Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 8.9e-162 573.5 291 100.0
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 2.5e-124 449.1 291 74.2
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 4.5e-121 438.3 293 72.0
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.5e-119 432.6 295 71.2
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.5e-119 431.4 295 70.8
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 3.5e-118 428.7 293 70.3
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 3.5e-118 428.7 293 70.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 6.0e-118 427.9 296 71.6
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 7.9e-118 427.6 295 71.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 6.7e-117 424.5 295 72.2
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 8.2e-115 417.5 293 71.7
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 2.4e-114 416.0 290 68.6
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 9.0e-114 414.1 296 69.3
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 9.0e-114 414.1 294 68.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 9.0e-114 414.1 293 70.3
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.7e-112 409.8 295 69.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.9e-112 409.1 295 68.8
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.5e-112 407.5 294 69.4
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-111 407.1 273 72.9
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.4e-111 406.8 294 69.0
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.9e-111 406.4 303 65.3
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.9e-111 406.4 295 69.2
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.5e-111 406.0 294 70.4
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.5e-111 406.0 296 67.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 3.2e-111 405.6 295 67.5
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.2e-111 405.6 293 67.9
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 9.4e-111 404.1 293 68.6
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 9.4e-111 404.1 304 66.1
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.2e-110 403.7 295 67.1
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.6e-110 403.3 294 71.4
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-110 402.9 295 68.8
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.7e-110 402.5 308 65.9
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.6e-110 401.7 293 67.2
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 4.6e-110 401.7 291 67.0
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 7.9e-110 401.0 281 70.1
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.0e-109 400.6 293 67.6
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.4e-109 400.2 294 68.4
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.8e-109 399.8 305 65.2
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 2.3e-109 399.4 293 66.9
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.9e-109 398.7 304 65.5
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 3.9e-109 398.7 308 64.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 8.8e-109 397.5 293 66.6
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 8.8e-109 397.5 291 68.0
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 8.8e-109 397.5 301 64.1
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.1e-108 397.1 300 66.0
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 2.0e-108 396.4 308 64.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.5e-108 396.0 293 66.9
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.3e-107 393.7 297 65.0
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 1.3e-107 393.7 283 66.8
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 6.3e-107 391.3 276 67.8
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 8.2e-107 391.0 290 67.2
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.4e-106 390.2 293 64.5
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.4e-106 390.2 295 66.4
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.1e-106 387.5 292 65.4
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 9.1e-106 387.5 297 64.3
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 9.1e-106 387.5 295 65.8
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.2e-105 387.1 279 66.7
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.5e-105 386.7 317 63.1
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.5e-105 386.7 275 69.5
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.0e-105 386.3 300 63.3
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.6e-105 386.0 291 66.3
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 4.5e-105 385.2 275 70.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 1.7e-104 383.3 291 66.7
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 2.2e-104 382.9 291 64.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.8e-104 382.1 243 76.5
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 5.0e-104 381.7 311 62.1
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 6.5e-104 381.3 305 61.6
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 8.5e-104 380.9 294 65.6
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.4e-103 380.2 291 64.9
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.9e-103 379.8 292 66.1
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 3.2e-103 379.0 291 64.9
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 3.2e-103 379.0 290 65.5
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 7.2e-103 377.9 291 65.3
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 2.1e-102 376.3 294 63.9
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 2.1e-102 376.3 294 63.6
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 2.7e-102 375.9 280 66.4
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 4.7e-102 375.2 290 65.2
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.7e-102 375.2 298 66.1
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.0e-101 374.0 291 64.6
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.4e-101 373.6 302 61.3
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 8.8e-101 370.9 277 68.6
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.5e-100 370.2 292 64.4
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.5e-100 370.2 293 63.8
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.0e-100 369.8 371 52.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.4e-100 368.6 285 64.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.7e-99 366.7 291 63.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.2e-99 366.3 292 63.7
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 2.8e-99 365.9 289 63.0
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 8.2e-99 364.4 277 68.2
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.8e-98 363.2 299 63.5
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 2.4e-98 362.8 293 62.8
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.1e-98 362.5 279 65.6
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 5.3e-98 361.7 293 62.8
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 1.2e-97 360.5 293 63.1
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 1.2e-97 360.5 293 63.1
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 5.0e-96 355.1 446 46.0
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 5.5e-95 351.7 269 65.8
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.6e-94 349.0 293 62.5
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.7e-94 348.6 293 63.1
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.3e-93 346.3 292 61.3
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 3.5e-89 332.4 293 59.0
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.1e-87 327.4 253 66.4
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 4.8e-83 312.0 282 58.2
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.1e-82 310.8 259 60.6
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.4e-82 310.5 287 57.1
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 4.1e-82 308.9 256 63.3
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.8e-80 302.4 297 53.9
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.8e-77 293.5 194 72.2
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.2e-77 292.0 208 68.3
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.8e-77 291.6 204 67.6
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.3e-75 287.3 298 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 3.1e-74 282.7 274 53.3
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 5.5e-71 271.9 269 53.5
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.6e-70 270.4 292 49.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.6e-70 269.2 270 51.9
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 6.1e-70 268.5 275 53.5
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.0e-70 268.1 292 49.3
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.4e-69 267.3 274 51.8
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 5.2e-69 265.4 164 75.0
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 2.8e-67 259.6 271 48.7
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-64 251.1 168 73.2
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 1.0e-61 241.1 251 54.6
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.0e-61 241.1 273 50.2
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-61 240.7 168 70.8
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 2.0e-60 236.9 270 48.5
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 5.6e-55 218.8 169 69.2
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 5.4e-50 202.2 265 46.8
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 8.6e-48 194.9 210 53.8
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.6e-39 164.9 117 68.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.0e-32 144.8 139 56.8
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.8e-30 136.7 133 50.4
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 3.0e-16 90.1 77 59.7
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-13 81.6 125 38.4
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 2.1e-09 67.4 239 30.1
CBR_g36838 Chara braunii HOM05D005681 ORTHO05D007274 6.2e-06 55.8 115 31.3


User provided reference genes

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