Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 4.9e-188 661.0 333 100.0
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 8.2e-111 404.4 329 62.9
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 7.7e-109 397.9 328 63.1
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 6.1e-106 388.3 335 61.2
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 7.9e-106 387.9 327 63.3
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.1e-105 385.2 334 62.3
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 4.8e-103 378.6 328 60.1
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 6.3e-103 378.3 328 60.4
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 2.4e-102 376.3 326 61.3
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 7.0e-102 374.8 331 60.1
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.6e-101 372.9 322 62.1
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 3.8e-100 369.0 328 58.8
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 3.6e-98 362.5 329 60.5
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 6.1e-98 361.7 323 61.9
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 8.0e-98 361.3 327 57.8
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 3.0e-97 359.4 318 59.4
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 3.9e-97 359.0 328 61.3
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 2.0e-96 356.7 318 58.8
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 4.4e-96 355.5 295 63.7
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 9.7e-96 354.4 328 58.8
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 1.3e-95 354.0 329 57.1
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.7e-95 353.6 327 59.3
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.1e-94 350.9 256 68.8
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.4e-94 349.7 333 56.2
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.6e-93 347.1 329 55.0
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 5.9e-93 345.1 328 57.6
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.0e-92 344.4 330 56.7
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 1.3e-92 344.0 328 56.4
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 2.9e-92 342.8 330 55.5
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 2.9e-92 342.8 327 57.2
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 3.8e-92 342.4 328 56.4
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.5e-92 341.7 329 55.0
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 8.5e-92 341.3 330 55.2
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 8.5e-92 341.3 331 56.8
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 1.1e-91 340.9 329 54.4
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 1.9e-91 340.1 332 56.9
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 3.2e-91 339.3 324 54.3
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 5.5e-91 338.6 327 56.9
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 7.2e-91 338.2 331 57.1
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 1.6e-90 337.0 333 53.8
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 1.6e-90 337.0 329 53.8
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 2.1e-90 336.7 326 56.7
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 2.1e-90 336.7 328 54.9
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 3.6e-90 335.9 328 54.9
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 4.7e-90 335.5 303 61.1
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.1e-90 335.1 305 60.3
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 8.0e-90 334.7 324 55.2
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 8.0e-90 334.7 322 55.3
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.4e-89 334.0 325 57.5
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 2.3e-89 333.2 326 56.1
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 3.0e-89 332.8 325 58.2
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 4.0e-89 332.4 329 57.8
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 4.0e-89 332.4 331 54.1
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 8.8e-89 331.3 335 53.1
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.2e-88 330.9 303 60.7
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 1.5e-88 330.5 328 56.7
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 3.4e-88 329.3 337 54.9
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 4.4e-88 328.9 327 53.5
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 7.5e-88 328.2 331 54.1
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 9.7e-88 327.8 322 55.9
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 9.7e-88 327.8 330 52.4
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.7e-87 327.0 330 52.7
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 2.2e-87 326.6 314 56.4
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 2.2e-87 326.6 288 59.7
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 2.8e-87 326.2 322 52.5
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 3.7e-87 325.9 329 55.3
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.7e-87 325.9 331 53.2
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 3.7e-87 325.9 250 65.6
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 4.8e-87 325.5 324 54.0
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.3e-87 325.1 328 53.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 8.3e-87 324.7 328 52.7
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 1.1e-86 324.3 324 54.0
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.1e-86 324.3 322 55.6
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 1.1e-86 324.3 263 62.4
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 1.1e-86 324.3 329 54.7
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 1.4e-86 323.9 288 58.7
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 1.4e-86 323.9 323 55.1
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 1.4e-86 323.9 306 55.6
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.8e-86 323.6 331 53.8
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.4e-86 323.2 328 52.7
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 4.1e-86 322.4 324 54.0
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 4.1e-86 322.4 333 54.7
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 7.0e-86 321.6 328 53.7
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 7.0e-86 321.6 328 53.7
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 7.0e-86 321.6 330 54.2
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 9.1e-86 321.2 329 52.6
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 1.6e-85 320.5 326 52.8
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 1.6e-85 320.5 326 52.8
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 1.6e-85 320.5 320 55.6
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.6e-85 320.5 322 55.3
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.0e-85 320.1 323 55.7
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 3.5e-85 319.3 326 53.1
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 5.9e-85 318.5 338 52.1
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 7.7e-85 318.2 324 52.8
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 7.7e-85 318.2 324 53.1
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 1.3e-84 317.4 324 53.1
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.2e-84 316.6 248 65.3
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.2e-84 316.6 248 65.3
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 5.0e-84 315.5 322 55.0
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 8.5e-84 314.7 322 54.7
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 8.5e-84 314.7 337 51.6
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 3.2e-83 312.8 322 54.0
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 5.5e-83 312.0 334 52.4
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 9.4e-83 311.2 322 53.7
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 1.6e-82 310.5 326 51.8
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 2.7e-82 309.7 298 56.0
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 3.6e-82 309.3 252 63.1
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 6.1e-82 308.5 291 57.7
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 8.0e-82 308.1 332 52.4
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 1.0e-81 307.8 270 58.5
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 6.8e-81 305.1 343 51.9
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 6.8e-81 305.1 328 51.2
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 5.7e-80 302.0 298 53.4
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 9.8e-80 301.2 340 50.6
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 9.8e-80 301.2 306 51.6
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 1.7e-79 300.4 287 54.4
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 8.3e-79 298.1 269 56.9
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 8.3e-79 298.1 250 61.6
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.1e-78 297.7 336 48.8
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 1.1e-78 297.7 260 57.7
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 1.4e-78 297.4 260 57.3
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 1.6e-77 293.9 328 51.8
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 2.0e-77 293.5 353 48.7
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 3.5e-77 292.7 331 48.0
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 4.5e-77 292.4 284 50.7
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 5.9e-77 292.0 294 51.7
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 5.9e-77 292.0 328 48.5
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 7.7e-77 291.6 340 48.2
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 2.3e-76 290.0 331 48.0
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 5.0e-76 288.9 324 49.1
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 8.6e-76 288.1 259 56.8
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 1.9e-75 287.0 279 58.1
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 4.2e-75 285.8 331 47.7
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 5.5e-75 285.4 329 48.3
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.2e-74 284.3 296 51.4
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 2.1e-74 283.5 322 47.8
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 2.8e-74 283.1 328 47.9
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 3.6e-74 282.7 263 54.8
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 4.7e-74 282.3 257 56.4
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 6.1e-74 282.0 328 47.9
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.0e-73 281.2 326 46.9
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.0e-73 281.2 321 49.5
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 9.8e-72 274.6 317 47.9
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 1.7e-71 273.9 348 47.7
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 6.3e-71 271.9 252 56.3
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 2.4e-70 270.0 278 53.6
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 9.2e-70 268.1 258 55.4
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 3.5e-69 266.2 255 54.1
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 1.9e-67 260.4 332 44.6
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 1.6e-66 257.3 266 54.5
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 6.1e-66 255.4 253 53.4
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 5.4e-62 242.3 237 53.6
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 2.7e-61 240.0 156 73.7
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.5e-59 234.2 161 68.9
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 4.1e-54 216.1 218 49.5
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.7e-52 210.7 155 71.0
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 5.6e-51 205.7 154 65.6
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 2.0e-48 197.2 239 48.1
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 1.7e-47 194.1 236 45.3
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 1.7e-47 194.1 286 45.1
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 2.9e-47 193.4 236 47.0
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 6.8e-41 172.2 217 47.0
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 2.9e-39 166.8 250 38.0
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 8.4e-39 165.2 206 45.1
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 4.8e-34 149.4 210 41.0
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 1.8e-33 147.5 236 41.5
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 3.8e-31 139.8 107 70.1
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 2.1e-29 134.0 90 73.3
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 1.7e-28 131.0 91 69.2
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.4e-25 121.3 76 75.0
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 4.2e-22 109.8 75 66.7
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 5.4e-22 109.4 81 65.4
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 1.1e-19 101.7 81 59.3
Psat0s806g0040 Pisum sativum HOM05D003948 ORTHO05D004610 4.5e-16 89.7 118 42.4
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.5e-11 74.7 56 62.5


User provided reference genes

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