Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 8.4e-146 520.8 356 100.0
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.4e-36 156.0 340 37.9
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 9.0e-31 138.7 310 35.5
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.2e-28 130.2 310 34.5
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 7.1e-28 129.0 341 34.3
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 5.1e-26 122.9 320 32.8
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 5.6e-25 119.4 309 39.5
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 7.4e-25 119.0 336 31.8
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.8e-24 116.3 314 31.8
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 1.1e-23 115.2 318 34.0
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.8e-23 114.4 318 31.4
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 3.1e-23 113.6 324 32.1
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 3.1e-23 113.6 342 31.9
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 3.4e-22 110.2 339 29.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 5.8e-22 109.4 311 31.2
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 5.8e-22 109.4 339 30.4
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 5.8e-22 109.4 315 31.1
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 9.9e-22 108.6 322 31.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.3e-21 108.2 313 31.9
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 2.9e-21 107.1 315 31.1
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 2.9e-21 107.1 321 31.8
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 3.8e-21 106.7 321 39.3
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 4.9e-21 106.3 360 37.2
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.4e-20 104.8 317 31.9
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.4e-20 104.8 337 30.9
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.4e-20 104.8 320 32.8
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 2.4e-20 104.0 314 32.8
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.4e-20 104.0 312 30.8
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.2e-20 103.2 319 31.7
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 5.5e-20 102.8 314 30.6
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 7.1e-20 102.4 328 30.2
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 1.2e-19 101.7 344 31.7
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.2e-19 101.7 343 31.2
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 2.1e-19 100.9 316 28.5
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 2.7e-19 100.5 345 40.0
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 2.7e-19 100.5 320 28.8
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 4.6e-19 99.8 334 29.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 6.0e-19 99.4 312 31.4
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 7.9e-19 99.0 318 31.4
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 7.9e-19 99.0 353 28.9
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 1.0e-18 98.6 338 32.0
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 1.3e-18 98.2 325 29.8
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.3e-18 98.2 318 29.9
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 2.3e-18 97.4 133 49.6
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 2.3e-18 97.4 338 29.6
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 3.0e-18 97.1 345 30.1
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.0e-18 97.1 135 45.9
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 3.9e-18 96.7 332 30.1
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 3.9e-18 96.7 319 28.8
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 8.7e-18 95.5 334 27.2
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 8.7e-18 95.5 135 45.9
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.5e-17 94.7 331 29.0
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.5e-17 94.7 330 30.0
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 1.5e-17 94.7 318 30.8
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 1.9e-17 94.4 319 28.2
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 2.5e-17 94.0 313 28.8
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 2.5e-17 94.0 333 28.8
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 2.5e-17 94.0 133 41.4
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 4.3e-17 93.2 328 28.7
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 5.6e-17 92.8 325 36.3
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 5.6e-17 92.8 314 29.6
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 5.6e-17 92.8 138 44.2
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 7.4e-17 92.4 319 31.0
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 7.4e-17 92.4 327 28.1
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 9.6e-17 92.0 318 28.9
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 9.6e-17 92.0 334 29.0
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.3e-16 91.7 325 30.2
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.3e-16 91.7 332 29.2
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.6e-16 91.3 310 29.4
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.6e-16 91.3 138 44.2
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.1e-16 90.9 140 40.7
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.8e-16 90.5 343 28.9
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 2.8e-16 90.5 138 43.5
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 2.8e-16 90.5 340 28.8
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 3.7e-16 90.1 327 32.1
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 4.8e-16 89.7 136 44.9
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 4.8e-16 89.7 329 28.9
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 8.1e-16 89.0 310 27.4
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.1e-15 88.6 131 47.3
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.4e-15 88.2 317 29.7
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.4e-15 88.2 340 26.2
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.8e-15 87.8 132 42.4
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 2.4e-15 87.4 327 30.6
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.1e-15 87.0 317 29.7
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 3.1e-15 87.0 317 26.8
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 4.0e-15 86.7 316 30.4
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 5.3e-15 86.3 137 41.6
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 6.9e-15 85.9 317 27.4
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 9.0e-15 85.5 320 35.9
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 2.0e-14 84.3 131 39.7
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 2.0e-14 84.3 138 41.3
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 2.6e-14 84.0 318 31.1
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.6e-14 84.0 327 28.1
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 2.6e-14 84.0 133 39.1
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 3.4e-14 83.6 330 28.8
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 3.4e-14 83.6 131 37.4
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 4.5e-14 83.2 315 27.3
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 4.5e-14 83.2 326 31.6
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 4.5e-14 83.2 131 38.2
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 5.8e-14 82.8 319 28.5
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 5.8e-14 82.8 316 28.5
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 5.8e-14 82.8 137 42.3
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 7.6e-14 82.4 319 31.7
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 7.6e-14 82.4 319 31.7
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 7.6e-14 82.4 310 27.1
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.3e-13 81.6 322 28.6
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.3e-13 81.6 316 28.5
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.7e-13 81.3 344 27.9
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.7e-13 81.3 324 28.1
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 1.7e-13 81.3 316 28.5
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 1.7e-13 81.3 316 28.5
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.7e-13 81.3 138 42.0
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 2.2e-13 80.9 321 31.2
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.2e-13 80.9 323 27.6
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.2e-13 80.9 136 38.2
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 2.9e-13 80.5 317 29.0
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 2.9e-13 80.5 317 30.0
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 2.9e-13 80.5 322 29.5
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 3.8e-13 80.1 131 43.5
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 4.9e-13 79.7 133 42.1
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 6.5e-13 79.3 314 27.1
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 6.5e-13 79.3 314 27.1
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 6.5e-13 79.3 136 39.0
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 6.5e-13 79.3 140 39.3
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 8.4e-13 79.0 313 26.8
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 8.4e-13 79.0 340 27.4
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.1e-12 78.6 136 38.2
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 1.4e-12 78.2 326 28.8
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 1.4e-12 78.2 323 29.4
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 1.4e-12 78.2 326 27.3
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 2.5e-12 77.4 133 37.6
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 2.5e-12 77.4 314 26.8
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 3.2e-12 77.0 320 27.2
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 3.2e-12 77.0 335 29.3
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.2e-11 75.1 315 29.8
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 1.6e-11 74.7 136 37.5
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 1.6e-11 74.7 129 40.3
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.7e-11 73.9 311 26.0
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 3.5e-11 73.6 333 29.7
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 3.5e-11 73.6 330 26.7
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.5e-11 73.6 336 30.1
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 6.0e-11 72.8 135 36.3
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 6.0e-11 72.8 315 26.7
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 6.0e-11 72.8 319 28.2
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 7.9e-11 72.4 316 26.6
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 7.9e-11 72.4 134 35.1
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.3e-10 71.6 130 38.5
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.3e-10 71.6 311 26.0
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 1.8e-10 71.2 135 40.7
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 1.8e-10 71.2 135 33.3
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 2.3e-10 70.9 133 34.6
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 2.3e-10 70.9 316 31.3
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 3.0e-10 70.5 332 26.8
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 3.0e-10 70.5 311 28.3
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 5.1e-10 69.7 139 36.0
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 6.7e-10 69.3 132 37.9
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 6.7e-10 69.3 131 35.1
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 1.5e-09 68.2 139 40.3
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.5e-09 67.4 127 39.4
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 2.5e-09 67.4 316 28.8
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 3.3e-09 67.0 315 26.7
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 4.3e-09 66.6 310 26.8
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 9.6e-09 65.5 328 26.2
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.6e-08 64.7 343 25.9
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 4.8e-08 63.2 317 28.1
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 6.3e-08 62.8 321 24.0
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 2.4e-07 60.8 107 42.1
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 2.4e-07 60.8 107 42.1
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 4.1e-07 60.1 141 35.5
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 5.3e-07 59.7 127 32.3
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 5.3e-07 59.7 339 25.4
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 6.9e-07 59.3 91 46.2
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 6.9e-07 59.3 128 32.8
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.2e-06 58.5 126 32.5
Zm00001eb366780 Zea mays HOM05D039918 ORTHO05D003919 1.2e-06 58.5 130 35.4
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 1.5e-06 58.2 135 29.6
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 2.0e-06 57.8 317 25.6
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 4.5e-06 56.6 108 35.2
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 4.5e-06 56.6 320 25.6
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.0e-05 55.5 304 24.3


User provided reference genes

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