Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 2.2e-160 568.9 298 100.0
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 3.1e-85 319.3 391 52.4
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 7.2e-50 201.8 389 36.0
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 7.2e-50 201.8 389 35.7
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 1.2e-44 184.5 374 36.1
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 2.9e-43 179.9 340 37.6
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.8e-43 179.5 373 35.9
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 6.5e-43 178.7 363 35.8
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.1e-42 177.9 373 35.7
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 5.5e-42 175.6 379 34.8
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 5.5e-42 175.6 391 33.8
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 1.2e-41 174.5 382 34.8
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 1.6e-41 174.1 384 32.6
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 2.7e-41 173.3 381 34.1
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 2.3e-40 170.2 389 34.2
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 1.5e-39 167.5 388 34.8
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.7e-38 164.1 368 33.7
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 1.2e-36 157.9 389 32.9
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 5.9e-36 155.6 343 34.4
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.3e-35 154.5 343 34.1
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.9e-35 153.3 389 32.1
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 1.6e-33 147.5 392 29.8
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 4.7e-33 146.0 375 31.7
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 6.1e-33 145.6 374 30.7
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 8.0e-33 145.2 374 29.9
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 1.4e-32 144.4 390 31.8
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.8e-32 144.1 326 34.0
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 2.3e-32 143.7 374 31.6
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 2.3e-32 143.7 386 30.3
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 4.0e-32 142.9 390 29.7
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.5e-31 141.0 374 30.2
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 2.0e-31 140.6 385 30.6
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 3.4e-31 139.8 393 32.3
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 4.4e-31 139.4 379 30.3
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 7.5e-31 138.7 388 29.4
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 9.8e-31 138.3 389 31.1
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 1.3e-30 137.9 385 30.1
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 1.7e-30 137.5 374 29.9
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 2.2e-30 137.1 388 30.2
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 6.4e-30 135.6 374 30.5
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 1.8e-29 134.0 382 29.8
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 3.2e-29 133.3 374 29.9
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 9.2e-29 131.7 324 32.7
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.2e-28 131.3 487 27.1
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.7e-28 130.2 386 29.8
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 3.5e-28 129.8 388 28.4
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 7.8e-28 128.6 382 27.2
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 1.3e-27 127.9 375 29.1
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.7e-27 127.5 373 28.4
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 2.3e-27 127.1 425 27.8
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.3e-27 127.1 401 28.4
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 2.3e-27 127.1 379 27.7
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 7.3e-26 122.1 357 28.6
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 7.3e-26 122.1 389 29.3
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 1.2e-25 121.3 381 27.6
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 1.2e-25 121.3 359 28.1
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 2.1e-25 120.6 374 29.7
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 2.8e-25 120.2 375 30.4
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 2.8e-25 120.2 392 28.6
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 6.2e-25 119.0 358 28.2
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.0e-24 118.2 388 26.8
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 1.8e-24 117.5 389 27.5
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 1.8e-24 117.5 393 30.0
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 3.1e-24 116.7 363 28.9
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 3.1e-24 116.7 367 28.9
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 1.2e-23 114.8 357 26.3
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.2e-23 114.8 373 27.1
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 1.2e-23 114.8 321 28.7
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.2e-23 114.8 390 25.9
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 1.5e-23 114.4 167 43.7
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 2.0e-23 114.0 375 28.0
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 2.0e-23 114.0 376 26.6
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.0e-23 114.0 389 28.5
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 4.4e-23 112.8 352 28.7
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 7.5e-23 112.1 356 27.2
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 9.8e-23 111.7 375 28.3
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 9.8e-23 111.7 375 28.3
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 1.7e-22 110.9 317 28.7
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 2.9e-22 110.2 373 27.3
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 3.7e-22 109.8 310 32.3
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 3.7e-22 109.8 349 28.7
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 6.4e-22 109.0 354 28.2
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.1e-21 108.2 352 27.3
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.1e-21 108.2 363 27.3
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 3.2e-21 106.7 365 26.3
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 3.2e-21 106.7 312 29.2
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 9.2e-21 105.1 374 24.9
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 1.2e-20 104.8 345 27.0
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.2e-20 104.8 345 27.0
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 1.6e-20 104.4 391 26.6
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 2.7e-20 103.6 187 36.9
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 4.6e-20 102.8 172 35.5
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 4.6e-20 102.8 179 37.4
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 7.8e-20 102.1 357 26.3
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 3.0e-19 100.1 375 26.4
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 3.9e-19 99.8 395 27.8
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 5.0e-19 99.4 161 40.4
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 5.6e-18 95.9 188 34.6
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 7.3e-18 95.5 405 26.9
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 7.3e-18 95.5 392 24.7
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 9.5e-18 95.1 168 34.5
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 1.2e-17 94.7 404 26.0
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.6e-17 94.4 391 26.3
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 1.8e-16 90.9 364 25.0
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 1.8e-16 90.9 306 31.0
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.3e-16 90.5 379 25.1
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 4.0e-16 89.7 374 25.4
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 5.2e-16 89.4 313 25.6
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 5.2e-16 89.4 175 34.3
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.2e-15 88.2 384 25.0
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 5.8e-15 85.9 352 28.1
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 7.5e-15 85.5 210 34.3
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 2.2e-14 84.0 185 35.1
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 1.9e-13 80.9 325 28.6
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.4e-13 80.5 330 28.2
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 4.1e-13 79.7 377 24.9
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 5.4e-13 79.3 318 28.6
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 1.2e-12 78.2 306 26.5
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.7e-12 77.0 157 36.9
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 3.5e-12 76.6 207 29.5
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 7.8e-12 75.5 299 25.4
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.7e-11 74.3 261 25.7
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 8.6e-11 72.0 136 39.7
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.1e-10 71.6 86 37.2
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.6e-09 67.8 139 26.6
MBI08_g15045_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 3.1e-08 63.5 96 44.8
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.0e-08 63.2 159 30.2
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 7.6e-07 58.9 167 29.3
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.3e-06 58.2 341 22.3
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 2.9e-06 57.0 86 40.7
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.9e-06 57.0 153 28.8
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 6.4e-06 55.8 48 54.2
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 8.4e-06 55.5 102 31.4


User provided reference genes

Program Settings