Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 4.9e-150 536.2 904 100.0
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 8.0e-52 209.9 250 48.0
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 3.1e-51 208.0 243 50.2
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 2.6e-50 204.9 239 47.3
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.4e-48 198.4 246 46.3
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 3.2e-48 198.0 244 48.0
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 4.1e-48 197.6 251 48.2
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 2.0e-47 195.3 225 50.2
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 2.7e-47 194.9 248 47.6
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 5.6e-45 187.2 232 47.0
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 5.6e-45 187.2 243 46.5
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 7.3e-45 186.8 232 47.0
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.6e-44 185.7 234 46.6
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.8e-44 184.9 237 47.3
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 2.8e-44 184.9 241 48.5
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 8.1e-44 183.3 243 45.7
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 1.8e-43 182.2 230 47.0
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.2e-42 179.5 229 48.0
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 2.0e-42 178.7 237 44.7
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 2.0e-42 178.7 229 46.3
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 4.4e-42 177.6 229 45.9
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 5.8e-42 177.2 230 45.2
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 5.8e-42 177.2 232 43.1
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 5.8e-42 177.2 250 44.0
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 7.5e-42 176.8 219 49.8
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 9.9e-42 176.4 236 45.3
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 1.3e-41 176.0 233 43.8
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.3e-41 176.0 230 45.2
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 1.3e-41 176.0 240 45.8
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.2e-41 175.3 245 44.1
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.2e-41 175.3 245 44.1
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 2.9e-41 174.9 253 42.3
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 2.9e-41 174.9 241 43.2
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 6.4e-41 173.7 230 44.8
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 8.3e-41 173.3 232 44.8
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.4e-40 172.6 257 41.6
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.9e-40 172.2 236 45.8
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 2.4e-40 171.8 262 43.9
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.6e-39 169.1 236 43.2
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.1e-39 168.7 238 41.2
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 7.8e-39 166.8 189 47.1
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.3e-38 166.0 251 42.6
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 8.6e-38 163.3 154 55.2
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 1.1e-37 162.9 235 41.3
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 2.5e-37 161.8 245 43.7
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 3.3e-37 161.4 244 42.2
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 4.3e-37 161.0 163 52.8
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 4.3e-37 161.0 227 44.9
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 5.6e-37 160.6 250 40.0
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 9.5e-37 159.8 261 42.9
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.2e-36 159.5 240 43.3
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.8e-35 155.6 206 48.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 2.4e-35 155.2 234 41.9
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 4.0e-35 154.5 163 49.1
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 6.8e-35 153.7 174 50.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 3.4e-34 151.4 162 50.6
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 5.8e-34 150.6 156 52.6
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 5.8e-34 150.6 256 38.7
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 9.9e-34 149.8 163 50.3
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.3e-33 149.4 163 47.9
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.2e-33 148.7 148 55.4
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 2.9e-33 148.3 153 53.6
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 4.9e-33 147.5 163 47.2
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 1.1e-32 146.4 156 48.7
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 4.1e-32 144.4 208 42.3
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 5.4e-32 144.1 154 48.7
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 7.1e-32 143.7 154 50.6
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 1.6e-31 142.5 221 43.4
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-31 141.7 158 50.0
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-31 141.7 158 50.0
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 4.6e-31 141.0 263 37.3
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.3e-30 139.4 177 46.9
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 2.8e-28 131.7 162 45.7
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 4.7e-28 131.0 128 57.0
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.1e-24 119.8 120 52.5
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 4.6e-23 114.4 126 44.4
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.5e-21 109.4 93 61.3
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 3.3e-21 108.2 129 48.1
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 2.0e-18 99.0 90 55.6
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.7e-17 95.9 93 54.8
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 6.4e-17 94.0 119 44.5
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 4.2e-16 91.3 167 34.7
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.5e-15 88.2 148 38.5
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 6.0e-15 87.4 104 47.1
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 3.9e-14 84.7 116 43.1
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 5.1e-14 84.3 104 45.2
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 2.1e-12 79.0 72 52.8
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 4.8e-12 77.8 104 54.8
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 3.4e-10 71.6 56 55.4
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 3.4e-10 71.6 70 48.6
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 1.3e-09 69.7 93 38.7
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.1e-08 66.6 129 38.8
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.9e-08 65.9 67 47.8
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 2.4e-08 65.5 140 40.0
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 4.2e-08 64.7 86 37.2
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 1.3e-06 59.7 170 24.7


User provided reference genes

Program Settings