Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 5.5e-58 227.6 134 100.0
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 7.3e-26 120.9 137 61.3
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 1.6e-25 119.8 135 50.4
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 3.6e-25 118.6 137 61.3
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 8.1e-25 117.5 135 48.1
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 8.1e-25 117.5 136 58.1
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 1.4e-24 116.7 136 60.3
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 2.3e-24 115.9 136 59.6
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 1.5e-23 113.2 135 58.5
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 2.0e-23 112.8 134 53.7
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 4.4e-23 111.7 135 59.3
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 4.4e-23 111.7 137 60.6
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 4.4e-23 111.7 136 60.3
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 9.8e-23 110.5 136 44.9
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 9.8e-23 110.5 136 47.8
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.3e-22 110.2 136 55.1
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 1.7e-22 109.8 136 49.3
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 2.2e-22 109.4 139 46.8
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.2e-22 109.4 136 45.6
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 2.9e-22 109.0 137 45.3
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 3.7e-22 108.6 136 48.5
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 8.3e-22 107.5 137 54.7
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.4e-21 105.9 136 46.3
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.4e-21 105.9 136 46.3
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 2.4e-21 105.9 135 53.3
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 4.1e-21 105.1 140 47.1
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 7.1e-21 104.4 137 44.5
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 1.2e-20 103.6 134 45.5
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.1e-20 102.8 136 47.1
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 2.7e-20 102.4 135 44.4
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 2.7e-20 102.4 135 45.9
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.7e-20 102.4 136 46.3
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.5e-20 102.1 136 48.5
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 3.5e-20 102.1 134 50.7
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 3.5e-20 102.1 137 49.6
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 3.5e-20 102.1 136 42.6
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 4.6e-20 101.7 136 56.6
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 7.8e-20 100.9 136 47.8
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 1.0e-19 100.5 135 41.5
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 1.0e-19 100.5 136 45.6
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.0e-19 100.5 135 54.8
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 1.3e-19 100.1 136 41.9
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.7e-19 99.8 134 44.8
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.3e-19 99.4 136 44.9
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 5.1e-19 98.2 136 41.2
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 6.6e-19 97.8 135 54.1
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 8.6e-19 97.4 134 41.8
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 1.1e-18 97.1 135 55.6
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.5e-18 96.7 115 58.3
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 3.3e-18 95.5 134 38.8
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 3.3e-18 95.5 144 39.6
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 9.5e-18 94.0 140 52.9
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 9.5e-18 94.0 147 38.1
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 9.5e-18 94.0 113 59.3
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 1.2e-17 93.6 138 51.4
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.2e-17 93.6 135 39.3
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 1.2e-17 93.6 147 51.0
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.6e-17 93.2 139 42.4
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 1.6e-17 93.2 139 46.8
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.6e-17 93.2 135 44.4
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.6e-17 93.2 136 41.9
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 2.1e-17 92.8 138 51.4
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 3.6e-17 92.0 112 43.8
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 4.7e-17 91.7 133 40.6
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 6.2e-17 91.3 136 43.4
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 8.1e-17 90.9 131 51.9
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 8.1e-17 90.9 138 50.0
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 1.1e-16 90.5 134 51.5
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.1e-16 90.5 89 50.6
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.1e-16 90.5 135 45.9
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.4e-16 90.1 131 53.4
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 1.4e-16 90.1 135 45.2
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.8e-16 89.7 133 56.4
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 3.1e-16 89.0 138 39.9
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 8.9e-16 87.4 134 39.6
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 8.9e-16 87.4 138 50.7
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-15 87.0 134 39.6
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 1.5e-15 86.7 134 51.5
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.5e-15 86.7 134 51.5
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.5e-15 86.7 135 47.4
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 2.0e-15 86.3 135 41.5
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 2.6e-15 85.9 136 39.0
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 5.8e-15 84.7 132 41.7
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 5.8e-15 84.7 86 47.7
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 7.6e-15 84.3 92 60.9
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.6e-15 84.3 134 50.7
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 7.6e-15 84.3 83 68.7
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 7.6e-15 84.3 146 37.7
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 9.9e-15 84.0 90 54.4
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 9.9e-15 84.0 90 54.4
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.3e-14 83.6 83 69.9
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 1.7e-14 83.2 135 45.9
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 2.9e-14 82.4 91 47.3
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 2.9e-14 82.4 136 42.6
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 3.7e-14 82.0 93 46.2
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 3.7e-14 82.0 139 37.4
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 3.7e-14 82.0 137 48.9
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 4.9e-14 81.6 91 62.6
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 4.9e-14 81.6 91 62.6
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 6.4e-14 81.3 136 41.2
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 6.4e-14 81.3 72 52.8
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 8.4e-14 80.9 140 37.1
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 8.4e-14 80.9 134 38.1
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 8.4e-14 80.9 137 38.7
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 8.4e-14 80.9 134 53.0
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.1e-13 80.5 91 62.6
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 1.1e-13 80.5 134 47.8
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.4e-13 80.1 97 51.5
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 1.9e-13 79.7 135 36.3
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.9e-13 79.7 75 58.7
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.9e-13 79.7 85 63.5
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 2.4e-13 79.3 138 47.1
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 3.2e-13 79.0 134 35.8
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 4.1e-13 78.6 136 54.4
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 5.4e-13 78.2 135 45.2
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 9.2e-13 77.4 138 46.4
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 9.2e-13 77.4 139 50.4
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 1.2e-12 77.0 140 46.4
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 1.2e-12 77.0 121 38.0
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 1.6e-12 76.6 112 45.5
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 2.1e-12 76.3 129 35.7
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 2.1e-12 76.3 138 44.2
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 2.7e-12 75.9 89 46.1
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 3.5e-12 75.5 123 46.3
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.5e-12 75.5 86 44.2
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 3.5e-12 75.5 136 48.5
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 3.5e-12 75.5 153 34.0
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 4.6e-12 75.1 139 39.6
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 7.8e-12 74.3 116 52.6
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 7.8e-12 74.3 137 47.4
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 7.8e-12 74.3 134 48.5
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 1.0e-11 73.9 138 46.4
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 1.0e-11 73.9 138 46.4
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 1.3e-11 73.6 141 39.7
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 3.9e-11 72.0 92 43.5
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.9e-10 69.7 97 41.2
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 2.5e-10 69.3 140 46.4
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 2.5e-10 69.3 107 38.3
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 3.3e-10 68.9 92 54.3
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 5.6e-10 68.2 145 35.2
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 5.6e-10 68.2 91 41.8
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 9.6e-10 67.4 80 41.2
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 9.6e-10 67.4 136 36.0
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 9.6e-10 67.4 69 43.5
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 1.2e-09 67.0 137 46.7
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 1.2e-09 67.0 123 43.1
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 1.2e-09 67.0 126 49.2
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 1.2e-09 67.0 132 43.2
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.6e-09 66.6 85 42.4
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 2.1e-09 66.2 134 44.0
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.1e-09 66.2 138 47.8
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 2.8e-09 65.9 92 55.4
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 2.8e-09 65.9 103 37.9
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 4.7e-09 65.1 137 45.3
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 4.7e-09 65.1 74 43.2
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 6.2e-09 64.7 110 34.5
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 8.1e-09 64.3 91 56.0
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 1.1e-08 63.9 68 45.6
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 1.1e-08 63.9 77 53.2
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.8e-08 63.2 136 39.0
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 2.4e-08 62.8 89 42.7
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 5.2e-08 61.6 84 59.5
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 5.2e-08 61.6 59 49.2
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 8.9e-08 60.8 119 34.5
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 8.9e-08 60.8 89 56.2
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 7.6e-07 57.8 93 51.6
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 1.3e-06 57.0 87 52.9
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.3e-06 57.0 87 52.9
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.3e-06 57.0 87 52.9
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 2.9e-06 55.8 75 40.0
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 3.8e-06 55.5 133 42.9


User provided reference genes

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