Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 2.8e-155 552.0 289 100.0
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 8.4e-128 460.7 287 80.5
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.7e-125 453.0 281 80.8
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 2.1e-123 446.0 287 78.4
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 8.1e-123 444.1 287 77.7
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 1.4e-122 443.4 287 78.0
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 1.8e-122 443.0 287 76.0
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.8e-122 443.0 287 77.4
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 3.1e-122 442.2 287 77.0
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 4.0e-122 441.8 287 77.0
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 9.0e-122 440.7 287 76.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 9.0e-122 440.7 287 76.7
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 7.6e-121 437.6 287 77.7
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 9.9e-121 437.2 287 77.4
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.7e-120 436.4 287 77.7
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 2.9e-120 435.6 287 77.0
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 4.9e-120 434.9 287 76.7
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 6.4e-120 434.5 287 76.7
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 1.4e-119 433.3 287 75.3
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 7.1e-119 431.0 287 74.2
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 1.2e-118 430.3 287 74.6
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 1.6e-118 429.9 287 75.3
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 1.6e-118 429.9 287 74.2
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 3.5e-118 428.7 287 76.0
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 3.5e-118 428.7 287 74.6
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 7.8e-118 427.6 287 75.3
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.7e-117 426.4 287 74.9
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 1.7e-117 426.4 287 74.6
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 2.3e-117 426.0 287 74.6
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 3.0e-117 425.6 287 74.2
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 1.1e-116 423.7 279 74.9
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 1.9e-116 422.9 287 72.5
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 4.3e-116 421.8 288 72.9
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 5.6e-116 421.4 287 73.5
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 4.8e-115 418.3 279 72.8
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.4e-114 416.8 287 72.5
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.4e-114 416.8 279 73.8
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.4e-114 416.8 279 73.8
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 3.1e-114 415.6 279 73.1
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 4.0e-114 415.2 279 71.3
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 4.0e-114 415.2 289 74.7
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 5.3e-114 414.8 248 82.3
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 6.9e-114 414.5 279 73.1
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 6.9e-114 414.5 279 73.1
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 6.9e-114 414.5 279 73.1
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 6.9e-114 414.5 287 73.9
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 9.0e-114 414.1 279 72.8
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 2.6e-113 412.5 282 73.4
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 2.6e-113 412.5 282 73.0
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 5.8e-113 411.4 279 73.1
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 7.6e-113 411.0 287 71.1
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 9.9e-113 410.6 279 72.4
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.3e-112 410.2 287 71.1
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.2e-112 409.5 281 72.2
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 3.8e-112 408.7 279 72.8
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 4.9e-112 408.3 287 71.4
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 1.4e-111 406.8 287 73.2
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.9e-111 406.4 283 72.4
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 1.9e-111 406.4 287 71.4
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 2.4e-111 406.0 287 70.4
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 3.2e-111 405.6 287 71.8
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 9.3e-111 404.1 287 71.1
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.3e-109 400.2 287 70.4
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 1.8e-109 399.8 287 69.3
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 2.5e-108 396.0 283 69.6
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 7.4e-108 394.4 282 69.5
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.3e-107 393.7 282 71.3
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.6e-107 393.3 287 69.3
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 2.8e-107 392.5 282 69.9
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 3.7e-107 392.1 287 67.6
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 6.2e-107 391.3 281 70.5
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 6.2e-107 391.3 281 69.8
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 1.1e-106 390.6 287 70.0
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 1.8e-106 389.8 284 69.0
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 2.4e-106 389.4 287 69.0
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 2.4e-106 389.4 281 69.0
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.1e-106 389.0 251 74.1
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 3.1e-106 389.0 321 63.2
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.2e-104 382.9 287 66.6
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.1e-103 380.6 263 72.6
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 2.7e-102 375.9 284 67.3
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 4.6e-102 375.2 278 66.2
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 1.3e-101 373.6 347 59.7
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 1.8e-101 373.2 282 68.8
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 6.7e-101 371.3 278 66.2
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.1e-100 370.5 287 64.8
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 1.3e-99 367.1 270 68.9
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 1.6e-99 366.7 287 64.5
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.8e-99 365.9 287 63.8
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 7.6e-97 357.8 425 49.4
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 3.8e-96 355.5 321 58.9
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 6.5e-96 354.8 248 70.6
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 1.9e-92 343.2 300 62.0
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 2.2e-91 339.7 235 74.5
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 4.8e-91 338.6 235 70.6
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.7e-88 330.1 283 58.7
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 1.4e-85 320.5 281 55.9
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 3.3e-84 315.8 287 58.9
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 5.7e-84 315.1 221 71.9
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 4.8e-83 312.0 283 55.5
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 5.0e-80 302.0 196 75.0
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 2.1e-78 296.6 200 73.0
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 5.7e-68 261.9 287 52.6
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 7.4e-68 261.5 243 58.8
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 2.2e-64 250.0 143 87.4
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 8.5e-56 221.5 165 63.6
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.0e-52 210.3 319 41.1
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 1.7e-51 207.2 281 43.4
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.5e-49 199.5 181 55.8
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.3e-40 170.2 181 53.0
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 4.3e-39 166.0 116 75.9
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 7.3e-39 165.2 130 60.0
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.8e-38 163.3 335 34.3
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 1.5e-36 157.5 117 71.8
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.9e-34 150.6 160 52.5
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.9e-29 131.7 189 41.8
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 9.8e-28 128.3 95 68.4
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.4e-26 124.4 95 61.1
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.1e-26 122.9 167 43.7
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 3.4e-12 76.6 50 74.0
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 6.4e-11 72.4 142 40.1
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.6e-09 67.8 58 55.2
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 4.6e-09 66.2 58 53.4
Actinidia20331 Actinidia chinensis HOM05D006393 ORTHO05D008088 4.3e-07 59.7 34 79.4


User provided reference genes

Program Settings