Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.7e-96 355.9 171 100.0
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.5e-84 316.2 171 88.3
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.4e-82 309.7 171 87.7
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 9.1e-82 307.0 171 86.5
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 9.1e-82 307.0 171 87.1
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 1.2e-81 306.6 166 88.0
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.7e-81 305.4 171 87.1
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.7e-81 305.4 171 87.1
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-80 303.1 171 85.4
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 1.7e-80 302.8 166 88.0
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.3e-80 302.4 166 87.3
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 6.6e-80 300.8 170 85.3
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 8.6e-80 300.4 167 85.6
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.5e-79 299.7 166 87.3
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.5e-79 298.9 171 84.2
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.3e-79 298.5 169 84.6
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 5.5e-79 297.7 165 86.7
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 5.5e-79 297.7 171 83.6
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 7.2e-79 297.4 170 85.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 7.2e-79 297.4 169 84.0
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 2.1e-78 295.8 171 83.0
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 8.0e-78 293.9 171 83.0
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.0e-77 293.5 169 84.6
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.4e-77 293.1 166 84.9
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.3e-77 292.4 169 83.4
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 171 83.0
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 3.0e-77 292.0 171 84.8
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 5.2e-77 291.2 169 84.0
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.2e-77 291.2 166 83.7
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 6.8e-77 290.8 169 82.2
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 6.8e-77 290.8 171 82.5
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 8.9e-77 290.4 167 84.4
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.2e-76 290.0 168 83.9
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.0e-76 289.3 171 83.0
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.0e-76 289.3 165 83.0
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.6e-76 288.9 167 84.4
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 3.4e-76 288.5 169 82.2
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.4e-76 288.5 167 83.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 4.4e-76 288.1 167 85.0
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.7e-76 287.7 172 83.1
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 7.5e-76 287.3 171 81.9
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 9.8e-76 287.0 170 82.4
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.3e-75 286.6 170 82.9
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.3e-75 286.6 169 81.1
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.7e-75 286.2 162 85.2
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.7e-75 286.2 166 83.1
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 3.7e-75 285.0 170 81.8
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 4.9e-75 284.6 165 84.2
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 8.3e-75 283.9 173 81.5
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 1.4e-74 283.1 166 83.7
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.8e-74 282.7 177 80.2
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.8e-74 282.7 170 81.2
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.4e-74 282.3 177 80.2
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 4.1e-74 281.6 170 80.6
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 4.1e-74 281.6 171 79.5
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 5.4e-74 281.2 152 89.5
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 7.0e-74 280.8 166 82.5
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 9.2e-74 280.4 165 83.0
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 9.2e-74 280.4 172 81.4
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.2e-73 280.0 170 79.4
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.2e-73 280.0 156 85.3
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 1.2e-73 280.0 166 82.5
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.6e-73 279.6 166 83.1
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 2.0e-73 279.3 171 80.1
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 4.5e-73 278.1 172 80.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 4.5e-73 278.1 156 85.3
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 5.9e-73 277.7 166 81.9
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.0e-72 276.9 166 80.1
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.0e-72 276.9 166 80.1
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.3e-72 275.8 170 80.0
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 8.6e-72 273.9 154 85.1
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.1e-71 273.5 166 80.1
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.5e-71 273.1 166 80.7
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.5e-71 273.1 162 82.7
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 1.9e-71 272.7 172 79.1
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.9e-71 272.7 171 77.8
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 2.5e-71 272.3 172 78.5
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 5.6e-71 271.2 152 85.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.8e-70 268.9 162 80.2
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 3.6e-70 268.5 165 79.4
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.0e-69 266.9 167 79.0
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.3e-69 265.8 160 80.0
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 2.3e-69 265.8 164 78.7
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 6.8e-69 264.2 171 78.9
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 8.9e-69 263.8 166 78.3
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.2e-68 263.5 169 75.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.2e-68 263.5 164 76.2
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.5e-68 263.1 191 71.7
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.5e-68 263.1 162 79.0
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 7.5e-68 260.8 166 78.9
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.7e-67 259.6 166 76.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.2e-67 259.2 156 78.2
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 3.7e-67 258.5 152 82.9
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.3e-67 257.3 171 74.9
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.1e-66 256.9 168 76.2
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 4.1e-66 255.0 164 74.4
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.7e-65 252.3 160 77.5
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 2.7e-65 252.3 186 68.3
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 4.6e-65 251.5 168 75.0
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 6.0e-65 251.1 160 76.9
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 7.8e-65 250.8 166 74.1
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 7.8e-65 250.8 169 73.4
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.7e-64 249.6 140 83.6
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.7e-64 249.6 140 83.6
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 5.0e-64 248.1 160 76.2
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.5e-63 245.7 166 73.5
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 2.2e-59 232.6 167 73.7
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.1e-58 230.3 122 86.9
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 2.4e-58 229.2 157 70.1
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 3.2e-58 228.8 316 44.0
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.4e-58 228.0 177 66.1
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.5e-55 219.2 143 77.6
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 3.3e-55 218.8 158 70.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 3.3e-55 218.8 152 69.7
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.7e-54 214.9 156 65.4
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 4.0e-53 211.8 142 73.2
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 6.8e-53 211.1 135 77.8
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.9e-50 203.0 110 85.5
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.0e-45 185.3 171 60.8
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 7.1e-42 174.5 309 38.8
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.1e-38 162.9 224 46.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 3.6e-38 162.2 210 47.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.0e-28 129.8 76 76.3
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.9e-28 127.5 85 80.0
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.9e-27 125.9 80 71.2
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 4.9e-27 125.2 67 88.1
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 1.1e-21 107.5 77 63.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 2.5e-15 86.3 42 85.7
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 5.3e-13 78.6 69 53.6
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 7.6e-12 74.7 89 44.9
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.4e-10 70.5 82 53.7
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.6e-09 65.5 140 34.3
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.7e-06 55.8 39 69.2


User provided reference genes

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