Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 1.1e-45 186.4 105 100.0
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 6.1e-28 127.5 105 70.5
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 3.7e-25 118.2 106 65.1
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 4.5e-23 111.3 106 64.2
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 1.0e-22 110.2 103 64.1
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 1.3e-22 109.8 82 72.0
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 1.3e-22 109.8 82 72.0
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 1.7e-22 109.4 95 65.3
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 6.5e-22 107.5 92 66.3
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 5.5e-21 104.4 93 64.5
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 9.4e-21 103.6 89 64.0
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 2.7e-20 102.1 94 61.7
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 3.6e-20 101.7 93 65.6
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 6.1e-20 100.9 93 61.3
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 1.0e-19 100.1 95 62.1
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 1.0e-19 100.1 77 66.2
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 1.4e-19 99.8 79 63.3
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 1.8e-19 99.4 93 60.2
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 2.3e-19 99.0 79 67.1
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 4.0e-19 98.2 94 59.6
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 6.8e-19 97.4 77 64.9
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 6.8e-19 97.4 101 55.4
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 6.8e-19 97.4 96 60.4
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 8.8e-19 97.1 94 61.7
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 1.5e-18 96.3 90 60.0
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 1.5e-18 96.3 98 61.2
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 2.0e-18 95.9 93 58.1
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 2.0e-18 95.9 77 62.3
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 2.0e-18 95.9 98 61.2
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 2.6e-18 95.5 78 64.1
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 2.6e-18 95.5 137 46.7
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 3.4e-18 95.1 99 54.5
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 4.4e-18 94.7 93 55.9
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 4.4e-18 94.7 93 55.9
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 4.4e-18 94.7 78 64.1
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 5.7e-18 94.4 102 52.0
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 9.8e-18 93.6 89 56.2
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 1.3e-17 93.2 89 55.1
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.3e-17 93.2 91 56.0
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 1.7e-17 92.8 94 52.1
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 2.8e-17 92.0 90 55.6
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 2.8e-17 92.0 77 61.0
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 3.7e-17 91.7 78 61.5
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 6.3e-17 90.9 91 59.3
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.1e-16 90.1 90 55.6
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 1.4e-16 89.7 103 47.6
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 1.8e-16 89.4 84 56.0
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 2.4e-16 89.0 99 51.5
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 2.4e-16 89.0 78 59.0
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 9.1e-16 87.0 90 57.8
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 9.1e-16 87.0 97 52.6
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 1.2e-15 86.7 95 53.7
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 2.7e-15 85.5 64 68.8
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 3.5e-15 85.1 66 62.1
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 4.5e-15 84.7 99 49.5
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 7.7e-15 84.0 99 48.5
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 1.0e-14 83.6 95 52.6
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 1.3e-14 83.2 63 69.8
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 1.3e-14 83.2 94 55.3
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 1.3e-14 83.2 99 47.5
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 1.7e-14 82.8 96 51.0
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 1.7e-14 82.8 90 54.4
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 2.2e-14 82.4 102 49.0
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 3.8e-14 81.6 93 54.8
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 3.8e-14 81.6 91 50.5
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 3.8e-14 81.6 80 56.2
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 5.0e-14 81.3 77 54.5
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 1.1e-13 80.1 77 54.5
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 1.5e-13 79.7 85 54.1
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 1.9e-13 79.3 66 57.6
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 1.9e-13 79.3 85 50.6
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 2.5e-13 79.0 70 62.9
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 2.5e-13 79.0 70 62.9
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 7.2e-13 77.4 80 57.5
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 9.5e-13 77.0 77 53.2
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 2.1e-12 75.9 57 66.7
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 2.7e-12 75.5 90 47.8
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 3.6e-12 75.1 65 61.5
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 4.7e-12 74.7 86 47.7
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 4.7e-12 74.7 86 47.7
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 1.8e-11 72.8 82 51.2
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 5.2e-11 71.2 55 69.1
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 3.4e-10 68.6 129 40.3
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 4.4e-10 68.2 99 42.4
Gohir.A07G024600 Gossypium hirsutum HOM05D007649 ORTHO05D009668 7.5e-10 67.4 70 52.9
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 2.2e-09 65.9 53 58.5
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.1e-08 63.5 56 58.9
Os05g0180700 Oryza sativa ssp. japonica HOM05D007649 ORTHO05D009668 4.1e-08 61.6 99 37.4
Actinidia14648 Actinidia chinensis HOM05D007649 ORTHO05D009668 6.6e-06 54.3 62 54.8


User provided reference genes

Program Settings