Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.4e-116 422.2 210 100.0
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 3.7e-32 142.5 116 55.2
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 1.8e-31 140.2 167 50.3
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 3.1e-31 139.4 113 61.9
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 9.0e-31 137.9 188 46.3
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 9.0e-31 137.9 134 54.5
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 3.4e-30 136.0 148 49.3
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.1e-28 131.0 148 50.7
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.1e-28 131.0 144 51.4
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.9e-28 130.2 131 52.7
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.9e-28 130.2 125 60.0
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 3.2e-28 129.4 141 47.5
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.2e-28 129.4 151 49.7
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 7.1e-28 128.3 138 50.0
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 9.3e-28 127.9 174 44.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.6e-27 127.1 128 57.0
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.6e-27 127.1 166 45.2
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 3.5e-27 125.9 162 44.4
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 3.5e-27 125.9 190 44.7
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 4.6e-27 125.6 158 47.5
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 7.9e-27 124.8 187 44.4
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.8e-26 123.6 154 49.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 3.0e-26 122.9 125 53.6
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 3.0e-26 122.9 125 54.4
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 5.1e-26 122.1 147 51.7
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 6.7e-26 121.7 178 48.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.5e-25 119.8 187 43.3
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.3e-24 117.5 117 52.1
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 1.6e-24 117.1 149 51.0
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.6e-24 117.1 125 52.0
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.6e-24 117.1 114 52.6
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.2e-24 116.7 184 44.0
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 2.2e-24 116.7 135 48.1
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 2.2e-24 116.7 133 46.6
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 2.8e-24 116.3 124 50.0
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 3.7e-24 115.9 148 45.9
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 6.3e-24 115.2 183 44.8
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 6.3e-24 115.2 154 44.2
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 8.2e-24 114.8 164 43.3
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 8.2e-24 114.8 119 47.9
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-23 114.4 151 45.7
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 1.1e-23 114.4 132 47.7
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.1e-23 114.4 158 41.8
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.8e-23 113.6 117 47.0
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 3.1e-23 112.8 182 42.9
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 4.1e-23 112.5 117 47.0
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 4.1e-23 112.5 155 46.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 5.3e-23 112.1 167 45.5
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 6.9e-23 111.7 145 46.9
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.9e-23 111.7 120 50.8
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 9.0e-23 111.3 156 44.2
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 4.5e-22 109.0 145 43.4
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 4.5e-22 109.0 164 43.3
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 5.9e-22 108.6 187 39.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 1.0e-21 107.8 152 42.8
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.3e-21 107.5 152 42.8
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 2.9e-21 106.3 167 41.9
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 3.8e-21 105.9 145 45.5
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 3.8e-21 105.9 145 45.5
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 3.8e-21 105.9 95 60.0
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 5.0e-21 105.5 113 46.9
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 8.5e-21 104.8 145 45.5
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 8.5e-21 104.8 145 45.5
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.4e-20 104.0 200 38.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.9e-20 103.6 90 58.9
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.6e-19 100.5 168 41.1
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 2.1e-19 100.1 154 42.2
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 6.1e-19 98.6 128 44.5
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 1.8e-18 97.1 128 43.0
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 1.1e-17 94.4 115 49.6
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-17 94.4 87 55.2
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 3.3e-17 92.8 163 39.3
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 3.7e-16 89.4 141 44.0
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 4.8e-16 89.0 145 43.4
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 4.8e-16 89.0 134 37.3
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.4e-15 87.4 114 43.0
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.4e-15 86.7 68 55.9
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 2.4e-15 86.7 120 45.0
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.4e-15 86.7 165 33.9
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 9.1e-15 84.7 160 38.1
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.2e-14 84.3 116 40.5
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 2.6e-14 83.2 75 52.0
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 2.6e-14 83.2 222 31.1
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 4.5e-14 82.4 153 38.6
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.9e-13 79.7 94 48.9
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 8.5e-13 78.2 161 37.9
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 3.2e-12 76.3 81 45.7
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.1e-09 67.8 63 50.8
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.0e-09 67.0 68 54.4
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 4.8e-08 62.4 145 35.9
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 7.7e-06 55.1 113 39.8


User provided reference genes

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