Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 2.0e-43 178.7 91 100.0
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 2.9e-18 95.1 91 61.5
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.9e-17 92.4 91 59.3
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.9e-17 92.4 91 59.3
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 1.9e-17 92.4 91 59.3
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 2.5e-17 92.0 91 62.6
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 7.2e-17 90.5 91 58.2
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.2e-16 89.7 92 60.9
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 2.7e-16 88.6 92 59.8
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 3.6e-16 88.2 90 61.1
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 1.4e-15 86.3 91 61.5
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 2.3e-15 85.5 90 64.4
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 2.3e-15 85.5 91 60.4
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 3.9e-15 84.7 91 56.0
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 5.1e-15 84.3 91 57.1
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 6.7e-15 84.0 93 53.8
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 2.5e-14 82.0 94 55.3
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 2.5e-14 82.0 93 60.2
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 2.2e-13 79.0 91 54.9
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 6.3e-13 77.4 88 53.4
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 6.3e-13 77.4 88 53.4
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 8.2e-13 77.0 91 54.9
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 1.8e-12 75.9 88 55.7
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 5.3e-12 74.3 96 51.0
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 1.2e-11 73.2 93 51.6
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 1.5e-11 72.8 76 57.9
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 1.5e-11 72.8 76 56.6
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 2.0e-11 72.4 87 54.0
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 2.6e-11 72.0 91 51.6
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 2.6e-11 72.0 76 57.9
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 2.6e-11 72.0 93 49.5
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 5.9e-11 70.9 93 48.4
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 1.0e-10 70.1 76 56.6
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 1.3e-10 69.7 87 52.9
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 2.9e-10 68.6 94 52.1
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 2.9e-10 68.6 87 52.9
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 6.5e-10 67.4 62 62.9
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 6.5e-10 67.4 56 66.1
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 2.5e-09 65.5 57 61.4
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 2.5e-09 65.5 87 52.9
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 9.4e-09 63.5 63 55.6
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 9.4e-09 63.5 85 49.4
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 9.4e-09 63.5 83 51.8
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 1.2e-08 63.2 69 60.9
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 7.9e-08 60.5 95 47.4
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 3.0e-07 58.5 76 50.0
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 3.0e-07 58.5 99 45.5
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 3.9e-07 58.2 73 45.2
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 3.9e-07 58.2 54 55.6
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 5.1e-07 57.8 90 46.7
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 5.1e-07 57.8 79 44.3
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 2.0e-06 55.8 66 48.5
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 2.6e-06 55.5 107 42.1
SEGI_32292 Sequoiadendron giganteum HOM05D008067 ORTHO05D010226 3.3e-06 55.1 87 39.1
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 4.4e-06 54.7 87 41.4
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 4.4e-06 54.7 78 47.4
Ciclev10010675m.g Citrus clementina HOM05D006736 ORTHO05D008459 5.7e-06 54.3 73 43.8
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 9.7e-06 53.5 40 60.0
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 9.7e-06 53.5 57 50.9


User provided reference genes

Program Settings