Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02261 Aquilegia oxysepala HOM05D005371 ORTHO05D000006 2.1e-103 379.0 192 100.0
Aqoxy1G03380 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.2e-27 125.6 79 72.2
Aqoxy5G02485 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-22 110.9 78 60.3
Aqoxy3G01336 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.2e-19 98.2 78 55.1
Aqoxy7G00162 Aquilegia oxysepala HOM05D005371 ORTHO05D006863 7.2e-19 98.2 79 67.1
Aqoxy4G01593 Aquilegia oxysepala HOM05D000003 ORTHO05D018399 2.8e-18 96.3 82 56.1
MBI13_g15010_MAGBIO Magnolia biondii HOM05D005371 ORTHO05D006863 3.6e-18 95.9 78 67.9
Prupe.1G149000 Prunus persica HOM05D005371 ORTHO05D006863 3.6e-18 95.9 78 62.8
TWI53G1142 Tripterygium wilfordii HOM05D005371 ORTHO05D006863 3.0e-17 92.8 78 61.5
HPP92_012442 Vanilla planifolia HOM05D005371 ORTHO05D006863 4.0e-17 92.4 78 62.8
HanXRQChr08g0218651 Helianthus annuus HOM05D005371 ORTHO05D006863 6.8e-17 91.7 136 40.4
CiPaw.01G158300 Carya illinoinensis HOM05D005371 ORTHO05D006863 8.9e-17 91.3 74 62.2
AUR62002624 Chenopodium quinoa HOM05D005371 ORTHO05D006863 8.9e-17 91.3 78 61.5
AUR62030040 Chenopodium quinoa HOM05D005371 ORTHO05D006863 8.9e-17 91.3 78 61.5
Ciclev10005567m.g Citrus clementina HOM05D005371 ORTHO05D006863 8.9e-17 91.3 79 62.0
PSO135G0635 Papaver somniferum HOM05D005371 ORTHO05D006863 8.9e-17 91.3 80 56.2
MD13G1180900 Malus domestica HOM05D005371 ORTHO05D006863 1.2e-16 90.9 78 60.3
Nn2g14732 Nelumbo nucifera HOM05D005371 ORTHO05D006863 1.2e-16 90.9 80 57.5
Sed0019484 Sechium edule HOM05D005371 ORTHO05D006863 1.2e-16 90.9 78 59.0
ATR0307G094 Amborella trichopoda HOM05D005371 ORTHO05D006863 1.5e-16 90.5 78 60.3
CDE02G4078 Ceratophyllum demersum HOM05D005371 ORTHO05D006863 1.5e-16 90.5 78 57.7
RcHm_v2.0_Chr4g0418951 Rosa chinensis HOM05D005371 ORTHO05D006863 1.5e-16 90.5 78 57.7
Sc19g0004630 Simmondsia chinensis HOM05D005371 ORTHO05D006863 1.5e-16 90.5 55 78.2
CSS0011749 Camellia sinensis var. sinensis HOM05D005371 ORTHO05D006863 2.0e-16 90.1 55 78.2
CSS0026299 Camellia sinensis var. sinensis HOM05D005371 ORTHO05D006863 2.0e-16 90.1 55 78.2
FvH4_4g14220 Fragaria vesca HOM05D005371 ORTHO05D006863 2.0e-16 90.1 78 57.7
FAN07G1015 Fragaria x ananassa HOM05D005371 ORTHO05D006863 2.0e-16 90.1 78 57.7
FAN12G2714 Fragaria x ananassa HOM05D005371 ORTHO05D006863 2.0e-16 90.1 78 57.7
CDE06G0660 Ceratophyllum demersum HOM05D005371 ORTHO05D006863 2.6e-16 89.7 55 76.4
Ciclev10026219m.g Citrus clementina HOM05D005371 ORTHO05D006863 2.6e-16 89.7 78 53.8
MD16G1181600 Malus domestica HOM05D005371 ORTHO05D006863 2.6e-16 89.7 78 59.0
TAR633G1547 Trochodendron aralioides HOM05D005371 ORTHO05D006863 2.6e-16 89.7 55 76.4
Actinidia00081 Actinidia chinensis HOM05D005371 ORTHO05D006863 3.4e-16 89.4 55 80.0
Ca_00612_v3 Cicer arietinum L. HOM05D005371 ORTHO05D006863 3.4e-16 89.4 55 74.5
Migut.G00256 Erythranthe guttata HOM05D005371 ORTHO05D006863 3.4e-16 89.4 55 74.5
Lsat_1_v5_gn_8_20540 Lactuca sativa HOM05D005371 ORTHO05D006863 3.4e-16 89.4 127 40.9
Sed0017990 Sechium edule HOM05D005371 ORTHO05D006863 3.4e-16 89.4 78 57.7
Actinidia08521 Actinidia chinensis HOM05D005371 ORTHO05D006863 4.4e-16 89.0 55 76.4
DCAR_021293 Daucus carota HOM05D005371 ORTHO05D006863 4.4e-16 89.0 55 78.2
Hund12213 Selenicereus undatus HOM05D005371 ORTHO05D006863 4.4e-16 89.0 78 60.3
SEGI_38554 Sequoiadendron giganteum HOM05D005371 ORTHO05D006863 4.4e-16 89.0 99 45.5
MELO3C006575.2 Cucumis melo HOM05D005371 ORTHO05D006863 5.7e-16 88.6 78 55.1
Dinv38368 Davidia involucrata HOM05D002181 ORTHO05D003287 5.7e-16 88.6 79 58.2
Hma1.2p1_3925F.1_g337960 Hydrangea macrophylla HOM05D005371 ORTHO05D006863 5.7e-16 88.6 78 57.7
Potri.010G029400 Populus trichocarpa HOM05D005371 ORTHO05D006863 5.7e-16 88.6 78 56.4
Sabra08G0160600 Salix brachista HOM05D005371 ORTHO05D006863 5.7e-16 88.6 78 56.4
Potri.008G200600 Populus trichocarpa HOM05D005371 ORTHO05D006863 7.5e-16 88.2 78 56.4
SalBow2G1082 Salvia bowleyana HOM05D000137 ORTHO05D000503 7.5e-16 88.2 87 51.7
MSTRG.24760 Avicennia marina HOM05D005371 ORTHO05D006863 1.3e-15 87.4 109 45.9
Cpa.g.sc16.46 Carica papaya HOM05D005371 ORTHO05D006863 1.3e-15 87.4 55 70.9
ClCG05G005500 Citrullus lanatus HOM05D005371 ORTHO05D006863 1.3e-15 87.4 74 59.5
Os03g0320900 Oryza sativa ssp. japonica HOM05D005371 ORTHO05D006863 1.3e-15 87.4 97 47.4
CsaV3_3G013820 Cucumis sativus L. HOM05D005371 ORTHO05D006863 1.7e-15 87.0 78 55.1
Aqoxy1G03494 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-15 86.7 74 50.0
TPR.G28919 Trifolium pratense HOM05D005371 ORTHO05D006863 2.2e-15 86.7 55 70.9
CANSAT78G0247 Cannabis sativa HOM05D005371 ORTHO05D006863 2.8e-15 86.3 78 59.0
Manes.03G186400 Manihot esculenta HOM05D005371 ORTHO05D006863 2.8e-15 86.3 78 55.1
Aa31LG11G10740 Aethionema arabicum HOM05D005371 ORTHO05D006863 3.7e-15 85.9 78 55.1
Lj6P663T68 Lonicera japonica HOM05D005371 ORTHO05D006863 3.7e-15 85.9 55 72.7
PGR031G1359 Punica granatum HOM05D005371 ORTHO05D006863 3.7e-15 85.9 78 56.4
TAR362G1168 Trochodendron aralioides HOM05D005371 ORTHO05D006863 3.7e-15 85.9 55 74.5
Thhalv10016095m.g Eutrema salsugineum HOM05D005371 ORTHO05D006863 4.9e-15 85.5 55 72.7
Gohir.A09G200400 Gossypium hirsutum HOM05D005371 ORTHO05D006863 6.3e-15 85.1 99 45.5
Thecc.04G219500 Theobroma cacao HOM05D005371 ORTHO05D006863 6.3e-15 85.1 78 56.4
Atru.chr4.2593 Acer truncatum HOM05D005371 ORTHO05D006863 8.3e-15 84.7 55 72.7
Ah.13g074330 Amaranthus hybridus HOM05D005371 ORTHO05D006863 8.3e-15 84.7 78 56.4
ECA232G2257 Erigeron canadensis HOM05D005371 ORTHO05D006863 8.3e-15 84.7 136 36.0
Eucgr.B01158 Eucalyptus grandis HOM05D005371 ORTHO05D006863 8.3e-15 84.7 109 42.2
Zm00001eb015260 Zea mays HOM05D005371 ORTHO05D006863 8.3e-15 84.7 78 55.1
BcaC05g30047 Brassica carinata HOM05D005371 ORTHO05D006863 1.1e-14 84.3 79 58.2
COL.COLO4_21626 Corchorus olitorius HOM05D005371 ORTHO05D006863 1.1e-14 84.3 79 57.0
HanXRQChr10g0304241 Helianthus annuus HOM05D005371 ORTHO05D006863 1.1e-14 84.3 53 75.5
Lalb_Chr20g0118351 Lupinus albus HOM05D005371 ORTHO05D006863 1.1e-14 84.3 55 70.9
Nitab4.5_0007396g0010 Nicotiana tabacum HOM05D005371 ORTHO05D006863 1.1e-14 84.3 78 60.3
Nitab4.5_0012725g0010 Nicotiana tabacum HOM05D005371 ORTHO05D006863 1.1e-14 84.3 78 60.3
Peaxi162Scf00589g00036 Petunia axillaris HOM05D005371 ORTHO05D006863 1.4e-14 84.0 78 57.7
QL06p005861 Quercus lobata HOM05D005371 ORTHO05D006863 1.4e-14 84.0 98 43.9
Solyc11g005900.2 Solanum lycopersicum HOM05D005371 ORTHO05D006863 1.4e-14 84.0 78 60.3
Sopen11g001840 Solanum pennellii HOM05D005371 ORTHO05D006863 1.4e-14 84.0 78 60.3
PGSC0003DMG400035738 Solanum tuberosum HOM05D005371 ORTHO05D006863 1.4e-14 84.0 78 60.3
Atru.chr4.2595 Acer truncatum HOM05D005371 ORTHO05D006863 1.8e-14 83.6 55 70.9
Carub.0006s1730 Capsella rubella HOM05D005371 ORTHO05D006863 1.8e-14 83.6 55 70.9
CARHR194010 Cardamine hirsuta HOM05D005371 ORTHO05D006863 1.8e-14 83.6 55 70.9
Gohir.D09G194600 Gossypium hirsutum HOM05D005371 ORTHO05D006863 1.8e-14 83.6 99 45.5
Gorai.006G218000 Gossypium raimondii HOM05D005371 ORTHO05D006863 1.8e-14 83.6 99 45.5
Psat1g184760 Pisum sativum HOM05D005371 ORTHO05D006863 2.4e-14 83.2 55 69.1
Rhsim02G0018900 Rhododendron simsii HOM05D005371 ORTHO05D006863 2.4e-14 83.2 78 59.0
Sp6g25400 Schrenkiella parvula HOM05D005371 ORTHO05D006863 2.4e-14 83.2 55 67.3
Lj6g0013027 Lotus japonicus HOM05D005371 ORTHO05D006863 3.1e-14 82.8 55 69.1
Oeu037674.1 Olea europaea HOM05D005371 ORTHO05D006863 4.1e-14 82.4 109 44.0
Aa31LG5G16730 Aethionema arabicum HOM05D005371 ORTHO05D006863 5.4e-14 82.0 55 70.9
CARHR080720 Cardamine hirsuta HOM05D005371 ORTHO05D006863 5.4e-14 82.0 78 55.1
Glyma.13G210400 Glycine max HOM05D005371 ORTHO05D006863 5.4e-14 82.0 97 43.3
unitig_8.g3082 Utricularia gibba HOM05D001103 ORTHO05D000954 5.4e-14 82.0 109 43.1
vmacro15298 Vaccinium macrocarpon HOM05D005371 ORTHO05D006863 5.4e-14 82.0 78 57.7
CAN.G652.5 Capsicum annuum HOM05D005371 ORTHO05D006863 7.0e-14 81.6 79 57.0
CsaV3_3G013810 Cucumis sativus L. HOM05D005371 ORTHO05D006863 7.0e-14 81.6 55 70.9
Duzib151G0238 Durio zibethinus HOM05D005371 ORTHO05D006863 7.0e-14 81.6 78 55.1
Thhalv10021285m.g Eutrema salsugineum HOM05D005371 ORTHO05D006863 7.0e-14 81.6 55 70.9
Phvul.006G155400 Phaseolus vulgaris HOM05D005371 ORTHO05D006863 7.0e-14 81.6 97 44.3
Cc03_g02980 Coffea canephora HOM05D005371 ORTHO05D006863 9.2e-14 81.3 78 53.8
MSTRG.3982 Avicennia marina HOM05D005371 ORTHO05D006863 1.2e-13 80.9 140 35.7
EL10Ac6g13948 Beta vulgaris HOM05D005371 ORTHO05D006863 1.2e-13 80.9 78 53.8
Gohir.A10G115500 Gossypium hirsutum HOM05D005371 ORTHO05D006863 1.2e-13 80.9 78 52.6
Gorai.011G168200 Gossypium raimondii HOM05D005371 ORTHO05D006863 1.2e-13 80.9 78 52.6
Sp3g05120 Schrenkiella parvula HOM05D005371 ORTHO05D006863 1.2e-13 80.9 78 53.8
AL3G17060 Arabidopsis lyrata HOM05D005371 ORTHO05D006863 1.6e-13 80.5 78 53.8
AT3G06200 Arabidopsis thaliana HOM05D005371 ORTHO05D006863 1.6e-13 80.5 78 53.8
BcaC05g29797 Brassica carinata HOM05D005371 ORTHO05D006863 1.6e-13 80.5 79 57.0
C05p61030 Brassica napus HOM05D005371 ORTHO05D006863 1.6e-13 80.5 79 57.0
BolC5t34759H Brassica oleracea HOM05D005371 ORTHO05D006863 1.6e-13 80.5 79 57.0
VMungo0540G1614 Vigna mungo HOM05D000137 ORTHO05D000503 1.6e-13 80.5 88 46.6
Migut.N00142 Erythranthe guttata HOM05D005371 ORTHO05D006863 2.0e-13 80.1 80 51.2
SGA_v2.0_scaffold107G30774 Striga asiatica HOM05D005371 ORTHO05D006863 3.5e-13 79.3 55 63.6
A05p41790 Brassica napus HOM05D005371 ORTHO05D006863 4.5e-13 79.0 79 53.2
BraA05t22898Z Brassica rapa HOM05D005371 ORTHO05D006863 4.5e-13 79.0 79 55.7
Glyma.15G102400 Glycine max HOM05D005371 ORTHO05D006863 4.5e-13 79.0 97 42.3
Haze_00980 Corylus avellana HOM05D005371 ORTHO05D006863 5.9e-13 78.6 55 67.3
Haze_00986 Corylus avellana HOM05D005371 ORTHO05D006863 5.9e-13 78.6 55 67.3
Haze_00989 Corylus avellana HOM05D005371 ORTHO05D006863 5.9e-13 78.6 55 67.3
Medtr2g021320 Medicago truncatula HOM05D005371 ORTHO05D006863 5.9e-13 78.6 54 64.8
Cfa015560 Carpinus fangiana HOM05D005371 ORTHO05D006863 7.8e-13 78.2 55 67.3
Oeu023656.1 Olea europaea HOM05D005371 ORTHO05D006863 7.8e-13 78.2 78 52.6
Carub.0003s0564 Capsella rubella HOM05D005371 ORTHO05D006863 1.0e-12 77.8 78 52.6
Gohir.D10G151100 Gossypium hirsutum HOM05D005371 ORTHO05D006863 1.0e-12 77.8 78 51.3
MD12G1097700 Malus domestica HOM05D005371 ORTHO05D006863 1.0e-12 77.8 76 53.9
MELO3C006574.2 Cucumis melo HOM05D005371 ORTHO05D006863 1.3e-12 77.4 55 67.3
Aa31sc1413G10 Aethionema arabicum HOM05D005371 ORTHO05D006863 2.3e-12 76.6 85 47.1
AagrBONN_evm.TU.Sc2ySwM_117.1044 Anthoceros agrestis HOM05D005371 ORTHO05D006863 2.9e-12 76.3 97 42.3
SMO347G0347 Selaginella moellendorffii HOM05D005371 ORTHO05D006863 2.9e-12 76.3 80 51.2
Mapoly0103s0074 Marchantia polymorpha HOM05D005371 ORTHO05D006863 5.0e-12 75.5 80 51.2
Aqoxy1G02374 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.9e-11 73.6 55 56.4
CsaV3_7G008570 Cucumis sativus L. HOM05D005371 ORTHO05D006863 7.3e-11 71.6 76 48.7
Pp3c7_19190 Physcomitrium patens HOM05D005371 ORTHO05D006863 1.2e-10 70.9 80 45.0
CBR_g11013 Chara braunii HOM05D005371 ORTHO05D006863 2.1e-10 70.1 87 41.4
Aqoxy1G00527 Aquilegia oxysepala HOM05D005371 ORTHO05D077946 2.8e-10 69.7 43 81.4
CBR_g4816 Chara braunii HOM05D005371 ORTHO05D006863 1.2e-08 64.3 88 39.8
PRCOL_00006380 Prasinoderma coloniale HOM05D005371 ORTHO05D006863 3.4e-08 62.8 72 40.3
HPP92_028178 Vanilla planifolia HOM05D005371 ORTHO05D006863 7.5e-08 61.6 45 66.7
Cre02.g084950 Chlamydomonas reinhardtii HOM05D005371 ORTHO05D006863 2.9e-07 59.7 86 40.7
TAR362G1313 Trochodendron aralioides HOM05D005371 ORTHO05D006863 6.4e-07 58.5 84 41.7
FvH4_4g06602 Fragaria vesca HOM05D009322 ORTHO05D010713 8.3e-07 58.2 70 40.0
SHI14601 Sapria himalayana HOM05D000024 ORTHO05D000006 8.3e-07 58.2 84 32.1
MCO11G301 Micromonas commoda HOM05D005371 ORTHO05D006863 1.1e-06 57.8 78 43.6
SHI35878 Sapria himalayana HOM05D000024 ORTHO05D000006 3.2e-06 56.2 84 32.1
SHI46014 Sapria himalayana HOM05D000003 ORTHO05D000004 3.2e-06 56.2 84 32.1
SHI55174 Sapria himalayana HOM05D000024 ORTHO05D000006 3.2e-06 56.2 84 32.1
CANSAT11G1107 Cannabis sativa HOM05D000003 ORTHO05D009135 4.1e-06 55.8 117 28.2
Dinv44470 Davidia involucrata HOM05D005371 ORTHO05D006863 4.1e-06 55.8 31 77.4
SHI49304 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-06 55.8 84 32.1
SHI34262 Sapria himalayana HOM05D000003 ORTHO05D000006 5.4e-06 55.5 84 32.1
SHI30688 Sapria himalayana HOM05D000024 ORTHO05D000006 7.0e-06 55.1 84 31.0
SHI33426 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-06 54.7 84 32.1
TAR584G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 9.2e-06 54.7 89 32.6


User provided reference genes

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