Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02231 Aquilegia oxysepala HOM05D001091 ORTHO05D001020 1.6e-114 416.0 194 100.0
Aqoxy1G03632 Aquilegia oxysepala HOM05D001091 ORTHO05D001020 8.4e-23 111.3 107 51.4
TAR626G0838 Trochodendron aralioides HOM05D001091 ORTHO05D001020 4.3e-19 99.0 108 45.4
TAR624G1242 Trochodendron aralioides HOM05D001091 ORTHO05D001020 2.1e-18 96.7 106 49.1
Potri.016G031900 Populus trichocarpa HOM05D001091 ORTHO05D001020 3.6e-18 95.9 104 42.3
GSVIVG01001899001 Vitis vinifera HOM05D001091 ORTHO05D001020 2.4e-17 93.2 105 46.7
Sabra16G0035100 Salix brachista HOM05D001091 ORTHO05D001020 4.0e-17 92.4 104 40.4
Potri.006G033800 Populus trichocarpa HOM05D001091 ORTHO05D001020 1.2e-16 90.9 104 40.4
Solyc09g019970.3 Solanum lycopersicum HOM05D001091 ORTHO05D001020 1.2e-16 90.9 104 44.2
Sopen09g012740 Solanum pennellii HOM05D001091 ORTHO05D001020 1.2e-16 90.9 104 45.2
Nn1g07098 Nelumbo nucifera HOM05D001091 ORTHO05D001020 1.5e-16 90.5 110 40.9
Sabra06G0022400 Salix brachista HOM05D001091 ORTHO05D001020 1.5e-16 90.5 102 40.2
CSS0048249 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 2.0e-16 90.1 105 43.8
CANSAT64G0657 Cannabis sativa HOM05D001091 ORTHO05D001020 2.0e-16 90.1 106 41.5
Cpa.g.sc92.64 Carica papaya HOM05D001091 ORTHO05D001020 2.0e-16 90.1 108 41.7
ClCG03G002350 Citrullus lanatus HOM05D001091 ORTHO05D001020 2.6e-16 89.7 107 39.3
Hma1.2p1_0161F.1_g071810 Hydrangea macrophylla HOM05D001091 ORTHO05D001020 3.4e-16 89.4 105 43.8
QL07p013120 Quercus lobata HOM05D001091 ORTHO05D001020 3.4e-16 89.4 108 40.7
CiPaw.01G003800 Carya illinoinensis HOM05D001091 ORTHO05D001020 4.4e-16 89.0 106 40.6
Actinidia11652 Actinidia chinensis HOM05D001091 ORTHO05D001020 5.8e-16 88.6 105 41.9
Actinidia23134 Actinidia chinensis HOM05D001091 ORTHO05D001020 5.8e-16 88.6 105 41.9
CDE06G2801 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 5.8e-16 88.6 107 39.3
Lj1C107G3 Lonicera japonica HOM05D001091 ORTHO05D001020 7.6e-16 88.2 105 43.8
MELO3C005015.2 Cucumis melo HOM05D001091 ORTHO05D001020 9.9e-16 87.8 108 39.8
PSO210G5535 Papaver somniferum HOM05D001091 ORTHO05D001020 9.9e-16 87.8 107 40.2
Nitab4.5_0010253g0020 Nicotiana tabacum HOM05D001091 ORTHO05D001020 1.7e-15 87.0 104 45.2
Prupe.7G027100 Prunus persica HOM05D001091 ORTHO05D001020 1.7e-15 87.0 106 39.6
TWI77G0388 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 1.7e-15 87.0 108 39.8
CAN.G253.7 Capsicum annuum HOM05D001091 ORTHO05D001020 2.2e-15 86.7 104 43.3
Nitab4.5_0001015g0060 Nicotiana tabacum HOM05D001091 ORTHO05D001020 2.2e-15 86.7 105 44.8
CsaV3_1G013030 Cucumis sativus L. HOM05D001091 ORTHO05D001020 2.9e-15 86.3 108 38.9
Lj1g0000533 Lotus japonicus HOM05D001091 ORTHO05D001020 2.9e-15 86.3 108 38.9
Glyma.19G126500 Glycine max HOM05D001091 ORTHO05D001020 3.8e-15 85.9 108 38.9
MD17G1207100 Malus domestica HOM05D001091 ORTHO05D001020 3.8e-15 85.9 108 39.8
Peaxi162Scf00424g00813 Petunia axillaris HOM05D001091 ORTHO05D001020 3.8e-15 85.9 111 43.2
Oeu020441.2 Olea europaea HOM05D001091 ORTHO05D001020 6.4e-15 85.1 105 41.0
MSTRG.17949 Avicennia marina HOM05D001091 ORTHO05D001020 8.4e-15 84.7 105 42.9
PSO832G0993 Papaver somniferum HOM05D001091 ORTHO05D001020 8.4e-15 84.7 107 39.3
Rhsim13G0055800 Rhododendron simsii HOM05D001091 ORTHO05D001020 8.4e-15 84.7 105 41.9
FvH4_1g29170 Fragaria vesca HOM05D001091 ORTHO05D001020 1.1e-14 84.3 91 40.7
FAN19G0140 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.1e-14 84.3 91 40.7
FAN26G0999 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.1e-14 84.3 81 44.4
Os11g0473200 Oryza sativa ssp. japonica HOM05D001091 ORTHO05D001020 1.4e-14 84.0 104 40.4
Ah.14g086120 Amaranthus hybridus HOM05D001091 ORTHO05D001020 1.9e-14 83.6 105 40.0
Haze_20268 Corylus avellana HOM05D001091 ORTHO05D001020 1.9e-14 83.6 95 40.0
Glyma.03G122400 Glycine max HOM05D001091 ORTHO05D001020 1.9e-14 83.6 108 38.9
Aa31LG3G1110 Aethionema arabicum HOM05D001091 ORTHO05D001020 2.4e-14 83.2 108 40.7
Phvul.001G118800 Phaseolus vulgaris HOM05D001091 ORTHO05D001020 2.4e-14 83.2 107 39.3
PGR042G2897 Punica granatum HOM05D001091 ORTHO05D001020 2.4e-14 83.2 106 38.7
FAN28G2885 Fragaria x ananassa HOM05D001091 ORTHO05D001020 3.2e-14 82.8 91 39.6
Manes.06G031201 Manihot esculenta HOM05D001091 ORTHO05D001020 3.2e-14 82.8 106 38.7
Atru.chr1.1293 Acer truncatum HOM05D001091 ORTHO05D001020 5.4e-14 82.0 107 39.3
FAN23G0114 Fragaria x ananassa HOM05D001091 ORTHO05D001020 5.4e-14 82.0 91 39.6
THA.LOC104803230 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 5.4e-14 82.0 108 39.8
A04p31280 Brassica napus HOM05D001091 ORTHO05D001020 7.1e-14 81.6 108 39.8
C04p68670 Brassica napus HOM05D001091 ORTHO05D001020 7.1e-14 81.6 108 39.8
BolC4t28373H Brassica oleracea HOM05D001091 ORTHO05D001020 7.1e-14 81.6 108 39.8
BraA04t18585Z Brassica rapa HOM05D001091 ORTHO05D001020 7.1e-14 81.6 108 39.8
Eucgr.A02196 Eucalyptus grandis HOM05D001091 ORTHO05D001020 7.1e-14 81.6 108 38.0
Hund17702 Selenicereus undatus HOM05D001091 ORTHO05D001020 7.1e-14 81.6 122 35.2
CDE08G1529 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 9.3e-14 81.3 94 40.4
arahy.Tifrunner.gnm1.ann1.M8EB5R Arachis hypogaea HOM05D001091 ORTHO05D001020 1.2e-13 80.9 108 37.0
arahy.Tifrunner.gnm1.ann1.T35U2Z Arachis hypogaea HOM05D001091 ORTHO05D001020 1.2e-13 80.9 108 37.0
Lalb_Chr22g0357871 Lupinus albus HOM05D001091 ORTHO05D001020 1.2e-13 80.9 106 38.7
vmacro02847 Vaccinium macrocarpon HOM05D001091 ORTHO05D001020 2.1e-13 80.1 96 41.7
VMungo1383G0555 Vigna mungo HOM05D001091 ORTHO05D001020 2.7e-13 79.7 136 34.6
Medtr7g088760 Medicago truncatula HOM05D001091 ORTHO05D001020 3.5e-13 79.3 108 36.1
Sp4g23240 Schrenkiella parvula HOM05D001091 ORTHO05D001020 3.5e-13 79.3 108 39.8
BcaC02g12861 Brassica carinata HOM05D001091 ORTHO05D001020 4.6e-13 79.0 108 38.0
AT2G40930 Arabidopsis thaliana HOM05D001091 ORTHO05D001020 6.0e-13 78.6 108 38.9
Carub.0004s2323 Capsella rubella HOM05D001091 ORTHO05D001020 6.0e-13 78.6 108 38.9
CARHR136040 Cardamine hirsuta HOM05D001091 ORTHO05D001020 6.0e-13 78.6 108 38.9
Psat3g081680 Pisum sativum HOM05D001091 ORTHO05D001020 6.0e-13 78.6 108 35.2
AL4G38890 Arabidopsis lyrata HOM05D001091 ORTHO05D001020 7.8e-13 78.2 108 38.9
Thhalv10016401m.g Eutrema salsugineum HOM05D001091 ORTHO05D001020 1.0e-12 77.8 108 38.9
SEGI_01669 Sequoiadendron giganteum HOM05D001091 ORTHO05D001020 1.0e-12 77.8 109 38.5
Ciclev10013795m.g Citrus clementina HOM05D001091 ORTHO05D001020 1.3e-12 77.4 108 38.9
Cc01_g15770 Coffea canephora HOM05D001091 ORTHO05D001020 1.7e-12 77.0 107 38.3
Oeu030357.1 Olea europaea HOM05D001091 ORTHO05D001020 8.7e-12 74.7 104 37.5
Migut.N00688 Erythranthe guttata HOM05D001091 ORTHO05D001020 1.1e-11 74.3 105 39.0
SalBow2G0137 Salvia bowleyana HOM05D001091 ORTHO05D001020 1.1e-11 74.3 105 41.0
SHI24551 Sapria himalayana HOM05D001091 ORTHO05D001020 1.1e-11 74.3 91 36.3
EL10Ac1g01773 Beta vulgaris HOM05D001091 ORTHO05D001020 1.5e-11 73.9 105 39.0
ATR0609G013 Amborella trichopoda HOM05D001091 ORTHO05D001020 1.9e-11 73.6 102 36.3
RcHm_v2.0_Chr3g0494551 Rosa chinensis HOM05D001091 ORTHO05D001020 2.5e-11 73.2 102 38.2
Thecc.10G130300 Theobroma cacao HOM05D001091 ORTHO05D001020 3.3e-11 72.8 113 36.3
SGA_v2.0_scaffold77G25324 Striga asiatica HOM05D001091 ORTHO05D001020 5.6e-11 72.0 95 41.1
ATR0304G032 Amborella trichopoda HOM05D001091 ORTHO05D001020 9.6e-11 71.2 107 35.5
AUR62002661 Chenopodium quinoa HOM05D001091 ORTHO05D001020 9.6e-11 71.2 105 39.0
AUR62034029 Chenopodium quinoa HOM05D001091 ORTHO05D001020 9.6e-11 71.2 105 39.0
Gohir.D10G201101 Gossypium hirsutum HOM05D001091 ORTHO05D001020 1.6e-10 70.5 112 37.5
Gorai.011G225800 Gossypium raimondii HOM05D001091 ORTHO05D001020 1.6e-10 70.5 112 37.5
Duzib114G0152 Durio zibethinus HOM05D001091 ORTHO05D001020 3.6e-10 69.3 110 34.5
Lsat_1_v5_gn_8_98701 Lactuca sativa HOM05D001091 ORTHO05D001020 3.6e-10 69.3 122 33.6
Gohir.A10G193900 Gossypium hirsutum HOM05D001091 ORTHO05D001020 4.8e-10 68.9 112 36.6
COL.COLO4_07152 Corchorus olitorius HOM05D001091 ORTHO05D001020 6.2e-10 68.6 112 33.9
Sed0006075 Sechium edule HOM05D001091 ORTHO05D001020 6.9e-09 65.1 119 33.6
Lsat_1_v5_gn_9_15821 Lactuca sativa HOM05D001091 ORTHO05D001020 2.0e-08 63.5 103 35.9
DCAR_018602 Daucus carota HOM05D001091 ORTHO05D001020 5.8e-08 62.0 96 37.5
ECA247G1442 Erigeron canadensis HOM05D001091 ORTHO05D001020 7.6e-08 61.6 105 32.4
HanXRQChr08g0231261 Helianthus annuus HOM05D001091 ORTHO05D001020 2.9e-07 59.7 96 33.3
unitig_0.g1155 Utricularia gibba HOM05D001091 ORTHO05D001020 1.4e-06 57.4 54 51.9
Nn3g18864 Nelumbo nucifera HOM05D001091 ORTHO05D001020 4.2e-06 55.8 104 37.5
DCAR_012711 Daucus carota HOM05D001091 ORTHO05D001020 5.4e-06 55.5 120 28.3
Nn1g00432 Nelumbo nucifera HOM05D001091 ORTHO05D001020 7.1e-06 55.1 105 32.4


User provided reference genes

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