Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.9e-63 245.7 128 100.0
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.8e-61 239.2 128 96.9
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.4e-39 166.4 120 65.0
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 7.2e-39 164.1 120 63.3
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 3.3e-36 155.2 117 65.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 7.4e-36 154.1 116 67.2
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 1.7e-35 152.9 116 66.4
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 1.7e-35 152.9 116 65.5
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 1.7e-35 152.9 117 63.2
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.8e-34 149.4 121 60.3
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 5.3e-34 147.9 116 62.9
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 6.9e-34 147.5 121 59.5
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 9.1e-34 147.1 126 56.3
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 1.2e-33 146.7 116 61.2
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 2.0e-33 146.0 106 63.2
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 5.9e-33 144.4 116 60.3
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.0e-32 143.7 116 62.9
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 2.2e-32 142.5 116 60.3
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 2.2e-32 142.5 117 57.3
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 6.5e-32 141.0 116 58.6
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 1.9e-31 139.4 116 62.1
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 1.9e-31 139.4 116 62.1
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 2.5e-31 139.0 116 57.8
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 9.4e-31 137.1 126 55.6
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 1.2e-30 136.7 114 57.0
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 1.6e-30 136.3 116 57.8
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 1.6e-30 136.3 116 56.9
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 2.1e-30 136.0 116 56.9
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 2.7e-30 135.6 116 56.0
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 6.1e-30 134.4 116 56.9
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 6.1e-30 134.4 114 56.1
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 6.1e-30 134.4 117 55.6
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 1.0e-29 133.7 116 56.9
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 1.0e-29 133.7 116 56.9
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 1.4e-29 133.3 116 56.9
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.4e-29 133.3 116 56.9
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.4e-29 133.3 116 56.9
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.4e-29 133.3 94 66.0
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 1.4e-29 133.3 116 56.9
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.8e-29 132.9 117 53.8
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 2.3e-29 132.5 107 59.8
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 3.0e-29 132.1 116 56.0
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 3.0e-29 132.1 116 56.0
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 3.0e-29 132.1 116 56.0
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 3.0e-29 132.1 116 56.9
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 5.1e-29 131.3 116 56.0
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 5.1e-29 131.3 116 54.3
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 5.1e-29 131.3 116 53.4
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 5.1e-29 131.3 116 58.6
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 6.7e-29 131.0 117 57.3
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 6.7e-29 131.0 116 53.4
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 6.7e-29 131.0 116 54.3
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 2.0e-28 129.4 125 52.8
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 3.3e-28 128.6 116 54.3
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 3.3e-28 128.6 117 55.6
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 3.3e-28 128.6 112 56.2
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 5.7e-28 127.9 112 56.2
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.3e-27 126.7 116 53.4
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.3e-27 126.7 95 64.2
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 2.8e-27 125.6 116 53.4
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 3.7e-27 125.2 116 53.4
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 4.8e-27 124.8 125 53.6
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 1.8e-26 122.9 116 51.7
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 2.4e-26 122.5 118 59.3
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 2.4e-26 122.5 126 49.2
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.1e-26 122.1 116 52.6
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 5.3e-26 121.3 116 51.7
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 5.3e-26 121.3 116 51.7
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 5.3e-26 121.3 116 51.7
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 7.0e-26 120.9 127 51.2
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 7.0e-26 120.9 121 57.9
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 2.6e-25 119.0 104 53.8
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 6.5e-24 114.4 121 56.2
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 8.5e-24 114.0 93 59.1
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 8.5e-24 114.0 98 53.1
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.1e-23 113.6 121 51.2
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 4.2e-23 111.7 116 51.7
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 7.2e-23 110.9 103 53.4
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 2.1e-22 109.4 88 61.4
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 2.7e-22 109.0 103 50.5
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 3.0e-21 105.5 119 45.4
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.4e-18 96.7 90 50.0
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 2.4e-18 95.9 90 54.4
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 3.5e-17 92.0 85 54.1
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 2.9e-16 89.0 116 45.7
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 5.0e-16 88.2 118 35.6
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 6.5e-16 87.8 116 47.4
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 8.5e-16 87.4 101 46.5
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 8.0e-14 80.9 121 43.0
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 3.0e-13 79.0 90 46.7
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 3.7e-11 72.0 53 56.6
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 1.8e-10 69.7 86 37.2
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 1.9e-07 59.7 52 53.8


User provided reference genes

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