3.5e-41 172.2 121 69.4
Zm00001eb214360 Zea mays HOM05D004220 ORTHO05D006217 1.0e-40 170.6 122 65.6
Mapoly0086s0044 Marchantia polymorpha HOM05D004220 ORTHO05D006217 3.0e-40 169.1 121 67.8
HanXRQChr06g0171081 Helianthus annuus HOM05D004220 ORTHO05D006217 1.1e-39 167.2 111 74.8
Cre09.g389689 Chlamydomonas reinhardtii HOM05D004220 ORTHO05D006217 4.3e-39 165.2 116 71.6
MCO01G646 Micromonas commoda HOM05D004220 ORTHO05D006217 1.6e-38 163.3 116 68.1
TPR.G19271 Trifolium pratense HOM05D004220 ORTHO05D006217 1.1e-37 160.6 98 81.6
Aqoxy5G02471 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.8e-37 159.8 83 100.0
Os03g0760700 Oryza sativa ssp. japonica HOM05D004220 ORTHO05D006217 5.3e-37 158.3 122 63.1
Aqoxy3G02388 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 9.0e-37 157.5 121 72.7
Actinidia36618 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.5e-36 156.8 121 69.4
Aqoxy5G02966 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.5e-36 156.8 82 98.8
Aqoxy5G02658 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 2.0e-36 156.4 81 100.0
CDE12G0826 Ceratophyllum demersum HOM05D004220 ORTHO05D017372 1.8e-32 143.3 113 64.6
Nitab4.5_0000198g0090 Nicotiana tabacum HOM05D004220 ORTHO05D006217 1.0e-24 117.5 70 75.7
MSTRG.2121 Avicennia marina HOM05D004220 ORTHO05D017372 8.7e-24 114.4 82 68.3
PRCOL_00000291 Prasinoderma coloniale HOM05D004220 ORTHO05D006217 1.9e-23 113.2 83 66.3
BcaB08g34410 Brassica carinata HOM05D001471 ORTHO05D001325 2.0e-15 86.7 81 59.3


User provided reference genes

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