Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 8.3e-140 500.4 253 100.0
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.2e-87 326.2 281 61.2
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.1e-86 323.9 281 61.6
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.5e-85 318.5 278 60.8
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 7.7e-85 317.8 281 60.1
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 7.7e-85 317.8 281 59.8
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 5.0e-84 315.1 278 59.7
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.0e-84 315.1 278 60.1
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 5.0e-84 315.1 278 58.6
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 5.0e-84 315.1 278 58.6
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 6.5e-84 314.7 278 58.6
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.1e-83 313.9 278 57.9
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 1.4e-83 313.5 278 59.0
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 1.9e-83 313.2 278 58.3
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.2e-83 312.4 278 58.6
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.2e-83 312.0 278 59.7
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 5.5e-83 311.6 284 57.4
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 7.2e-83 311.2 281 58.7
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 7.2e-83 311.2 278 58.6
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 9.4e-83 310.8 278 57.9
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.2e-82 310.5 278 58.3
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 1.2e-82 310.5 278 59.4
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 1.6e-82 310.1 278 57.9
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 1.6e-82 310.1 281 58.0
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 2.1e-82 309.7 278 57.6
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 2.7e-82 309.3 278 58.6
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 2.7e-82 309.3 278 57.6
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 2.7e-82 309.3 278 59.0
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 3.6e-82 308.9 278 57.9
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.6e-82 308.9 278 57.9
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.6e-82 308.9 278 57.6
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 3.6e-82 308.9 278 56.8
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 3.6e-82 308.9 281 58.4
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 4.6e-82 308.5 278 59.0
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 4.6e-82 308.5 278 59.4
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 4.6e-82 308.5 278 59.4
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 4.6e-82 308.5 278 57.9
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 6.1e-82 308.1 278 57.9
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 6.1e-82 308.1 278 57.6
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 6.1e-82 308.1 278 59.7
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 6.1e-82 308.1 278 59.0
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 6.1e-82 308.1 278 58.3
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 7.9e-82 307.8 281 57.7
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 7.9e-82 307.8 278 57.6
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 7.9e-82 307.8 278 58.3
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 7.9e-82 307.8 278 59.0
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.0e-81 307.4 277 57.8
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 1.4e-81 307.0 278 58.3
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.4e-81 307.0 278 58.6
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 1.8e-81 306.6 278 57.9
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 1.8e-81 306.6 278 57.9
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 1.8e-81 306.6 278 57.9
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 1.8e-81 306.6 278 58.6
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 2.3e-81 306.2 278 57.6
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 2.3e-81 306.2 278 58.6
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 2.3e-81 306.2 278 57.9
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 3.0e-81 305.8 278 57.6
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 3.0e-81 305.8 278 58.3
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 3.0e-81 305.8 278 57.2
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.9e-81 305.4 279 58.8
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 3.9e-81 305.4 278 57.6
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 5.1e-81 305.1 278 57.9
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 5.1e-81 305.1 278 57.9
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 5.1e-81 305.1 278 57.2
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 5.1e-81 305.1 278 58.3
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 5.1e-81 305.1 281 57.3
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 6.7e-81 304.7 278 57.9
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 6.7e-81 304.7 281 56.6
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 8.8e-81 304.3 278 57.2
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 8.8e-81 304.3 278 56.8
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 1.1e-80 303.9 278 57.9
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 1.5e-80 303.5 278 57.2
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.5e-80 303.5 281 56.9
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 2.0e-80 303.1 278 57.6
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 2.6e-80 302.8 278 57.6
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 3.3e-80 302.4 278 57.2
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 3.3e-80 302.4 281 55.2
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 3.3e-80 302.4 278 56.5
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 4.4e-80 302.0 281 55.5
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 4.4e-80 302.0 278 56.5
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 5.7e-80 301.6 278 56.8
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 5.7e-80 301.6 278 58.3
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 5.7e-80 301.6 278 56.8
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 7.4e-80 301.2 278 56.5
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 7.4e-80 301.2 278 57.2
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 7.4e-80 301.2 278 57.2
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 1.3e-79 300.4 280 56.4
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 1.3e-79 300.4 281 57.3
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 1.3e-79 300.4 280 56.8
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 1.7e-79 300.1 281 56.9
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 2.2e-79 299.7 286 55.2
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.8e-79 299.3 281 56.2
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 2.8e-79 299.3 281 55.9
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 2.8e-79 299.3 278 55.4
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 3.7e-79 298.9 283 55.5
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 3.7e-79 298.9 278 55.4
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 4.8e-79 298.5 278 55.8
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 4.8e-79 298.5 278 55.8
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 4.8e-79 298.5 278 55.8
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 4.8e-79 298.5 278 56.1
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 6.3e-79 298.1 281 55.9
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 6.3e-79 298.1 278 55.0
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 6.3e-79 298.1 278 55.0
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 6.3e-79 298.1 278 55.0
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 6.3e-79 298.1 278 55.0
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 6.3e-79 298.1 278 55.0
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 8.2e-79 297.7 278 55.0
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 1.4e-78 297.0 278 54.7
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 1.8e-78 296.6 278 55.0
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 2.4e-78 296.2 278 54.7
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 2.4e-78 296.2 281 54.8
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 3.1e-78 295.8 278 54.3
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 3.1e-78 295.8 278 55.8
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 6.9e-78 294.7 280 56.4
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 9.1e-78 294.3 278 55.8
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 1.5e-77 293.5 283 54.4
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 2.6e-77 292.7 278 56.1
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 3.4e-77 292.4 283 54.8
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 3.4e-77 292.4 278 56.1
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 5.9e-77 291.6 278 53.6
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 2.2e-76 289.7 283 53.0
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 2.2e-76 289.7 281 54.1
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 3.8e-76 288.9 278 55.4
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 1.1e-75 287.3 277 53.8
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 1.9e-75 286.6 270 56.3
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.3e-73 279.6 282 55.3
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 3.0e-73 279.3 280 53.9
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 3.9e-73 278.9 284 51.8
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 1.1e-72 277.3 278 54.3
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.6e-72 276.2 257 58.8
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 9.7e-72 274.2 278 55.0
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.4e-70 270.4 282 53.2
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.4e-70 269.6 279 54.1
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.4e-70 269.6 279 53.8
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.3e-70 268.5 279 54.1
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.0e-70 268.1 282 53.2
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.0e-70 268.1 280 54.3
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-69 266.9 283 52.7
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-69 266.9 285 51.9
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.6e-69 266.2 274 54.4
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 3.5e-69 265.8 253 56.1
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.5e-69 265.8 282 52.5
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.5e-69 265.4 279 51.6
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.7e-69 264.6 284 50.4
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 7.7e-69 264.6 276 50.4
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.2e-68 263.1 279 53.4
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 8.5e-68 261.2 279 50.9
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 3.2e-67 259.2 282 51.8
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 9.4e-67 257.7 279 52.0
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 2.1e-66 256.5 247 57.5
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 4.7e-66 255.4 275 51.6
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 8.0e-66 254.6 279 52.7
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 2.0e-64 250.0 277 50.2
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.7e-61 239.6 288 49.3
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 7.7e-53 211.5 247 50.6
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.7e-53 211.5 227 52.0
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.9e-51 206.8 251 49.0
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 2.2e-47 193.4 178 57.3
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 7.0e-46 188.3 152 62.5
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 1.8e-38 163.7 274 39.1
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 5.6e-35 152.1 274 37.6
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 3.4e-32 142.9 107 64.5
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 1.3e-31 141.0 132 53.0
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.6e-26 124.0 138 51.4
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 1.1e-25 121.3 153 45.8
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 2.2e-23 113.6 149 41.6
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 1.4e-22 110.9 160 38.1
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.0e-20 104.8 273 31.5
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 3.0e-20 103.2 119 47.9
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 3.9e-20 102.8 86 60.5
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 5.6e-19 99.0 216 30.1
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 1.6e-18 97.4 273 28.6
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 6.8e-17 92.0 91 53.8
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 2.0e-16 90.5 152 36.8
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 2.6e-16 90.1 152 36.8
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 4.4e-16 89.4 161 34.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.4e-14 84.3 60 63.3
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 1.7e-12 77.4 126 38.1
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 3.0e-12 76.6 60 56.7
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 5.1e-12 75.9 90 47.8
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.1e-09 68.2 58 56.9
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 5.8e-08 62.4 60 48.3


User provided reference genes

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