Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01971 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 7.0e-40 166.8 81 100.0
Aqoxy1G00724 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 1.7e-38 162.2 81 96.3
CSS0049041 Camellia sinensis var. sinensis HOM05D007025 ORTHO05D008862 1.7e-30 135.6 81 74.1
TAR374G1462 Trochodendron aralioides HOM05D007025 ORTHO05D008862 1.7e-30 135.6 81 75.3
Prupe.6G079900 Prunus persica HOM05D007025 ORTHO05D008862 6.6e-30 133.7 81 75.3
Rhsim09G0044100 Rhododendron simsii HOM05D007025 ORTHO05D008862 1.1e-29 132.9 81 74.1
ClCG08G009640 Citrullus lanatus HOM05D007025 ORTHO05D008862 1.9e-29 132.1 81 72.8
Sed0024062 Sechium edule HOM05D007025 ORTHO05D008862 1.9e-29 132.1 81 74.1
vmacro00530 Vaccinium macrocarpon HOM05D007025 ORTHO05D008862 3.3e-29 131.3 81 74.1
PGR102G0249 Punica granatum HOM05D007025 ORTHO05D008862 7.3e-29 130.2 81 72.8
Thecc.09G323800 Theobroma cacao HOM05D007025 ORTHO05D008862 7.3e-29 130.2 81 70.4
CsaV3_6G031770 Cucumis sativus L. HOM05D007025 ORTHO05D008862 1.6e-28 129.0 81 71.6
CiPaw.09G091100 Carya illinoinensis HOM05D007025 ORTHO05D008862 2.1e-28 128.6 81 72.8
arahy.Tifrunner.gnm1.ann1.UND1EB Arachis hypogaea HOM05D007025 ORTHO05D008862 2.8e-28 128.3 81 72.8
arahy.Tifrunner.gnm1.ann1.XVFR0N Arachis hypogaea HOM05D007025 ORTHO05D008862 6.1e-28 127.1 81 71.6
CiPaw.13G095900 Carya illinoinensis HOM05D007025 ORTHO05D008862 1.0e-27 126.3 81 71.6
COL.COLO4_20470 Corchorus olitorius HOM05D007025 ORTHO05D008862 1.0e-27 126.3 81 69.1
QL06p002232 Quercus lobata HOM05D007025 ORTHO05D008862 1.0e-27 126.3 80 71.2
RcHm_v2.0_Chr5g0006711 Rosa chinensis HOM05D007025 ORTHO05D008862 1.0e-27 126.3 81 75.3
RcHm_v2.0_Chr5g0063941 Rosa chinensis HOM05D007025 ORTHO05D008862 1.0e-27 126.3 81 75.3
Hma1.2p1_1888F.1_g306550 Hydrangea macrophylla HOM05D007025 ORTHO05D008862 1.4e-27 125.9 81 69.1
MELO3C026555.2 Cucumis melo HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 69.1
Eucgr.J02059 Eucalyptus grandis HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 70.4
FvH4_3g35770 Fragaria vesca HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 75.3
FAN11G3513 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 75.3
FAN16G3493 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 75.3
FAN25G2181 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 75.3
Gohir.D03G127100 Gossypium hirsutum HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 70.4
Gorai.003G133500 Gossypium raimondii HOM05D007025 ORTHO05D008862 1.8e-27 125.6 81 70.4
CANSAT54G1063 Cannabis sativa HOM05D007025 ORTHO05D008862 2.3e-27 125.2 81 71.6
Nitab4.5_0004078g0030 Nicotiana tabacum HOM05D007025 ORTHO05D008862 2.3e-27 125.2 81 69.1
Solyc11g066070.2 Solanum lycopersicum HOM05D007025 ORTHO05D008862 2.3e-27 125.2 81 69.1
Sopen11g025810 Solanum pennellii HOM05D007025 ORTHO05D008862 2.3e-27 125.2 81 69.1
PGSC0003DMG400000442 Solanum tuberosum HOM05D007025 ORTHO05D008862 2.3e-27 125.2 81 69.1
Gohir.A03G041000 Gossypium hirsutum HOM05D007025 ORTHO05D008862 3.0e-27 124.8 81 69.1
Lsat_1_v5_gn_2_83821 Lactuca sativa HOM05D007025 ORTHO05D008862 3.0e-27 124.8 81 66.7
Nitab4.5_0001800g0060 Nicotiana tabacum HOM05D007025 ORTHO05D008862 3.0e-27 124.8 81 69.1
TWI79G0521 Tripterygium wilfordii HOM05D007025 ORTHO05D008862 3.0e-27 124.8 81 69.1
GSVIVG01024988001 Vitis vinifera HOM05D007025 ORTHO05D008862 3.0e-27 124.8 81 67.9
Ciclev10003169m.g Citrus clementina HOM05D007025 ORTHO05D008862 6.8e-27 123.6 81 70.4
Lsat_1_v5_gn_5_79400 Lactuca sativa HOM05D007025 ORTHO05D008862 6.8e-27 123.6 81 65.4
QL10p005425 Quercus lobata HOM05D007025 ORTHO05D008862 6.8e-27 123.6 80 70.0
CAN.G764.4 Capsicum annuum HOM05D007025 ORTHO05D008862 8.9e-27 123.2 81 67.9
Cc01_g12710 Coffea canephora HOM05D007025 ORTHO05D008862 1.2e-26 122.9 81 69.1
FAN21G1635 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.2e-26 122.9 81 74.1
Peaxi162Scf00406g00059 Petunia axillaris HOM05D007025 ORTHO05D008862 1.2e-26 122.9 81 66.7
unitig_749.g14331 Utricularia gibba HOM05D007025 ORTHO05D008862 1.2e-26 122.9 81 67.9
Glyma.05G134100 Glycine max HOM05D007025 ORTHO05D008862 1.5e-26 122.5 81 71.6
Phvul.002G188200 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 1.5e-26 122.5 81 71.6
ATR0800G159 Amborella trichopoda HOM05D007025 ORTHO05D008862 2.0e-26 122.1 79 72.2
CiPaw.14G069900 Carya illinoinensis HOM05D007025 ORTHO05D008862 2.0e-26 122.1 81 67.9
Duzib168G1407 Durio zibethinus HOM05D007025 ORTHO05D008862 2.0e-26 122.1 81 67.9
Lalb_Chr12g0209151 Lupinus albus HOM05D007025 ORTHO05D008862 2.6e-26 121.7 81 70.4
EL10Ac7g15997 Beta vulgaris HOM05D007025 ORTHO05D008862 4.4e-26 120.9 81 66.7
Glyma.08G088800 Glycine max HOM05D007025 ORTHO05D008862 4.4e-26 120.9 81 70.4
Medtr4g094750 Medicago truncatula HOM05D007025 ORTHO05D008862 4.4e-26 120.9 81 66.7
Nn5g26960 Nelumbo nucifera HOM05D007025 ORTHO05D008862 4.4e-26 120.9 82 69.5
Psat7g087480 Pisum sativum HOM05D007025 ORTHO05D008862 4.4e-26 120.9 81 66.7
Solyc06g076010.3 Solanum lycopersicum HOM05D007025 ORTHO05D008862 5.7e-26 120.6 81 67.9
Sopen06g032420 Solanum pennellii HOM05D007025 ORTHO05D008862 5.7e-26 120.6 81 67.9
Lalb_Chr12g0209181 Lupinus albus HOM05D007025 ORTHO05D008862 7.5e-26 120.2 81 69.1
Phvul.007G101100 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 2.2e-25 118.6 81 70.4
Haze_24077 Corylus avellana HOM05D007025 ORTHO05D008862 2.9e-25 118.2 80 66.2
ECA238G2407 Erigeron canadensis HOM05D007025 ORTHO05D008862 3.7e-25 117.9 81 61.7
SGA_v2.0_scaffold118G32439 Striga asiatica HOM05D007025 ORTHO05D008862 3.7e-25 117.9 82 69.5
PSO384G2653 Papaver somniferum HOM05D007025 ORTHO05D008862 4.9e-25 117.5 81 64.2
Cfa003375 Carpinus fangiana HOM05D007025 ORTHO05D008862 6.4e-25 117.1 81 65.4
Hund04979 Selenicereus undatus HOM05D007025 ORTHO05D008862 6.4e-25 117.1 81 65.4
Cpa.g.sc840.2 Carica papaya HOM05D007025 ORTHO05D008862 8.3e-25 116.7 81 64.2
Manes.04G033800 Manihot esculenta HOM05D007025 ORTHO05D008862 8.3e-25 116.7 81 63.0
TPR.G23830 Trifolium pratense HOM05D007025 ORTHO05D008862 2.4e-24 115.2 79 67.1
Migut.C01196 Erythranthe guttata HOM05D007025 ORTHO05D008862 4.1e-24 114.4 81 65.4
THA.LOC104810785 Tarenaya hassleriana HOM05D007025 ORTHO05D008862 4.1e-24 114.4 81 63.0
Carub.0001s3607 Capsella rubella HOM05D007025 ORTHO05D008862 7.0e-24 113.6 81 64.2
AL1G53430 Arabidopsis lyrata HOM05D007025 ORTHO05D008862 1.2e-23 112.8 81 64.2
AT1G47278 Arabidopsis thaliana HOM05D007025 ORTHO05D008862 1.2e-23 112.8 81 64.2
Aa31sc152G30 Aethionema arabicum HOM05D007025 ORTHO05D008862 1.6e-23 112.5 81 61.7
Lj1g0011371 Lotus japonicus HOM05D007025 ORTHO05D008862 2.0e-23 112.1 81 65.4
Lj4g0013158 Lotus japonicus HOM05D007025 ORTHO05D008862 2.0e-23 112.1 81 65.4
CARHR036850 Cardamine hirsuta HOM05D007025 ORTHO05D008862 3.5e-23 111.3 82 63.4
Atru.chr3.3859 Acer truncatum HOM05D007025 ORTHO05D008862 1.7e-22 109.0 81 60.5
Thhalv10011908m.g Eutrema salsugineum HOM05D007025 ORTHO05D008862 1.7e-22 109.0 81 64.2
Sp1g34420 Schrenkiella parvula HOM05D007025 ORTHO05D008862 2.3e-22 108.6 81 65.4
BcaB04g17532 Brassica carinata HOM05D007025 ORTHO05D008862 5.0e-22 107.5 81 64.2
BcaC07g37223 Brassica carinata HOM05D007025 ORTHO05D008862 6.6e-22 107.1 81 64.2
A08p05760 Brassica napus HOM05D007025 ORTHO05D008862 6.6e-22 107.1 81 64.2
C08p06430 Brassica napus HOM05D007025 ORTHO05D008862 6.6e-22 107.1 81 64.2
BraA08t32579Z Brassica rapa HOM05D007025 ORTHO05D008862 6.6e-22 107.1 81 64.2
CDE11G0504 Ceratophyllum demersum HOM05D007025 ORTHO05D008862 6.6e-22 107.1 81 61.7
SHI05954 Sapria himalayana HOM05D007025 ORTHO05D008862 1.9e-21 105.5 78 55.1
SalBow5G5439 Salvia bowleyana HOM05D007025 ORTHO05D008862 3.6e-20 101.3 76 63.2
Os03g0276700 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 8.0e-20 100.1 79 57.0
Potri.009G029400 Populus trichocarpa HOM05D007025 ORTHO05D008862 8.0e-20 100.1 81 55.6
Os08g0422300 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 5.2e-19 97.4 79 57.0
Lj1A680T12 Lonicera japonica HOM05D007025 ORTHO05D008862 1.7e-17 92.4 59 67.8
unitig_26.g9279 Utricularia gibba HOM05D007025 ORTHO05D008862 3.7e-17 91.3 57 70.2
FAN24G0628 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.4e-16 89.4 58 74.1
PGSC0003DMG400030317 Solanum tuberosum HOM05D007025 ORTHO05D008862 2.4e-16 88.6 57 64.9
MD11G1111500 Malus domestica HOM05D007025 ORTHO05D008862 3.2e-16 88.2 59 71.2
HanXRQChr14g0439311 Helianthus annuus HOM05D007025 ORTHO05D008862 2.0e-15 85.5 78 50.0
MBI05_g06554_MAGBIO Magnolia biondii HOM05D007025 ORTHO05D008862 3.5e-15 84.7 57 64.9
MD02G1271300 Malus domestica HOM05D007025 ORTHO05D008862 4.6e-15 84.3 59 66.1
Mapoly0032s0020 Marchantia polymorpha HOM05D007025 ORTHO05D008862 3.9e-14 81.3 80 50.0
BolC8t47490H Brassica oleracea HOM05D007025 ORTHO05D008862 3.3e-13 78.2 70 55.7
AagrBONN_evm.TU.Sc2ySwM_344.5329 Anthoceros agrestis HOM05D007025 ORTHO05D008862 1.1e-11 73.2 77 49.4
AUR62001808 Chenopodium quinoa HOM05D002150 ORTHO05D002191 1.1e-11 73.2 47 68.1
AUR62009594 Chenopodium quinoa HOM05D007025 ORTHO05D002191 1.1e-11 73.2 47 68.1
Pp3c21_6850 Physcomitrium patens HOM05D007025 ORTHO05D008862 2.3e-11 72.0 80 47.5
SGA_v2.0_scaffold24G10508 Striga asiatica HOM05D007025 ORTHO05D008862 9.9e-10 66.6 41 73.2
COL.COLO4_18491 Corchorus olitorius HOM05D007025 ORTHO05D008862 2.9e-09 65.1 77 46.8
SEGI_34612 Sequoiadendron giganteum HOM05D007025 ORTHO05D008862 2.4e-08 62.0 43 55.8
FvH4_2g11050 Fragaria vesca HOM05D007025 ORTHO05D008862 3.2e-08 61.6 37 70.3
MD02G1271100 Malus domestica HOM05D007025 ORTHO05D008862 1.0e-06 56.6 45 53.3


User provided reference genes

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